Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.484e-10■□□□□ 8.4
MATR3P43243 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.454e-10■□□□□ 8.4
MATR3P43243 SSFA2-208ENST00000454579 3772 ntTSL 212.09□□□□□ -0.474e-10■□□□□ 8.4
MATR3P43243 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.664e-10■□□□□ 8.4
MATR3P43243 SSFA2-206ENST00000440623 5420 ntTSL 28.49□□□□□ -1.054e-10■□□□□ 8.4
MATR3P43243 SSFA2-204ENST00000416081 5067 ntTSL 1 (best)8.21□□□□□ -1.14e-10■□□□□ 8.4
MATR3P43243 SSFA2-213ENST00000491720 6473 ntTSL 27.09□□□□□ -1.274e-10■□□□□ 8.4
MATR3P43243 SSFA2-214ENST00000491866 718 ntTSL 55.85□□□□□ -1.474e-10■□□□□ 8.4
MATR3P43243 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.16■■□□□ 1.461e-323■□□□□ 8.4
MATR3P43243 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.741e-323■□□□□ 8.4
MATR3P43243 SRRM2-228ENST00000576878 1141 ntTSL 219.1■□□□□ 0.651e-323■□□□□ 8.4
MATR3P43243 SRRM2-220ENST00000574593 1440 ntTSL 317.29■□□□□ 0.361e-323■□□□□ 8.4
MATR3P43243 SRRM2-204ENST00000570705 675 ntTSL 316.8■□□□□ 0.281e-323■□□□□ 8.4
MATR3P43243 SRRM2-206ENST00000571041 498 ntTSL 416.6■□□□□ 0.251e-323■□□□□ 8.4
MATR3P43243 SRRM2-213ENST00000573311 732 ntTSL 216.25■□□□□ 0.191e-323■□□□□ 8.4
MATR3P43243 SRRM2-211ENST00000572883 887 ntTSL 211.66□□□□□ -0.541e-323■□□□□ 8.4
MATR3P43243 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.23■■□□□ 1.632e-7■□□□□ 8.3
MATR3P43243 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.292e-7■□□□□ 8.3
MATR3P43243 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.27■■□□□ 1.162e-7■□□□□ 8.3
MATR3P43243 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.2■□□□□ 0.982e-7■□□□□ 8.3
MATR3P43243 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.872e-7■□□□□ 8.3
MATR3P43243 GMPPA-207ENST00000443704 1783 ntTSL 518.97■□□□□ 0.632e-7■□□□□ 8.3
MATR3P43243 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.622e-7■□□□□ 8.3
MATR3P43243 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.522e-7■□□□□ 8.3
MATR3P43243 GK-202ENST00000378941 458 ntTSL 3 BASIC16.7■□□□□ 0.262e-7■□□□□ 8.3
MATR3P43243 GMPPA-211ENST00000481170 4942 ntTSL 214.68□□□□□ -0.062e-7■□□□□ 8.3
MATR3P43243 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.12e-7■□□□□ 8.3
MATR3P43243 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.182e-7■□□□□ 8.3
MATR3P43243 C20orf96-201ENST00000360321 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.382e-7■□□□□ 8.3
MATR3P43243 GMPPA-206ENST00000435316 786 ntTSL 512.42□□□□□ -0.422e-7■□□□□ 8.3
MATR3P43243 GMPPA-214ENST00000635609 569 ntTSL 511.8□□□□□ -0.522e-7■□□□□ 8.3
MATR3P43243 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.261e-41■□□□□ 8.3
MATR3P43243 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.551e-41■□□□□ 8.3
MATR3P43243 FGL1-205ENST00000427924 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.861e-41■□□□□ 8.3
MATR3P43243 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.911e-41■□□□□ 8.3
MATR3P43243 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.981e-41■□□□□ 8.3
MATR3P43243 FGL1-207ENST00000518769 318 ntTSL 36.72□□□□□ -1.331e-41■□□□□ 8.3
MATR3P43243 IPO9-203ENST00000464348 838 ntTSL 529.28■■■□□ 2.283e-7■□□□□ 8.3
MATR3P43243 NUP214-226ENST00000531600 1775 ntTSL 213.04□□□□□ -0.323e-7■□□□□ 8.3
MATR3P43243 NUP214-204ENST00000453861 3208 ntTSL 511.24□□□□□ -0.613e-7■□□□□ 8.3
MATR3P43243 NUP214-205ENST00000465486 1068 ntTSL 1 (best)9.64□□□□□ -0.873e-7■□□□□ 8.3
MATR3P43243 NUP214-206ENST00000470765 620 ntTSL 59.64□□□□□ -0.873e-7■□□□□ 8.3
MATR3P43243 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.933e-7■□□□□ 8.3
MATR3P43243 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.66□□□□□ -1.023e-7■□□□□ 8.3
MATR3P43243 IPO9-204ENST00000479374 704 ntTSL 38.65□□□□□ -1.023e-7■□□□□ 8.3
MATR3P43243 NUP214-218ENST00000528114 575 ntTSL 48.65□□□□□ -1.023e-7■□□□□ 8.3
MATR3P43243 NUP214-213ENST00000525384 840 ntTSL 1 (best)7.13□□□□□ -1.273e-7■□□□□ 8.3
MATR3P43243 NUP214-212ENST00000524578 524 ntTSL 32.02□□□□□ -2.093e-7■□□□□ 8.3
MATR3P43243 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.055e-6■□□□□ 8.2
MATR3P43243 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.03■■■□□ 2.088e-6■□□□□ 8.2
MATR3P43243 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.638e-6■□□□□ 8.2
MATR3P43243 CTBP1-205ENST00000504092 920 ntTSL 520.65■□□□□ 0.98e-6■□□□□ 8.2
MATR3P43243 CTBP1-208ENST00000506180 843 ntTSL 520■□□□□ 0.798e-6■□□□□ 8.2
MATR3P43243 CTBP1-207ENST00000505826 657 ntTSL 518.8■□□□□ 0.68e-6■□□□□ 8.2
MATR3P43243 CTBP1-216ENST00000514669 809 ntTSL 318.8■□□□□ 0.68e-6■□□□□ 8.2
MATR3P43243 CTBP1-210ENST00000510739 774 ntTSL 317.43■□□□□ 0.388e-6■□□□□ 8.2
MATR3P43243 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.17■□□□□ 0.661e-6■□□□□ 8.2
MATR3P43243 SCP2-214ENST00000528809 570 ntTSL 518.72■□□□□ 0.591e-6■□□□□ 8.2
MATR3P43243 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.35■□□□□ 0.531e-6■□□□□ 8.2
MATR3P43243 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.93■□□□□ 0.461e-6■□□□□ 8.2
MATR3P43243 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.88■□□□□ 0.451e-6■□□□□ 8.2
MATR3P43243 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.36■□□□□ 0.211e-6■□□□□ 8.2
MATR3P43243 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.071e-6■□□□□ 8.2
MATR3P43243 SCP2-210ENST00000478631 5204 ntTSL 213.86□□□□□ -0.191e-6■□□□□ 8.2
MATR3P43243 ZNF192P1-204ENST00000570042 640 ntTSL 38.07□□□□□ -1.121e-6■□□□□ 8.2
MATR3P43243 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.8□□□□□ -1.321e-6■□□□□ 8.2
MATR3P43243 LPIN2-204ENST00000584915 491 ntTSL 36.26□□□□□ -1.411e-6■□□□□ 8.2
MATR3P43243 SCP2-215ENST00000529363 720 ntTSL 56.11□□□□□ -1.431e-6■□□□□ 8.2
MATR3P43243 ANKRD17-206ENST00000514252 3259 ntTSL 25.62□□□□□ -1.511e-6■□□□□ 8.2
MATR3P43243 ZNF192P1-202ENST00000562227 1113 ntTSL 35.18□□□□□ -1.581e-6■□□□□ 8.2
MATR3P43243 MEMO1-206ENST00000422936 327 ntTSL 52.54□□□□□ -21e-6■□□□□ 8.2
MATR3P43243 GPR75-ASB3-202ENST00000459916 556 ntTSL 426.12■■□□□ 1.773e-7■□□□□ 8.1
MATR3P43243 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)24.78■■□□□ 1.563e-7■□□□□ 8.1
MATR3P43243 KIF1C-204ENST00000574165 799 ntTSL 521.99■■□□□ 1.113e-7■□□□□ 8.1
MATR3P43243 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.13e-7■□□□□ 8.1
MATR3P43243 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.833e-7■□□□□ 8.1
MATR3P43243 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.63■□□□□ 0.733e-7■□□□□ 8.1
MATR3P43243 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.723e-7■□□□□ 8.1
MATR3P43243 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.363e-7■□□□□ 8.1
MATR3P43243 HDAC4-213ENST00000496347 995 ntTSL 317.16■□□□□ 0.343e-7■□□□□ 8.1
MATR3P43243 ACTN4-211ENST00000589528 441 ntTSL 216.63■□□□□ 0.253e-7■□□□□ 8.1
MATR3P43243 PHACTR4-205ENST00000632202 918 ntTSL 516.14■□□□□ 0.173e-7■□□□□ 8.1
MATR3P43243 PHACTR4-209ENST00000633371 597 ntTSL 315.47■□□□□ 0.073e-7■□□□□ 8.1
MATR3P43243 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.21■□□□□ 0.033e-7■□□□□ 8.1
MATR3P43243 PHACTR4-203ENST00000463428 1421 ntTSL 1 (best)15.14■□□□□ 0.013e-7■□□□□ 8.1
MATR3P43243 PHACTR4-206ENST00000632421 3375 ntTSL 213.3□□□□□ -0.283e-7■□□□□ 8.1
MATR3P43243 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.333e-7■□□□□ 8.1
MATR3P43243 PHACTR4-204ENST00000493669 3078 ntTSL 1 (best)11.61□□□□□ -0.553e-7■□□□□ 8.1
MATR3P43243 ACTN4-207ENST00000495553 586 ntTSL 510.39□□□□□ -0.753e-7■□□□□ 8.1
MATR3P43243 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC10.23□□□□□ -0.773e-7■□□□□ 8.1
MATR3P43243 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC9.89□□□□□ -0.833e-7■□□□□ 8.1
MATR3P43243 UBE2N-203ENST00000549490 676 ntTSL 29.61□□□□□ -0.873e-7■□□□□ 8.1
MATR3P43243 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.96□□□□□ -1.33e-7■□□□□ 8.1
MATR3P43243 NRIP1-204ENST00000411932 720 ntTSL 35.7□□□□□ -1.52e-8■□□□□ 8.1
MATR3P43243 PICALM-213ENST00000530542 905 ntTSL 54.93□□□□□ -1.621e-9■□□□□ 8.1
MATR3P43243 FARP1-205ENST00000457029 602 ntTSL 59.35□□□□□ -0.918e-22■□□□□ 8.1
MATR3P43243 SLC13A3-206ENST00000420568 1256 ntTSL 517.66■□□□□ 0.424e-12■□□□□ 8.1
MATR3P43243 SLC13A3-207ENST00000450298 707 ntTSL 36.77□□□□□ -1.334e-12■□□□□ 8.1
MATR3P43243 FAM208B-205ENST00000473789 506 ntTSL 526.29■■□□□ 1.81e-5■□□□□ 8
MATR3P43243 FAM208B-210ENST00000496681 522 ntTSL 325.69■■□□□ 1.71e-5■□□□□ 8
Retrieved 100 of 16,209 protein–RNA pairs in 382.9 ms