RNA–Protein interactions for RNA: ENST00000420568.5

SLC13A3-206, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-206ENST00000420568 NISCHQ9Y2I1 1504 aa40.09■■■■■ 4.01
SLC13A3-206ENST00000420568 CCDC180Q9P1Z9 1646 aa35.71■■■■□ 3.31
SLC13A3-206ENST00000420568 ABCC9O60706 1549 aa35.54■■■■□ 3.28
SLC13A3-206ENST00000420568 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
SLC13A3-206ENST00000420568 NACADO15069 1562 aa33.8■■■■□ 3
SLC13A3-206ENST00000420568 DCAF8L2P0C7V8 631 aa33.78■■■■□ 3
SLC13A3-206ENST00000420568 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
SLC13A3-206ENST00000420568 ZCCHC6Q5VYS8 1495 aaKnown RBP33.26■■■□□ 2.92
SLC13A3-206ENST00000420568 PABPN1Q86U42 306 aaKnown RBP eCLIP33.23■■■□□ 2.91
SLC13A3-206ENST00000420568 DNAJC5BQ9UF47 199 aa33.2■■■□□ 2.91
SLC13A3-206ENST00000420568 DCAF1Q9Y4B6 1507 aa33.14■■■□□ 2.9
SLC13A3-206ENST00000420568 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
SLC13A3-206ENST00000420568 BICRAQ9NZM4 1560 aa32.94■■■□□ 2.86
SLC13A3-206ENST00000420568 SCRIBQ14160 1630 aa32.58■■■□□ 2.81
SLC13A3-206ENST00000420568 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
SLC13A3-206ENST00000420568 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
SLC13A3-206ENST00000420568 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
SLC13A3-206ENST00000420568 CECR2Q9BXF3 1484 aa32.01■■■□□ 2.71
SLC13A3-206ENST00000420568 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
SLC13A3-206ENST00000420568 ATAD2BQ9ULI0 1458 aa31.19■■■□□ 2.58
SLC13A3-206ENST00000420568 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
SLC13A3-206ENST00000420568 SMARCA2P51531 1590 aa31.06■■■□□ 2.56
SLC13A3-206ENST00000420568 BAZ1AQ9NRL2 1556 aaPredicted RBP31.06■■■□□ 2.56
SLC13A3-206ENST00000420568 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
SLC13A3-206ENST00000420568 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
SLC13A3-206ENST00000420568 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
SLC13A3-206ENST00000420568 BAZ1BQ9UIG0 1483 aaKnown RBP30.86■■■□□ 2.53
SLC13A3-206ENST00000420568 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
SLC13A3-206ENST00000420568 NESP48681 1621 aa30.62■■■□□ 2.49
SLC13A3-206ENST00000420568 CUX2O14529 1486 aa30.53■■■□□ 2.48
SLC13A3-206ENST00000420568 WIZO95785 1651 aa30.45■■■□□ 2.46
SLC13A3-206ENST00000420568 LAMC3Q9Y6N6 1575 aa30.42■■■□□ 2.46
SLC13A3-206ENST00000420568 RSF1Q96T23 1441 aaPredicted RBP30.4■■■□□ 2.46
SLC13A3-206ENST00000420568 CADPSQ9ULU8 1353 aa30.35■■■□□ 2.45
SLC13A3-206ENST00000420568 PDS5BQ9NTI5 1447 aa30.32■■■□□ 2.44
SLC13A3-206ENST00000420568 DNAJC5Q9H3Z4 198 aa30.28■■■□□ 2.44
SLC13A3-206ENST00000420568 THOC2Q8NI27 1593 aaKnown RBP30.17■■■□□ 2.42
SLC13A3-206ENST00000420568 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
SLC13A3-206ENST00000420568 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
SLC13A3-206ENST00000420568 CFTRP13569 1480 aa30.04■■■□□ 2.4
SLC13A3-206ENST00000420568 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
SLC13A3-206ENST00000420568 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
SLC13A3-206ENST00000420568 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
SLC13A3-206ENST00000420568 WDR62O43379 1518 aa29.89■■■□□ 2.38
SLC13A3-206ENST00000420568 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
SLC13A3-206ENST00000420568 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
SLC13A3-206ENST00000420568 PRDM2Q13029 1718 aa29.49■■■□□ 2.31
SLC13A3-206ENST00000420568 TOPBP1Q92547 1522 aa29.39■■■□□ 2.3
SLC13A3-206ENST00000420568 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
SLC13A3-206ENST00000420568 IFT140Q96RY7 1462 aa29.35■■■□□ 2.29
SLC13A3-206ENST00000420568 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
SLC13A3-206ENST00000420568 OSCARQ8IYS5 282 aa29.28■■■□□ 2.28
SLC13A3-206ENST00000420568 DNMBPQ6XZF7 1577 aa29.27■■■□□ 2.28
SLC13A3-206ENST00000420568 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
SLC13A3-206ENST00000420568 POLA1P09884 1462 aaPredicted RBP29.11■■■□□ 2.25
SLC13A3-206ENST00000420568 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
SLC13A3-206ENST00000420568 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.24
SLC13A3-206ENST00000420568 SOGA1O94964 1423 aa29.04■■■□□ 2.24
SLC13A3-206ENST00000420568 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
SLC13A3-206ENST00000420568 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.24
SLC13A3-206ENST00000420568 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
SLC13A3-206ENST00000420568 CUX1P39880 1505 aa28.99■■■□□ 2.23
SLC13A3-206ENST00000420568 FGD5Q6ZNL6 1462 aa28.96■■■□□ 2.23
SLC13A3-206ENST00000420568 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.22
SLC13A3-206ENST00000420568 FBLN2P98095 1184 aa28.83■■■□□ 2.21
SLC13A3-206ENST00000420568 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
SLC13A3-206ENST00000420568 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
SLC13A3-206ENST00000420568 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
SLC13A3-206ENST00000420568 RIMBP3CA6NJZ7 1639 aa28.69■■■□□ 2.18
SLC13A3-206ENST00000420568 RIMBP3BA6NNM3 1639 aa28.69■■■□□ 2.18
SLC13A3-206ENST00000420568 RIMBP3Q9UFD9 1639 aa28.69■■■□□ 2.18
SLC13A3-206ENST00000420568 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
SLC13A3-206ENST00000420568 ARHGEF11O15085 1522 aa28.69■■■□□ 2.18
SLC13A3-206ENST00000420568 ABCA10Q8WWZ4 1543 aa28.68■■■□□ 2.18
SLC13A3-206ENST00000420568 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
SLC13A3-206ENST00000420568 CHD1O14646 1710 aa28.67■■■□□ 2.18
SLC13A3-206ENST00000420568 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
SLC13A3-206ENST00000420568 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.18
SLC13A3-206ENST00000420568 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
SLC13A3-206ENST00000420568 TOP2BQ02880 1626 aa28.57■■■□□ 2.16
SLC13A3-206ENST00000420568 CYB5RLQ6IPT4 315 aa28.56■■■□□ 2.16
SLC13A3-206ENST00000420568 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
SLC13A3-206ENST00000420568 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
SLC13A3-206ENST00000420568 BIVM-ERCC5R4GMW8 1640 aa28.52■■■□□ 2.16
SLC13A3-206ENST00000420568 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
SLC13A3-206ENST00000420568 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
SLC13A3-206ENST00000420568 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
SLC13A3-206ENST00000420568 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
SLC13A3-206ENST00000420568 FHAD1B1AJZ9 1412 aa28.33■■■□□ 2.13
SLC13A3-206ENST00000420568 ERICH3Q5RHP9 1530 aa28.3■■■□□ 2.12
SLC13A3-206ENST00000420568 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
SLC13A3-206ENST00000420568 NUP160Q12769 1436 aa28.26■■■□□ 2.12
SLC13A3-206ENST00000420568 CEP170Q5SW79 1584 aa28.17■■■□□ 2.1
SLC13A3-206ENST00000420568 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
SLC13A3-206ENST00000420568 IGF1RP08069 1367 aa28.11■■■□□ 2.09
SLC13A3-206ENST00000420568 KIF27Q86VH2 1401 aa28.1■■■□□ 2.09
SLC13A3-206ENST00000420568 ERCC6L2Q5T890 1561 aa28.05■■■□□ 2.08
SLC13A3-206ENST00000420568 JPH4Q96JJ6 628 aa28.05■■■□□ 2.08
SLC13A3-206ENST00000420568 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
SLC13A3-206ENST00000420568 PRG4Q92954 1404 aaPredicted RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms