RNA–Protein interactions for RNA: ENST00000632202.1

PHACTR4-205, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-205ENST00000632202 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
PHACTR4-205ENST00000632202 ABCC9O60706 1549 aa34.09■■■■□ 3.05
PHACTR4-205ENST00000632202 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
PHACTR4-205ENST00000632202 RB1CC1Q8TDY2 1594 aa32.38■■■□□ 2.77
PHACTR4-205ENST00000632202 NACADO15069 1562 aa32.15■■■□□ 2.74
PHACTR4-205ENST00000632202 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
PHACTR4-205ENST00000632202 UNC13AQ9UPW8 1703 aa31.83■■■□□ 2.69
PHACTR4-205ENST00000632202 DCAF8L2P0C7V8 631 aa31.8■■■□□ 2.68
PHACTR4-205ENST00000632202 MYO15BQ96JP2 1530 aa31.71■■■□□ 2.67
PHACTR4-205ENST00000632202 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
PHACTR4-205ENST00000632202 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
PHACTR4-205ENST00000632202 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
PHACTR4-205ENST00000632202 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
PHACTR4-205ENST00000632202 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.56
PHACTR4-205ENST00000632202 SCRIBQ14160 1630 aa31■■■□□ 2.55
PHACTR4-205ENST00000632202 CC2D2AQ9P2K1 1620 aa30.84■■■□□ 2.53
PHACTR4-205ENST00000632202 EIF4G1Q04637 1599 aaKnown RBP30.75■■■□□ 2.51
PHACTR4-205ENST00000632202 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
PHACTR4-205ENST00000632202 NCAPD3P42695 1498 aa29.7■■■□□ 2.35
PHACTR4-205ENST00000632202 ATAD2BQ9ULI0 1458 aa29.62■■■□□ 2.33
PHACTR4-205ENST00000632202 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
PHACTR4-205ENST00000632202 HMGXB3Q12766 1538 aa29.5■■■□□ 2.31
PHACTR4-205ENST00000632202 DNAJC5Q9H3Z4 198 aa29.48■■■□□ 2.31
PHACTR4-205ENST00000632202 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
PHACTR4-205ENST00000632202 CUX2O14529 1486 aa29.4■■■□□ 2.3
PHACTR4-205ENST00000632202 BAZ1AQ9NRL2 1556 aaPredicted RBP29.36■■■□□ 2.29
PHACTR4-205ENST00000632202 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
PHACTR4-205ENST00000632202 NESP48681 1621 aa29.32■■■□□ 2.28
PHACTR4-205ENST00000632202 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
PHACTR4-205ENST00000632202 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
PHACTR4-205ENST00000632202 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
PHACTR4-205ENST00000632202 THOC2Q8NI27 1593 aaKnown RBP29.08■■■□□ 2.25
PHACTR4-205ENST00000632202 LAMC3Q9Y6N6 1575 aa29.04■■■□□ 2.24
PHACTR4-205ENST00000632202 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
PHACTR4-205ENST00000632202 WIZO95785 1651 aa28.87■■■□□ 2.21
PHACTR4-205ENST00000632202 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
PHACTR4-205ENST00000632202 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.2
PHACTR4-205ENST00000632202 MRC2Q9UBG0 1479 aa28.62■■■□□ 2.17
PHACTR4-205ENST00000632202 WDR62O43379 1518 aa28.61■■■□□ 2.17
PHACTR4-205ENST00000632202 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
PHACTR4-205ENST00000632202 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
PHACTR4-205ENST00000632202 CFTRP13569 1480 aa28.46■■■□□ 2.15
PHACTR4-205ENST00000632202 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.15
PHACTR4-205ENST00000632202 FANCD2Q9BXW9 1451 aa28.45■■■□□ 2.14
PHACTR4-205ENST00000632202 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
PHACTR4-205ENST00000632202 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
PHACTR4-205ENST00000632202 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
PHACTR4-205ENST00000632202 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
PHACTR4-205ENST00000632202 ZNF608Q9ULD9 1512 aaPredicted RBP27.96■■■□□ 2.07
PHACTR4-205ENST00000632202 OSCARQ8IYS5 282 aa27.95■■■□□ 2.06
PHACTR4-205ENST00000632202 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
PHACTR4-205ENST00000632202 IFT140Q96RY7 1462 aa27.89■■■□□ 2.06
PHACTR4-205ENST00000632202 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
PHACTR4-205ENST00000632202 EIF4G3O43432 1585 aaKnown RBP27.78■■■□□ 2.04
PHACTR4-205ENST00000632202 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
PHACTR4-205ENST00000632202 RIMBP3CA6NJZ7 1639 aa27.75■■■□□ 2.03
PHACTR4-205ENST00000632202 RIMBP3BA6NNM3 1639 aa27.75■■■□□ 2.03
PHACTR4-205ENST00000632202 RIMBP3Q9UFD9 1639 aa27.75■■■□□ 2.03
PHACTR4-205ENST00000632202 TARBP1Q13395 1621 aaKnown RBP27.74■■■□□ 2.03
PHACTR4-205ENST00000632202 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
PHACTR4-205ENST00000632202 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.013e-6■■■■□ 24.1
PHACTR4-205ENST00000632202 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
PHACTR4-205ENST00000632202 CHD1O14646 1710 aa27.62■■■□□ 2.01
PHACTR4-205ENST00000632202 RAD54L2Q9Y4B4 1467 aa27.55■■■□□ 2
PHACTR4-205ENST00000632202 CUX1P39880 1505 aa27.46■■□□□ 1.99
PHACTR4-205ENST00000632202 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
PHACTR4-205ENST00000632202 SOGA1O94964 1423 aa27.44■■□□□ 1.98
PHACTR4-205ENST00000632202 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
PHACTR4-205ENST00000632202 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
PHACTR4-205ENST00000632202 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
PHACTR4-205ENST00000632202 SNAPC4Q5SXM2 1469 aa27.36■■□□□ 1.97
PHACTR4-205ENST00000632202 FBLN2P98095 1184 aa27.32■■□□□ 1.96
PHACTR4-205ENST00000632202 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
PHACTR4-205ENST00000632202 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
PHACTR4-205ENST00000632202 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
PHACTR4-205ENST00000632202 GRIN2BQ13224 1484 aa27.23■■□□□ 1.95
PHACTR4-205ENST00000632202 PBRM1Q86U86 1689 aa27.21■■□□□ 1.95
PHACTR4-205ENST00000632202 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
PHACTR4-205ENST00000632202 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
PHACTR4-205ENST00000632202 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
PHACTR4-205ENST00000632202 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
PHACTR4-205ENST00000632202 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
PHACTR4-205ENST00000632202 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
PHACTR4-205ENST00000632202 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
PHACTR4-205ENST00000632202 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
PHACTR4-205ENST00000632202 TRHP20396 242 aaPredicted RBP26.97■■□□□ 1.91
PHACTR4-205ENST00000632202 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
PHACTR4-205ENST00000632202 ADAMTS12P58397 1594 aa26.94■■□□□ 1.9
PHACTR4-205ENST00000632202 WRNQ14191 1432 aaPredicted RBP eCLIP26.91■■□□□ 1.9
PHACTR4-205ENST00000632202 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
PHACTR4-205ENST00000632202 ERCC6L2Q5T890 1561 aa26.91■■□□□ 1.9
PHACTR4-205ENST00000632202 CEP170Q5SW79 1584 aa26.88■■□□□ 1.89
PHACTR4-205ENST00000632202 NUP160Q12769 1436 aa26.86■■□□□ 1.89
PHACTR4-205ENST00000632202 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
PHACTR4-205ENST00000632202 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
PHACTR4-205ENST00000632202 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
PHACTR4-205ENST00000632202 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
PHACTR4-205ENST00000632202 PRG4Q92954 1404 aaPredicted RBP26.54■■□□□ 1.84
PHACTR4-205ENST00000632202 KIF13AQ9H1H9 1805 aa26.51■■□□□ 1.83
PHACTR4-205ENST00000632202 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms