Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.46■■■■□ 3.59not detected
MATR3P43243 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48not detected
MATR3P43243 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.43■■■■□ 3.42not detected
MATR3P43243 AL356512.1-201ENST00000607453 1739 ntBASIC36.39■■■■□ 3.42not detected
MATR3P43243 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4not detected
MATR3P43243 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39not detected
MATR3P43243 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.06■■■■□ 3.36not detected
MATR3P43243 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.7■■■■□ 3.31not detected
MATR3P43243 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.46■■■■□ 3.27not detected
MATR3P43243 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.4■■■■□ 3.26not detected
MATR3P43243 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.4■■■■□ 3.26not detected
MATR3P43243 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.24■■■■□ 3.23not detected
MATR3P43243 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23not detected
MATR3P43243 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.18■■■■□ 3.22not detected
MATR3P43243 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.07■■■■□ 3.21not detected
MATR3P43243 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.05■■■■□ 3.2not detected
MATR3P43243 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16not detected
MATR3P43243 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.77■■■■□ 3.16not detected
MATR3P43243 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.75■■■■□ 3.15not detected
MATR3P43243 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.62■■■■□ 3.13not detected
MATR3P43243 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.57■■■■□ 3.13not detected
MATR3P43243 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.52■■■■□ 3.12not detected
MATR3P43243 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09not detected
MATR3P43243 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06not detected
MATR3P43243 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04not detected
MATR3P43243 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02not detected
MATR3P43243 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.91■■■■□ 3.02not detected
MATR3P43243 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.81■■■■□ 3not detected
MATR3P43243 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.81■■■■□ 3not detected
MATR3P43243 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.8■■■■□ 3not detected
MATR3P43243 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.78■■■■□ 3not detected
MATR3P43243 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.73■■■□□ 2.99not detected
MATR3P43243 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99not detected
MATR3P43243 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98not detected
MATR3P43243 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98not detected
MATR3P43243 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.67■■■□□ 2.98not detected
MATR3P43243 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.6■■■□□ 2.97not detected
MATR3P43243 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96not detected
MATR3P43243 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.52■■■□□ 2.96not detected
MATR3P43243 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.49■■■□□ 2.95not detected
MATR3P43243 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95not detected
MATR3P43243 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.43■■■□□ 2.94not detected
MATR3P43243 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.37■■■□□ 2.93not detected
MATR3P43243 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93not detected
MATR3P43243 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.35■■■□□ 2.93not detected
MATR3P43243 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92not detected
MATR3P43243 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91not detected
MATR3P43243 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.9not detected
MATR3P43243 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9not detected
MATR3P43243 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.15■■■□□ 2.9not detected
MATR3P43243 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89not detected
MATR3P43243 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88not detected
MATR3P43243 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88not detected
MATR3P43243 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.04■■■□□ 2.88not detected
MATR3P43243 AC015813.7-201ENST00000623294 581 ntBASIC32.95■■■□□ 2.87not detected
MATR3P43243 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86not detected
MATR3P43243 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85not detected
MATR3P43243 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.79■■■□□ 2.84not detected
MATR3P43243 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84not detected
MATR3P43243 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.77■■■□□ 2.84not detected
MATR3P43243 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.71■■■□□ 2.83not detected
MATR3P43243 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.71■■■□□ 2.83not detected
MATR3P43243 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82not detected
MATR3P43243 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.65■■■□□ 2.82not detected
MATR3P43243 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8not detected
MATR3P43243 AC006077.2-201ENST00000623591 457 ntBASIC32.51■■■□□ 2.79not detected
MATR3P43243 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.49■■■□□ 2.79not detected
MATR3P43243 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.41■■■□□ 2.78not detected
MATR3P43243 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.41■■■□□ 2.78not detected
MATR3P43243 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.4■■■□□ 2.78not detected
MATR3P43243 ZNRF2P1-201ENST00000441407 443 ntBASIC32.38■■■□□ 2.77not detected
MATR3P43243 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.772e-7■■□□□ 14.4
MATR3P43243 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76not detected
MATR3P43243 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.29■■■□□ 2.76not detected
MATR3P43243 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75not detected
MATR3P43243 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75not detected
MATR3P43243 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75not detected
MATR3P43243 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74not detected
MATR3P43243 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74not detected
MATR3P43243 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.16■■■□□ 2.74not detected
MATR3P43243 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73not detected
MATR3P43243 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73not detected
MATR3P43243 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71not detected
MATR3P43243 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71not detected
MATR3P43243 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.97■■■□□ 2.71not detected
MATR3P43243 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.96■■■□□ 2.71not detected
MATR3P43243 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71not detected
MATR3P43243 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7not detected
MATR3P43243 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7not detected
MATR3P43243 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.9■■■□□ 2.7not detected
MATR3P43243 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7not detected
MATR3P43243 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69not detected
MATR3P43243 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.86■■■□□ 2.69not detected
MATR3P43243 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.86■■■□□ 2.69not detected
MATR3P43243 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69not detected
MATR3P43243 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.85■■■□□ 2.69not detected
MATR3P43243 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.81■■■□□ 2.68not detected
MATR3P43243 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67not detected
MATR3P43243 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.69■■■□□ 2.66not detected
MATR3P43243 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.68■■■□□ 2.66not detected
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms