RNA–Protein interactions for RNA: ENST00000635609.1

GMPPA-214, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 5

Gene GMPPA, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-214ENST00000635609 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
GMPPA-214ENST00000635609 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
GMPPA-214ENST00000635609 ABCC9O60706 1549 aa22.46■■□□□ 1.19
GMPPA-214ENST00000635609 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
GMPPA-214ENST00000635609 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
GMPPA-214ENST00000635609 NACADO15069 1562 aa21.66■■□□□ 1.06
GMPPA-214ENST00000635609 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
GMPPA-214ENST00000635609 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
GMPPA-214ENST00000635609 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
GMPPA-214ENST00000635609 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
GMPPA-214ENST00000635609 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
GMPPA-214ENST00000635609 BICRAQ9NZM4 1560 aa21.09■□□□□ 0.97
GMPPA-214ENST00000635609 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
GMPPA-214ENST00000635609 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
GMPPA-214ENST00000635609 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
GMPPA-214ENST00000635609 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
GMPPA-214ENST00000635609 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
GMPPA-214ENST00000635609 CECR2Q9BXF3 1484 aa20.32■□□□□ 0.84
GMPPA-214ENST00000635609 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
GMPPA-214ENST00000635609 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
GMPPA-214ENST00000635609 MROH2BQ7Z745 1585 aa20.16■□□□□ 0.82
GMPPA-214ENST00000635609 WIZO95785 1651 aa20.03■□□□□ 0.8
GMPPA-214ENST00000635609 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
GMPPA-214ENST00000635609 PEG3Q9GZU2 1588 aa20.02■□□□□ 0.8
GMPPA-214ENST00000635609 ATAD2BQ9ULI0 1458 aa20.01■□□□□ 0.79
GMPPA-214ENST00000635609 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
GMPPA-214ENST00000635609 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
GMPPA-214ENST00000635609 NCAPD3P42695 1498 aa19.91■□□□□ 0.78
GMPPA-214ENST00000635609 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
GMPPA-214ENST00000635609 TOP2AP11388 1531 aaKnown RBP19.76■□□□□ 0.75
GMPPA-214ENST00000635609 NESP48681 1621 aa19.52■□□□□ 0.72
GMPPA-214ENST00000635609 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
GMPPA-214ENST00000635609 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
GMPPA-214ENST00000635609 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
GMPPA-214ENST00000635609 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
GMPPA-214ENST00000635609 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
GMPPA-214ENST00000635609 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
GMPPA-214ENST00000635609 CFTRP13569 1480 aa19.3■□□□□ 0.68
GMPPA-214ENST00000635609 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
GMPPA-214ENST00000635609 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.67
GMPPA-214ENST00000635609 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
GMPPA-214ENST00000635609 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
GMPPA-214ENST00000635609 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
GMPPA-214ENST00000635609 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
GMPPA-214ENST00000635609 WDR62O43379 1518 aa19.07■□□□□ 0.64
GMPPA-214ENST00000635609 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
GMPPA-214ENST00000635609 CUX2O14529 1486 aa19■□□□□ 0.63
GMPPA-214ENST00000635609 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
GMPPA-214ENST00000635609 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
GMPPA-214ENST00000635609 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
GMPPA-214ENST00000635609 CUX1P39880 1505 aa18.91■□□□□ 0.62
GMPPA-214ENST00000635609 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
GMPPA-214ENST00000635609 SYNJ1O43426 1573 aa18.86■□□□□ 0.61
GMPPA-214ENST00000635609 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
GMPPA-214ENST00000635609 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
GMPPA-214ENST00000635609 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
GMPPA-214ENST00000635609 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
GMPPA-214ENST00000635609 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
GMPPA-214ENST00000635609 POLA1P09884 1462 aaPredicted RBP18.78■□□□□ 0.6
GMPPA-214ENST00000635609 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
GMPPA-214ENST00000635609 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
GMPPA-214ENST00000635609 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
GMPPA-214ENST00000635609 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
GMPPA-214ENST00000635609 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
GMPPA-214ENST00000635609 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
GMPPA-214ENST00000635609 SOGA1O94964 1423 aa18.62■□□□□ 0.57
GMPPA-214ENST00000635609 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
GMPPA-214ENST00000635609 ABCA10Q8WWZ4 1543 aa18.57■□□□□ 0.56
GMPPA-214ENST00000635609 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.563e-7■■■■■ 29.1
GMPPA-214ENST00000635609 CHD1O14646 1710 aa18.52■□□□□ 0.56
GMPPA-214ENST00000635609 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
GMPPA-214ENST00000635609 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.54
GMPPA-214ENST00000635609 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
GMPPA-214ENST00000635609 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
GMPPA-214ENST00000635609 GRIN2BQ13224 1484 aa18.41■□□□□ 0.54
GMPPA-214ENST00000635609 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
GMPPA-214ENST00000635609 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
GMPPA-214ENST00000635609 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
GMPPA-214ENST00000635609 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.53
GMPPA-214ENST00000635609 CUL7Q14999 1698 aa18.32■□□□□ 0.52
GMPPA-214ENST00000635609 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
GMPPA-214ENST00000635609 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
GMPPA-214ENST00000635609 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
GMPPA-214ENST00000635609 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
GMPPA-214ENST00000635609 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
GMPPA-214ENST00000635609 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
GMPPA-214ENST00000635609 FBLN2P98095 1184 aa18.2■□□□□ 0.5
GMPPA-214ENST00000635609 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
GMPPA-214ENST00000635609 IGF1RP08069 1367 aa18.18■□□□□ 0.5
GMPPA-214ENST00000635609 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
GMPPA-214ENST00000635609 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
GMPPA-214ENST00000635609 NUP160Q12769 1436 aa18.11■□□□□ 0.49
GMPPA-214ENST00000635609 CARMIL1Q5VZK9 1371 aa18.1■□□□□ 0.49
GMPPA-214ENST00000635609 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
GMPPA-214ENST00000635609 RIMBP3CA6NJZ7 1639 aa18.08■□□□□ 0.48
GMPPA-214ENST00000635609 RIMBP3BA6NNM3 1639 aa18.08■□□□□ 0.48
GMPPA-214ENST00000635609 RIMBP3Q9UFD9 1639 aa18.08■□□□□ 0.48
GMPPA-214ENST00000635609 EEA1Q15075 1411 aa18.06■□□□□ 0.48
GMPPA-214ENST00000635609 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
GMPPA-214ENST00000635609 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms