RNA–Protein interactions for RNA: ENST00000371514.7

SCP2-203, Transcript of sterol carrier protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCP2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-203ENST00000371514 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
SCP2-203ENST00000371514 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
SCP2-203ENST00000371514 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
SCP2-203ENST00000371514 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
SCP2-203ENST00000371514 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
SCP2-203ENST00000371514 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
SCP2-203ENST00000371514 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.14
SCP2-203ENST00000371514 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
SCP2-203ENST00000371514 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
SCP2-203ENST00000371514 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
SCP2-203ENST00000371514 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
SCP2-203ENST00000371514 HRCP23327 699 aa21.59■■□□□ 1.05
SCP2-203ENST00000371514 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
SCP2-203ENST00000371514 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
SCP2-203ENST00000371514 SCRIBQ14160 1630 aa21.3■■□□□ 1
SCP2-203ENST00000371514 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
SCP2-203ENST00000371514 ABCC9O60706 1549 aa21.17■□□□□ 0.98
SCP2-203ENST00000371514 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
SCP2-203ENST00000371514 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
SCP2-203ENST00000371514 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
SCP2-203ENST00000371514 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
SCP2-203ENST00000371514 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
SCP2-203ENST00000371514 NACADO15069 1562 aa20.83■□□□□ 0.92
SCP2-203ENST00000371514 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
SCP2-203ENST00000371514 WIZO95785 1651 aa20.71■□□□□ 0.91
SCP2-203ENST00000371514 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
SCP2-203ENST00000371514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
SCP2-203ENST00000371514 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
SCP2-203ENST00000371514 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
SCP2-203ENST00000371514 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
SCP2-203ENST00000371514 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
SCP2-203ENST00000371514 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
SCP2-203ENST00000371514 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.83
SCP2-203ENST00000371514 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
SCP2-203ENST00000371514 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
SCP2-203ENST00000371514 SOGA1O94964 1423 aa20.22■□□□□ 0.83
SCP2-203ENST00000371514 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
SCP2-203ENST00000371514 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
SCP2-203ENST00000371514 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
SCP2-203ENST00000371514 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
SCP2-203ENST00000371514 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
SCP2-203ENST00000371514 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
SCP2-203ENST00000371514 CEP162Q5TB80 1403 aa20.07■□□□□ 0.8
SCP2-203ENST00000371514 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
SCP2-203ENST00000371514 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
SCP2-203ENST00000371514 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
SCP2-203ENST00000371514 NEUROD1Q13562 356 aa19.89■□□□□ 0.78
SCP2-203ENST00000371514 TNIKQ9UKE5 1360 aa19.89■□□□□ 0.77
SCP2-203ENST00000371514 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
SCP2-203ENST00000371514 DIEXFQ68CQ4 756 aaKnown RBP19.88■□□□□ 0.77
SCP2-203ENST00000371514 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
SCP2-203ENST00000371514 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
SCP2-203ENST00000371514 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
SCP2-203ENST00000371514 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
SCP2-203ENST00000371514 GOLGA3Q08378 1498 aa19.76■□□□□ 0.75
SCP2-203ENST00000371514 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
SCP2-203ENST00000371514 EEA1Q15075 1411 aa19.71■□□□□ 0.75
SCP2-203ENST00000371514 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
SCP2-203ENST00000371514 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
SCP2-203ENST00000371514 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
SCP2-203ENST00000371514 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
SCP2-203ENST00000371514 CLIP1P30622 1438 aa19.65■□□□□ 0.74
SCP2-203ENST00000371514 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
SCP2-203ENST00000371514 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
SCP2-203ENST00000371514 MIER1Q8N108 512 aa19.54■□□□□ 0.72
SCP2-203ENST00000371514 APLP2Q06481 763 aa19.53■□□□□ 0.72
SCP2-203ENST00000371514 KIF21BO75037 1637 aa19.51■□□□□ 0.71
SCP2-203ENST00000371514 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
SCP2-203ENST00000371514 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
SCP2-203ENST00000371514 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
SCP2-203ENST00000371514 TOP2BQ02880 1626 aa19.39■□□□□ 0.69
SCP2-203ENST00000371514 ITGAEP38570 1179 aa19.39■□□□□ 0.69
SCP2-203ENST00000371514 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
SCP2-203ENST00000371514 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
SCP2-203ENST00000371514 ARAP1Q96P48 1450 aa19.32■□□□□ 0.68
SCP2-203ENST00000371514 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
SCP2-203ENST00000371514 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
SCP2-203ENST00000371514 CUX1P39880 1505 aa19.28■□□□□ 0.68
SCP2-203ENST00000371514 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
SCP2-203ENST00000371514 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
SCP2-203ENST00000371514 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
SCP2-203ENST00000371514 CFTRP13569 1480 aa19.17■□□□□ 0.66
SCP2-203ENST00000371514 P3H3Q8IVL6 736 aa19.17■□□□□ 0.66
SCP2-203ENST00000371514 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
SCP2-203ENST00000371514 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
SCP2-203ENST00000371514 ARHGAP35Q9NRY4 1499 aa19.12■□□□□ 0.65
SCP2-203ENST00000371514 ATP1B4Q9UN42 357 aaPredicted RBP19.12■□□□□ 0.65
SCP2-203ENST00000371514 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
SCP2-203ENST00000371514 KCNH8Q96L42 1107 aa19.07■□□□□ 0.64
SCP2-203ENST00000371514 CUX2O14529 1486 aa19.06■□□□□ 0.64
SCP2-203ENST00000371514 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
SCP2-203ENST00000371514 IGF1RP08069 1367 aa19.02■□□□□ 0.63
SCP2-203ENST00000371514 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.63
SCP2-203ENST00000371514 FAM50AQ14320 339 aaKnown RBP19■□□□□ 0.63
SCP2-203ENST00000371514 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
SCP2-203ENST00000371514 HIRIP3Q9BW71 556 aaPredicted RBP18.99■□□□□ 0.63
SCP2-203ENST00000371514 RAB3GAP2Q9H2M9 1393 aa18.98■□□□□ 0.63
SCP2-203ENST00000371514 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
SCP2-203ENST00000371514 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
SCP2-203ENST00000371514 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms