RNA–Protein interactions for RNA: ENST00000373917.7

GMPPA-205, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 5 BASIC

Gene GMPPA, Length 1,630 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-205ENST00000373917 NISCHQ9Y2I1 1504 aa48.45■■■■■ 5.35
GMPPA-205ENST00000373917 CCDC180Q9P1Z9 1646 aa43.03■■■■■ 4.48
GMPPA-205ENST00000373917 ABCC9O60706 1549 aa41.86■■■■■ 4.29
GMPPA-205ENST00000373917 ZCCHC6Q5VYS8 1495 aaKnown RBP40.43■■■■■ 4.06
GMPPA-205ENST00000373917 RB1CC1Q8TDY2 1594 aa40.39■■■■■ 4.06
GMPPA-205ENST00000373917 NACADO15069 1562 aa40.38■■■■■ 4.06
GMPPA-205ENST00000373917 DCAF8L2P0C7V8 631 aa40.35■■■■■ 4.05
GMPPA-205ENST00000373917 MYO15BQ96JP2 1530 aa40.22■■■■■ 4.03
GMPPA-205ENST00000373917 DCAF1Q9Y4B6 1507 aa40.12■■■■■ 4.01
GMPPA-205ENST00000373917 UNC13AQ9UPW8 1703 aa39.44■■■■□ 3.9
GMPPA-205ENST00000373917 SCRIBQ14160 1630 aa39.26■■■■□ 3.88
GMPPA-205ENST00000373917 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
GMPPA-205ENST00000373917 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.851e-5■□□□□ 8.6
GMPPA-205ENST00000373917 SHROOM4Q9ULL8 1493 aa38.8■■■■□ 3.8
GMPPA-205ENST00000373917 DNAJC5BQ9UF47 199 aa38.7■■■■□ 3.79
GMPPA-205ENST00000373917 EIF4G1Q04637 1599 aaKnown RBP38.1■■■■□ 3.69
GMPPA-205ENST00000373917 CC2D2AQ9P2K1 1620 aa37.88■■■■□ 3.65
GMPPA-205ENST00000373917 CECR2Q9BXF3 1484 aa37.7■■■■□ 3.63
GMPPA-205ENST00000373917 SMARCA4P51532 1647 aa37.57■■■■□ 3.61
GMPPA-205ENST00000373917 BAZ1AQ9NRL2 1556 aaPredicted RBP37.57■■■■□ 3.6
GMPPA-205ENST00000373917 MROH2BQ7Z745 1585 aa37.34■■■■□ 3.57
GMPPA-205ENST00000373917 SMARCA2P51531 1590 aa37.3■■■■□ 3.56
GMPPA-205ENST00000373917 ATAD2BQ9ULI0 1458 aa37.29■■■■□ 3.56
GMPPA-205ENST00000373917 NCAPD3P42695 1498 aa37.23■■■■□ 3.55
GMPPA-205ENST00000373917 PEG3Q9GZU2 1588 aa37.2■■■■□ 3.55
GMPPA-205ENST00000373917 HMGXB3Q12766 1538 aa37.12■■■■□ 3.53
GMPPA-205ENST00000373917 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
GMPPA-205ENST00000373917 RSF1Q96T23 1441 aaPredicted RBP36.98■■■■□ 3.51
GMPPA-205ENST00000373917 WIZO95785 1651 aa36.94■■■■□ 3.5
GMPPA-205ENST00000373917 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
GMPPA-205ENST00000373917 SUPT5HO00267 1087 aaKnown RBP36.3■■■■□ 3.4
GMPPA-205ENST00000373917 NESP48681 1621 aa36.27■■■■□ 3.4
GMPPA-205ENST00000373917 LAMC3Q9Y6N6 1575 aa36.26■■■■□ 3.39
GMPPA-205ENST00000373917 CADPSQ9ULU8 1353 aa36.16■■■■□ 3.38
GMPPA-205ENST00000373917 CCDC88BA6NC98 1476 aa36.12■■■■□ 3.37
GMPPA-205ENST00000373917 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
GMPPA-205ENST00000373917 CFTRP13569 1480 aa36■■■■□ 3.35
GMPPA-205ENST00000373917 PDS5BQ9NTI5 1447 aa35.99■■■■□ 3.35
GMPPA-205ENST00000373917 KIF21AQ7Z4S6 1674 aa35.87■■■■□ 3.33
GMPPA-205ENST00000373917 CUX2O14529 1486 aa35.78■■■■□ 3.32
GMPPA-205ENST00000373917 PRDM2Q13029 1718 aa35.78■■■■□ 3.32
GMPPA-205ENST00000373917 FANCD2Q9BXW9 1451 aa35.77■■■■□ 3.32
GMPPA-205ENST00000373917 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
GMPPA-205ENST00000373917 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
GMPPA-205ENST00000373917 MRC2Q9UBG0 1479 aa35.63■■■■□ 3.29
GMPPA-205ENST00000373917 WDR62O43379 1518 aa35.5■■■■□ 3.27
GMPPA-205ENST00000373917 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
GMPPA-205ENST00000373917 DNAJC5Q9H3Z4 198 aa35.32■■■■□ 3.24
GMPPA-205ENST00000373917 ABCC8Q09428 1581 aa35.24■■■■□ 3.23
GMPPA-205ENST00000373917 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
GMPPA-205ENST00000373917 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
GMPPA-205ENST00000373917 CUX1P39880 1505 aa35.02■■■■□ 3.2
GMPPA-205ENST00000373917 CHIC1Q5VXU3 224 aa35.01■■■■□ 3.19
GMPPA-205ENST00000373917 IFT140Q96RY7 1462 aa34.96■■■■□ 3.19
GMPPA-205ENST00000373917 POLA1P09884 1462 aaPredicted RBP34.94■■■■□ 3.18
GMPPA-205ENST00000373917 WRNQ14191 1432 aaPredicted RBP eCLIP34.9■■■■□ 3.18
GMPPA-205ENST00000373917 FGD5Q6ZNL6 1462 aa34.89■■■■□ 3.18
GMPPA-205ENST00000373917 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
GMPPA-205ENST00000373917 TOP2BQ02880 1626 aa34.79■■■■□ 3.16
GMPPA-205ENST00000373917 BIVM-ERCC5R4GMW8 1640 aa34.79■■■■□ 3.16
GMPPA-205ENST00000373917 SYNJ1O43426 1573 aa34.79■■■■□ 3.16
GMPPA-205ENST00000373917 SOGA1O94964 1423 aa34.77■■■■□ 3.16
GMPPA-205ENST00000373917 RAD54L2Q9Y4B4 1467 aa34.75■■■■□ 3.15
GMPPA-205ENST00000373917 ZNF608Q9ULD9 1512 aaPredicted RBP34.75■■■■□ 3.15
GMPPA-205ENST00000373917 EIF4G3O43432 1585 aaKnown RBP34.67■■■■□ 3.14
GMPPA-205ENST00000373917 WDR97A6NE52 1622 aa34.6■■■■□ 3.13
GMPPA-205ENST00000373917 AQRO60306 1485 aaKnown RBP eCLIP34.58■■■■□ 3.136e-7■■■■■ 42.5
GMPPA-205ENST00000373917 ABCA10Q8WWZ4 1543 aa34.56■■■■□ 3.12
GMPPA-205ENST00000373917 TDRD9Q8NDG6 1382 aaKnown RBP34.54■■■■□ 3.12
GMPPA-205ENST00000373917 ABCA5Q8WWZ7 1642 aa34.41■■■■□ 3.1
GMPPA-205ENST00000373917 GAPVD1Q14C86 1478 aa34.4■■■■□ 3.1
GMPPA-205ENST00000373917 GRIN2BQ13224 1484 aa34.37■■■■□ 3.09
GMPPA-205ENST00000373917 PBRM1Q86U86 1689 aa34.33■■■■□ 3.09
GMPPA-205ENST00000373917 SNAPC4Q5SXM2 1469 aa34.3■■■■□ 3.08
GMPPA-205ENST00000373917 MAGI1Q96QZ7 1491 aaPredicted RBP34.28■■■■□ 3.08
GMPPA-205ENST00000373917 TRIM41Q8WV44 630 aa34.18■■■■□ 3.06
GMPPA-205ENST00000373917 CHD1O14646 1710 aa34.18■■■■□ 3.06
GMPPA-205ENST00000373917 ERICH3Q5RHP9 1530 aa34.16■■■■□ 3.06
GMPPA-205ENST00000373917 KIF27Q86VH2 1401 aa34.15■■■■□ 3.06
GMPPA-205ENST00000373917 OSCARQ8IYS5 282 aa34.15■■■■□ 3.06
GMPPA-205ENST00000373917 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
GMPPA-205ENST00000373917 FBLN2P98095 1184 aa34.12■■■■□ 3.05
GMPPA-205ENST00000373917 ADAMTS12P58397 1594 aa34.08■■■■□ 3.05
GMPPA-205ENST00000373917 CHMP7Q8WUX9 453 aaPredicted RBP34.07■■■■□ 3.04
GMPPA-205ENST00000373917 FHAD1B1AJZ9 1412 aa34.01■■■■□ 3.04
GMPPA-205ENST00000373917 GRIN2AQ12879 1464 aa33.94■■■■□ 3.02
GMPPA-205ENST00000373917 IGF1RP08069 1367 aa33.93■■■■□ 3.02
GMPPA-205ENST00000373917 CUL7Q14999 1698 aa33.91■■■■□ 3.02
GMPPA-205ENST00000373917 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
GMPPA-205ENST00000373917 CLASP1Q7Z460 1538 aa33.81■■■■□ 3
GMPPA-205ENST00000373917 RIMBP3CA6NJZ7 1639 aa33.78■■■■□ 3
GMPPA-205ENST00000373917 RIMBP3BA6NNM3 1639 aa33.78■■■■□ 3
GMPPA-205ENST00000373917 RIMBP3Q9UFD9 1639 aa33.78■■■■□ 3
GMPPA-205ENST00000373917 NUP160Q12769 1436 aa33.77■■■■□ 3
GMPPA-205ENST00000373917 CARMIL1Q5VZK9 1371 aa33.76■■■□□ 2.99
GMPPA-205ENST00000373917 CEP170Q5SW79 1584 aa33.75■■■□□ 2.99
GMPPA-205ENST00000373917 EEA1Q15075 1411 aa33.66■■■□□ 2.98
GMPPA-205ENST00000373917 ARHGEF11O15085 1522 aa33.65■■■□□ 2.98
GMPPA-205ENST00000373917 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
GMPPA-205ENST00000373917 RAPGEF2Q9Y4G8 1499 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms