RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 NISCHQ9Y2I1 1504 aa26.37■■□□□ 1.81
PHACTR4-206ENST00000632421 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
PHACTR4-206ENST00000632421 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
PHACTR4-206ENST00000632421 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.11
PHACTR4-206ENST00000632421 DCAF8L2P0C7V8 631 aa21.75■■□□□ 1.07
PHACTR4-206ENST00000632421 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
PHACTR4-206ENST00000632421 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
PHACTR4-206ENST00000632421 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
PHACTR4-206ENST00000632421 ABCC9O60706 1549 aa21.12■□□□□ 0.97
PHACTR4-206ENST00000632421 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
PHACTR4-206ENST00000632421 NACADO15069 1562 aa21.03■□□□□ 0.96
PHACTR4-206ENST00000632421 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
PHACTR4-206ENST00000632421 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
PHACTR4-206ENST00000632421 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
PHACTR4-206ENST00000632421 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
PHACTR4-206ENST00000632421 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
PHACTR4-206ENST00000632421 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
PHACTR4-206ENST00000632421 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
PHACTR4-206ENST00000632421 WIZO95785 1651 aa20.3■□□□□ 0.84
PHACTR4-206ENST00000632421 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
PHACTR4-206ENST00000632421 BICRAQ9NZM4 1560 aa20.14■□□□□ 0.81
PHACTR4-206ENST00000632421 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
PHACTR4-206ENST00000632421 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
PHACTR4-206ENST00000632421 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
PHACTR4-206ENST00000632421 LOC105371045A0A1W2PR82 267 aa20.02■□□□□ 0.8
PHACTR4-206ENST00000632421 EIF4G1Q04637 1599 aaKnown RBP19.94■□□□□ 0.78
PHACTR4-206ENST00000632421 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
PHACTR4-206ENST00000632421 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.78
PHACTR4-206ENST00000632421 PEG3Q9GZU2 1588 aa19.85■□□□□ 0.77
PHACTR4-206ENST00000632421 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
PHACTR4-206ENST00000632421 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
PHACTR4-206ENST00000632421 ABCC8Q09428 1581 aa19.68■□□□□ 0.74
PHACTR4-206ENST00000632421 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
PHACTR4-206ENST00000632421 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
PHACTR4-206ENST00000632421 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
PHACTR4-206ENST00000632421 HRCP23327 699 aa19.49■□□□□ 0.71
PHACTR4-206ENST00000632421 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
PHACTR4-206ENST00000632421 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
PHACTR4-206ENST00000632421 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
PHACTR4-206ENST00000632421 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
PHACTR4-206ENST00000632421 SOGA1O94964 1423 aa19.42■□□□□ 0.7
PHACTR4-206ENST00000632421 EEA1Q15075 1411 aa19.42■□□□□ 0.7
PHACTR4-206ENST00000632421 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
PHACTR4-206ENST00000632421 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
PHACTR4-206ENST00000632421 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
PHACTR4-206ENST00000632421 TNIKQ9UKE5 1360 aa19.24■□□□□ 0.67
PHACTR4-206ENST00000632421 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
PHACTR4-206ENST00000632421 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
PHACTR4-206ENST00000632421 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
PHACTR4-206ENST00000632421 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
PHACTR4-206ENST00000632421 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
PHACTR4-206ENST00000632421 CFTRP13569 1480 aa19.15■□□□□ 0.66
PHACTR4-206ENST00000632421 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
PHACTR4-206ENST00000632421 KIF21BO75037 1637 aa19.15■□□□□ 0.66
PHACTR4-206ENST00000632421 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
PHACTR4-206ENST00000632421 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
PHACTR4-206ENST00000632421 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
PHACTR4-206ENST00000632421 CUX1P39880 1505 aa19.06■□□□□ 0.64
PHACTR4-206ENST00000632421 RAPGEF2Q9Y4G8 1499 aa18.99■□□□□ 0.63
PHACTR4-206ENST00000632421 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
PHACTR4-206ENST00000632421 ZEB1P37275 1124 aaPredicted RBP18.95■□□□□ 0.62
PHACTR4-206ENST00000632421 CLIP1P30622 1438 aa18.94■□□□□ 0.62
PHACTR4-206ENST00000632421 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
PHACTR4-206ENST00000632421 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
PHACTR4-206ENST00000632421 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
PHACTR4-206ENST00000632421 TTBK1Q5TCY1 1321 aaPredicted RBP18.85■□□□□ 0.61
PHACTR4-206ENST00000632421 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.61
PHACTR4-206ENST00000632421 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
PHACTR4-206ENST00000632421 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
PHACTR4-206ENST00000632421 CUX2O14529 1486 aa18.77■□□□□ 0.59
PHACTR4-206ENST00000632421 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
PHACTR4-206ENST00000632421 NESP48681 1621 aa18.71■□□□□ 0.59
PHACTR4-206ENST00000632421 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
PHACTR4-206ENST00000632421 APLP2Q06481 763 aa18.7■□□□□ 0.58
PHACTR4-206ENST00000632421 IGF1RP08069 1367 aa18.69■□□□□ 0.58
PHACTR4-206ENST00000632421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
PHACTR4-206ENST00000632421 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
PHACTR4-206ENST00000632421 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
PHACTR4-206ENST00000632421 CCER1Q8TC90 406 aaPredicted RBP18.66■□□□□ 0.58
PHACTR4-206ENST00000632421 TOPBP1Q92547 1522 aa18.65■□□□□ 0.58
PHACTR4-206ENST00000632421 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
PHACTR4-206ENST00000632421 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
PHACTR4-206ENST00000632421 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
PHACTR4-206ENST00000632421 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
PHACTR4-206ENST00000632421 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
PHACTR4-206ENST00000632421 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
PHACTR4-206ENST00000632421 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
PHACTR4-206ENST00000632421 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
PHACTR4-206ENST00000632421 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
PHACTR4-206ENST00000632421 CUL7Q14999 1698 aa18.48■□□□□ 0.55
PHACTR4-206ENST00000632421 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
PHACTR4-206ENST00000632421 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
PHACTR4-206ENST00000632421 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
PHACTR4-206ENST00000632421 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
PHACTR4-206ENST00000632421 CTTNBP2Q8WZ74 1663 aa18.36■□□□□ 0.53
PHACTR4-206ENST00000632421 MAP3K1Q13233 1512 aa18.36■□□□□ 0.53
PHACTR4-206ENST00000632421 TDRD9Q8NDG6 1382 aaKnown RBP18.36■□□□□ 0.53
PHACTR4-206ENST00000632421 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
PHACTR4-206ENST00000632421 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
PHACTR4-206ENST00000632421 RRBP1Q9P2E9 1410 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms