RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 NISCHQ9Y2I1 1504 aa38.49■■■■□ 3.75
SCP2-201ENST00000371509 CCDC180Q9P1Z9 1646 aa33.86■■■■□ 3.01
SCP2-201ENST00000371509 ABCC9O60706 1549 aa32.63■■■□□ 2.81
SCP2-201ENST00000371509 ZCCHC6Q5VYS8 1495 aaKnown RBP32.21■■■□□ 2.75
SCP2-201ENST00000371509 DCAF8L2P0C7V8 631 aa32.04■■■□□ 2.72
SCP2-201ENST00000371509 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
SCP2-201ENST00000371509 NACADO15069 1562 aa31.67■■■□□ 2.66
SCP2-201ENST00000371509 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
SCP2-201ENST00000371509 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
SCP2-201ENST00000371509 SCRIBQ14160 1630 aa31.11■■■□□ 2.57
SCP2-201ENST00000371509 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
SCP2-201ENST00000371509 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
SCP2-201ENST00000371509 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
SCP2-201ENST00000371509 PABPN1Q86U42 306 aaKnown RBP eCLIP30.64■■■□□ 2.5
SCP2-201ENST00000371509 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
SCP2-201ENST00000371509 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
SCP2-201ENST00000371509 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
SCP2-201ENST00000371509 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
SCP2-201ENST00000371509 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
SCP2-201ENST00000371509 RSF1Q96T23 1441 aaPredicted RBP29.61■■■□□ 2.33
SCP2-201ENST00000371509 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
SCP2-201ENST00000371509 SUPT5HO00267 1087 aaKnown RBP29.5■■■□□ 2.31
SCP2-201ENST00000371509 WIZO95785 1651 aa29.49■■■□□ 2.31
SCP2-201ENST00000371509 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
SCP2-201ENST00000371509 PEG3Q9GZU2 1588 aa29.37■■■□□ 2.29
SCP2-201ENST00000371509 DNAJC5BQ9UF47 199 aa29.36■■■□□ 2.29
SCP2-201ENST00000371509 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
SCP2-201ENST00000371509 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
SCP2-201ENST00000371509 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.26
SCP2-201ENST00000371509 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
SCP2-201ENST00000371509 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
SCP2-201ENST00000371509 CCDC88BA6NC98 1476 aa28.82■■■□□ 2.2
SCP2-201ENST00000371509 NESP48681 1621 aa28.45■■■□□ 2.15
SCP2-201ENST00000371509 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
SCP2-201ENST00000371509 CFTRP13569 1480 aa28.41■■■□□ 2.14
SCP2-201ENST00000371509 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
SCP2-201ENST00000371509 PRDM2Q13029 1718 aa28.28■■■□□ 2.12
SCP2-201ENST00000371509 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.1
SCP2-201ENST00000371509 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
SCP2-201ENST00000371509 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
SCP2-201ENST00000371509 ABCC8Q09428 1581 aa28.05■■■□□ 2.08
SCP2-201ENST00000371509 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
SCP2-201ENST00000371509 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
SCP2-201ENST00000371509 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
SCP2-201ENST00000371509 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.06
SCP2-201ENST00000371509 CUX1P39880 1505 aa27.85■■■□□ 2.05
SCP2-201ENST00000371509 SYNJ1O43426 1573 aa27.84■■■□□ 2.05
SCP2-201ENST00000371509 URB2Q14146 1524 aaKnown RBP27.84■■■□□ 2.05
SCP2-201ENST00000371509 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
SCP2-201ENST00000371509 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
SCP2-201ENST00000371509 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
SCP2-201ENST00000371509 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
SCP2-201ENST00000371509 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
SCP2-201ENST00000371509 TOP2BQ02880 1626 aa27.75■■■□□ 2.03
SCP2-201ENST00000371509 BIVM-ERCC5R4GMW8 1640 aa27.74■■■□□ 2.03
SCP2-201ENST00000371509 WDR62O43379 1518 aa27.72■■■□□ 2.03
SCP2-201ENST00000371509 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
SCP2-201ENST00000371509 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
SCP2-201ENST00000371509 RAD54L2Q9Y4B4 1467 aa27.51■■■□□ 2
SCP2-201ENST00000371509 CUX2O14529 1486 aa27.5■■□□□ 1.99
SCP2-201ENST00000371509 SOGA1O94964 1423 aa27.48■■□□□ 1.99
SCP2-201ENST00000371509 TARBP1Q13395 1621 aaKnown RBP27.42■■□□□ 1.98
SCP2-201ENST00000371509 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
SCP2-201ENST00000371509 WDR97A6NE52 1622 aa27.37■■□□□ 1.97
SCP2-201ENST00000371509 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
SCP2-201ENST00000371509 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
SCP2-201ENST00000371509 ZNF608Q9ULD9 1512 aaPredicted RBP27.3■■□□□ 1.96
SCP2-201ENST00000371509 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
SCP2-201ENST00000371509 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
SCP2-201ENST00000371509 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
SCP2-201ENST00000371509 AQRO60306 1485 aaKnown RBP eCLIP27.23■■□□□ 1.95
SCP2-201ENST00000371509 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
SCP2-201ENST00000371509 EIF4G3O43432 1585 aaKnown RBP27.2■■□□□ 1.94
SCP2-201ENST00000371509 GAPVD1Q14C86 1478 aa27.17■■□□□ 1.94
SCP2-201ENST00000371509 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
SCP2-201ENST00000371509 EEA1Q15075 1411 aa27.11■■□□□ 1.93
SCP2-201ENST00000371509 CSRNP3Q8WYN3 585 aa27.06■■□□□ 1.92
SCP2-201ENST00000371509 IGF1RP08069 1367 aa27.06■■□□□ 1.92
SCP2-201ENST00000371509 GRIN2BQ13224 1484 aa27.04■■□□□ 1.92
SCP2-201ENST00000371509 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
SCP2-201ENST00000371509 SNAPC4Q5SXM2 1469 aa26.97■■□□□ 1.91
SCP2-201ENST00000371509 EHMT2Q96KQ7 1210 aa26.96■■□□□ 1.91
SCP2-201ENST00000371509 CUL7Q14999 1698 aa26.93■■□□□ 1.9
SCP2-201ENST00000371509 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
SCP2-201ENST00000371509 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
SCP2-201ENST00000371509 LOC105371045A0A1W2PR82 267 aa26.9■■□□□ 1.9
SCP2-201ENST00000371509 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.89
SCP2-201ENST00000371509 PRXQ9BXM0 1461 aa26.89■■□□□ 1.89
SCP2-201ENST00000371509 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
SCP2-201ENST00000371509 KIF21BO75037 1637 aa26.84■■□□□ 1.89
SCP2-201ENST00000371509 RAPGEF2Q9Y4G8 1499 aa26.83■■□□□ 1.89
SCP2-201ENST00000371509 FBLN2P98095 1184 aa26.81■■□□□ 1.88
SCP2-201ENST00000371509 SYNJ2O15056 1496 aa26.79■■□□□ 1.88
SCP2-201ENST00000371509 CHMP7Q8WUX9 453 aaPredicted RBP26.77■■□□□ 1.88
SCP2-201ENST00000371509 CHD1O14646 1710 aa26.75■■□□□ 1.87
SCP2-201ENST00000371509 GOLGA3Q08378 1498 aa26.75■■□□□ 1.87
SCP2-201ENST00000371509 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
SCP2-201ENST00000371509 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
SCP2-201ENST00000371509 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
SCP2-201ENST00000371509 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms