RNA–Protein interactions for RNA: ENST00000525384.1

NUP214-213, Transcript of nucleoporin 214, humanhuman

TSL 1 (best)

Gene NUP214, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-213ENST00000525384 AEBP2Q6ZN18 517 aaPredicted RBP26.43■■□□□ 1.82
NUP214-213ENST00000525384 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
NUP214-213ENST00000525384 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
NUP214-213ENST00000525384 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
NUP214-213ENST00000525384 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
NUP214-213ENST00000525384 FOXD1Q16676 465 aa20.87■□□□□ 0.93
NUP214-213ENST00000525384 ADRA2BP18089 450 aa19.94■□□□□ 0.78
NUP214-213ENST00000525384 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
NUP214-213ENST00000525384 PIAS4Q8N2W9 510 aaPredicted RBP19.69■□□□□ 0.74
NUP214-213ENST00000525384 MSH5O43196 834 aa19.39■□□□□ 0.69
NUP214-213ENST00000525384 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
NUP214-213ENST00000525384 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
NUP214-213ENST00000525384 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
NUP214-213ENST00000525384 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
NUP214-213ENST00000525384 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
NUP214-213ENST00000525384 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
NUP214-213ENST00000525384 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
NUP214-213ENST00000525384 KCNA4P22459 653 aa17.74■□□□□ 0.43
NUP214-213ENST00000525384 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
NUP214-213ENST00000525384 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
NUP214-213ENST00000525384 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
NUP214-213ENST00000525384 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
NUP214-213ENST00000525384 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
NUP214-213ENST00000525384 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
NUP214-213ENST00000525384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
NUP214-213ENST00000525384 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
NUP214-213ENST00000525384 NISCHQ9Y2I1 1504 aa16.58■□□□□ 0.24
NUP214-213ENST00000525384 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
NUP214-213ENST00000525384 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
NUP214-213ENST00000525384 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
NUP214-213ENST00000525384 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
NUP214-213ENST00000525384 ZBTB22O15209 634 aa16.29■□□□□ 0.2
NUP214-213ENST00000525384 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
NUP214-213ENST00000525384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
NUP214-213ENST00000525384 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
NUP214-213ENST00000525384 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
NUP214-213ENST00000525384 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
NUP214-213ENST00000525384 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
NUP214-213ENST00000525384 APLP2Q06481 763 aa16.13■□□□□ 0.17
NUP214-213ENST00000525384 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
NUP214-213ENST00000525384 CAPN15O75808 1086 aa15.95■□□□□ 0.14
NUP214-213ENST00000525384 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
NUP214-213ENST00000525384 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
NUP214-213ENST00000525384 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
NUP214-213ENST00000525384 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
NUP214-213ENST00000525384 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
NUP214-213ENST00000525384 DSG3P32926 999 aa15.69■□□□□ 0.1
NUP214-213ENST00000525384 ABCB7O75027 752 aa15.6■□□□□ 0.09
NUP214-213ENST00000525384 POLA2Q14181 598 aa15.53■□□□□ 0.08
NUP214-213ENST00000525384 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
NUP214-213ENST00000525384 FBLN2P98095 1184 aa15.22■□□□□ 0.03
NUP214-213ENST00000525384 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
NUP214-213ENST00000525384 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
NUP214-213ENST00000525384 OSCARQ8IYS5 282 aa15.02■□□□□ -0
NUP214-213ENST00000525384 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
NUP214-213ENST00000525384 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
NUP214-213ENST00000525384 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
NUP214-213ENST00000525384 SPDYE2Q495Y8 402 aa14.89□□□□□ -0.03
NUP214-213ENST00000525384 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
NUP214-213ENST00000525384 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
NUP214-213ENST00000525384 ABCC9O60706 1549 aa14.76□□□□□ -0.05
NUP214-213ENST00000525384 SSUH2Q9Y2M2 353 aa14.74□□□□□ -0.05
NUP214-213ENST00000525384 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
NUP214-213ENST00000525384 REM2Q8IYK8 340 aaPredicted RBP14.61□□□□□ -0.07
NUP214-213ENST00000525384 FKBP8Q14318 412 aa14.6□□□□□ -0.07
NUP214-213ENST00000525384 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
NUP214-213ENST00000525384 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
NUP214-213ENST00000525384 PROM2Q8N271 834 aa14.46□□□□□ -0.09
NUP214-213ENST00000525384 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
NUP214-213ENST00000525384 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
NUP214-213ENST00000525384 CLEC11AQ9Y240 323 aa14.4□□□□□ -0.1
NUP214-213ENST00000525384 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
NUP214-213ENST00000525384 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
NUP214-213ENST00000525384 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.13
NUP214-213ENST00000525384 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
NUP214-213ENST00000525384 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
NUP214-213ENST00000525384 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
NUP214-213ENST00000525384 POTEHQ6S545 545 aa14.1□□□□□ -0.15
NUP214-213ENST00000525384 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
NUP214-213ENST00000525384 NACADO15069 1562 aa14.04□□□□□ -0.16
NUP214-213ENST00000525384 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
NUP214-213ENST00000525384 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
NUP214-213ENST00000525384 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
NUP214-213ENST00000525384 MIER1Q8N108 512 aa13.98□□□□□ -0.17
NUP214-213ENST00000525384 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
NUP214-213ENST00000525384 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
NUP214-213ENST00000525384 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
NUP214-213ENST00000525384 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.19
NUP214-213ENST00000525384 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
NUP214-213ENST00000525384 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
NUP214-213ENST00000525384 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
NUP214-213ENST00000525384 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.2
NUP214-213ENST00000525384 UNC13AQ9UPW8 1703 aa13.83□□□□□ -0.2
NUP214-213ENST00000525384 HAX1O00165 279 aa13.78□□□□□ -0.2
NUP214-213ENST00000525384 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
NUP214-213ENST00000525384 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
NUP214-213ENST00000525384 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
NUP214-213ENST00000525384 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
NUP214-213ENST00000525384 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
NUP214-213ENST00000525384 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms