RNA–Protein interactions for RNA: ENST00000313597.9

GMPPA-201, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GMPPA, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-201ENST00000313597 NISCHQ9Y2I1 1504 aa51.61■■■■■ 5.85
GMPPA-201ENST00000313597 CCDC180Q9P1Z9 1646 aa45.85■■■■■ 4.93
GMPPA-201ENST00000313597 ABCC9O60706 1549 aa45.15■■■■■ 4.82
GMPPA-201ENST00000313597 RB1CC1Q8TDY2 1594 aa43.32■■■■■ 4.52
GMPPA-201ENST00000313597 DCAF8L2P0C7V8 631 aa43.31■■■■■ 4.52
GMPPA-201ENST00000313597 NACADO15069 1562 aa43.26■■■■■ 4.51
GMPPA-201ENST00000313597 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
GMPPA-201ENST00000313597 ZCCHC6Q5VYS8 1495 aaKnown RBP42.91■■■■■ 4.46
GMPPA-201ENST00000313597 DCAF1Q9Y4B6 1507 aa42.7■■■■■ 4.43
GMPPA-201ENST00000313597 PABPN1Q86U42 306 aaKnown RBP eCLIP42.25■■■■■ 4.351e-5■□□□□ 8.6
GMPPA-201ENST00000313597 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
GMPPA-201ENST00000313597 BICRAQ9NZM4 1560 aa42.01■■■■■ 4.32
GMPPA-201ENST00000313597 SCRIBQ14160 1630 aa41.84■■■■■ 4.29
GMPPA-201ENST00000313597 DNAJC5BQ9UF47 199 aa41.74■■■■■ 4.27
GMPPA-201ENST00000313597 SHROOM4Q9ULL8 1493 aa41.58■■■■■ 4.25
GMPPA-201ENST00000313597 EIF4G1Q04637 1599 aaKnown RBP40.91■■■■■ 4.14
GMPPA-201ENST00000313597 CC2D2AQ9P2K1 1620 aa40.79■■■■■ 4.12
GMPPA-201ENST00000313597 CECR2Q9BXF3 1484 aa40.61■■■■■ 4.09
GMPPA-201ENST00000313597 SMARCA4P51532 1647 aa40.02■■■■■ 4
GMPPA-201ENST00000313597 BAZ1AQ9NRL2 1556 aaPredicted RBP39.99■■■■□ 3.99
GMPPA-201ENST00000313597 NCAPD3P42695 1498 aa39.98■■■■□ 3.99
GMPPA-201ENST00000313597 ATAD2BQ9ULI0 1458 aa39.94■■■■□ 3.98
GMPPA-201ENST00000313597 SMARCA2P51531 1590 aa39.84■■■■□ 3.97
GMPPA-201ENST00000313597 MROH2BQ7Z745 1585 aa39.76■■■■□ 3.96
GMPPA-201ENST00000313597 HMGXB3Q12766 1538 aa39.67■■■■□ 3.94
GMPPA-201ENST00000313597 PEG3Q9GZU2 1588 aa39.67■■■■□ 3.94
GMPPA-201ENST00000313597 BAZ1BQ9UIG0 1483 aaKnown RBP39.57■■■■□ 3.92
GMPPA-201ENST00000313597 RSF1Q96T23 1441 aaPredicted RBP39.3■■■■□ 3.88
GMPPA-201ENST00000313597 WIZO95785 1651 aa39.27■■■■□ 3.88
GMPPA-201ENST00000313597 NESP48681 1621 aa39.01■■■■□ 3.84
GMPPA-201ENST00000313597 ERCC6Q03468 1493 aa38.93■■■■□ 3.82
GMPPA-201ENST00000313597 LAMC3Q9Y6N6 1575 aa38.86■■■■□ 3.81
GMPPA-201ENST00000313597 TOP2AP11388 1531 aaKnown RBP38.86■■■■□ 3.81
GMPPA-201ENST00000313597 CADPSQ9ULU8 1353 aa38.83■■■■□ 3.81
GMPPA-201ENST00000313597 PDS5BQ9NTI5 1447 aa38.7■■■■□ 3.79
GMPPA-201ENST00000313597 CUX2O14529 1486 aa38.59■■■■□ 3.77
GMPPA-201ENST00000313597 CFTRP13569 1480 aa38.51■■■■□ 3.76
GMPPA-201ENST00000313597 CCDC88BA6NC98 1476 aa38.48■■■■□ 3.75
GMPPA-201ENST00000313597 KIF21AQ7Z4S6 1674 aa38.42■■■■□ 3.74
GMPPA-201ENST00000313597 THOC2Q8NI27 1593 aaKnown RBP38.38■■■■□ 3.73
GMPPA-201ENST00000313597 FANCD2Q9BXW9 1451 aa38.31■■■■□ 3.72
GMPPA-201ENST00000313597 CEP164Q9UPV0 1460 aa38.25■■■■□ 3.71
GMPPA-201ENST00000313597 MRC2Q9UBG0 1479 aa38.25■■■■□ 3.71
GMPPA-201ENST00000313597 SUPT5HO00267 1087 aaKnown RBP38.21■■■■□ 3.71
GMPPA-201ENST00000313597 WDR62O43379 1518 aa38.1■■■■□ 3.69
GMPPA-201ENST00000313597 PRDM2Q13029 1718 aa37.99■■■■□ 3.67
GMPPA-201ENST00000313597 URB2Q14146 1524 aaKnown RBP37.93■■■■□ 3.66
GMPPA-201ENST00000313597 DNAJC5Q9H3Z4 198 aa37.76■■■■□ 3.63
GMPPA-201ENST00000313597 ABCC8Q09428 1581 aa37.69■■■■□ 3.62
GMPPA-201ENST00000313597 TOPBP1Q92547 1522 aa37.67■■■■□ 3.62
GMPPA-201ENST00000313597 DNMBPQ6XZF7 1577 aa37.57■■■■□ 3.6
GMPPA-201ENST00000313597 IFT140Q96RY7 1462 aa37.49■■■■□ 3.59
GMPPA-201ENST00000313597 POLA1P09884 1462 aaPredicted RBP37.33■■■■□ 3.57
GMPPA-201ENST00000313597 ZNF608Q9ULD9 1512 aaPredicted RBP37.33■■■■□ 3.57
GMPPA-201ENST00000313597 CUX1P39880 1505 aa37.31■■■■□ 3.56
GMPPA-201ENST00000313597 SOGA1O94964 1423 aa37.25■■■■□ 3.55
GMPPA-201ENST00000313597 TARBP1Q13395 1621 aaKnown RBP37.23■■■■□ 3.55
GMPPA-201ENST00000313597 FGD5Q6ZNL6 1462 aa37.2■■■■□ 3.55
GMPPA-201ENST00000313597 RAD54L2Q9Y4B4 1467 aa37.2■■■■□ 3.55
GMPPA-201ENST00000313597 AQRO60306 1485 aaKnown RBP eCLIP37.14■■■■□ 3.546e-7■■■■■ 42.5
GMPPA-201ENST00000313597 OSCARQ8IYS5 282 aa37.09■■■■□ 3.53
GMPPA-201ENST00000313597 EIF4G3O43432 1585 aaKnown RBP37.08■■■■□ 3.53
GMPPA-201ENST00000313597 TDRD9Q8NDG6 1382 aaKnown RBP37.07■■■■□ 3.52
GMPPA-201ENST00000313597 WRNQ14191 1432 aaPredicted RBP eCLIP37.04■■■■□ 3.52
GMPPA-201ENST00000313597 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
GMPPA-201ENST00000313597 TOP2BQ02880 1626 aa36.91■■■■□ 3.5
GMPPA-201ENST00000313597 SYNJ1O43426 1573 aa36.87■■■■□ 3.49
GMPPA-201ENST00000313597 ABCA10Q8WWZ4 1543 aa36.87■■■■□ 3.49
GMPPA-201ENST00000313597 BIVM-ERCC5R4GMW8 1640 aa36.86■■■■□ 3.49
GMPPA-201ENST00000313597 GRIN2BQ13224 1484 aa36.79■■■■□ 3.48
GMPPA-201ENST00000313597 GAPVD1Q14C86 1478 aa36.77■■■■□ 3.48
GMPPA-201ENST00000313597 FBLN2P98095 1184 aa36.77■■■■□ 3.48
GMPPA-201ENST00000313597 SNAPC4Q5SXM2 1469 aa36.73■■■■□ 3.47
GMPPA-201ENST00000313597 MAGI1Q96QZ7 1491 aaPredicted RBP36.7■■■■□ 3.47
GMPPA-201ENST00000313597 CHMP7Q8WUX9 453 aaPredicted RBP36.65■■■■□ 3.46
GMPPA-201ENST00000313597 ABCA5Q8WWZ7 1642 aa36.65■■■■□ 3.46
GMPPA-201ENST00000313597 CHD1O14646 1710 aa36.61■■■■□ 3.45
GMPPA-201ENST00000313597 SYNJ2O15056 1496 aa36.57■■■■□ 3.44
GMPPA-201ENST00000313597 PBRM1Q86U86 1689 aa36.54■■■■□ 3.44
GMPPA-201ENST00000313597 ERICH3Q5RHP9 1530 aa36.4■■■■□ 3.42
GMPPA-201ENST00000313597 TRIM41Q8WV44 630 aa36.37■■■■□ 3.41
GMPPA-201ENST00000313597 FHAD1B1AJZ9 1412 aa36.36■■■■□ 3.41
GMPPA-201ENST00000313597 ARHGEF11O15085 1522 aa36.34■■■■□ 3.41
GMPPA-201ENST00000313597 RIMBP3CA6NJZ7 1639 aa36.32■■■■□ 3.41
GMPPA-201ENST00000313597 RIMBP3BA6NNM3 1639 aa36.32■■■■□ 3.41
GMPPA-201ENST00000313597 RIMBP3Q9UFD9 1639 aa36.32■■■■□ 3.41
GMPPA-201ENST00000313597 ADAMTS12P58397 1594 aa36.31■■■■□ 3.4
GMPPA-201ENST00000313597 CLASP1Q7Z460 1538 aa36.3■■■■□ 3.4
GMPPA-201ENST00000313597 KIF27Q86VH2 1401 aa36.3■■■■□ 3.4
GMPPA-201ENST00000313597 GRIN2AQ12879 1464 aa36.29■■■■□ 3.4
GMPPA-201ENST00000313597 IGF1RP08069 1367 aa36.24■■■■□ 3.39
GMPPA-201ENST00000313597 NUP160Q12769 1436 aa36.17■■■■□ 3.38
GMPPA-201ENST00000313597 CYB5RLQ6IPT4 315 aa36.14■■■■□ 3.38
GMPPA-201ENST00000313597 CEP170Q5SW79 1584 aa36.07■■■■□ 3.37
GMPPA-201ENST00000313597 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
GMPPA-201ENST00000313597 CARMIL1Q5VZK9 1371 aa35.99■■■■□ 3.35
GMPPA-201ENST00000313597 CUL7Q14999 1698 aa35.96■■■■□ 3.35
GMPPA-201ENST00000313597 JPH4Q96JJ6 628 aa35.9■■■■□ 3.34
GMPPA-201ENST00000313597 RUSC2Q8N2Y8 1516 aa35.89■■■■□ 3.34
GMPPA-201ENST00000313597 SHROOM2Q13796 1616 aa35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms