RNA–Protein interactions for RNA: ENST00000528114.1

NUP214-218, Transcript of nucleoporin 214, humanhuman

TSL 4

Gene NUP214, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-218ENST00000528114 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
NUP214-218ENST00000528114 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
NUP214-218ENST00000528114 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
NUP214-218ENST00000528114 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
NUP214-218ENST00000528114 FOXD1Q16676 465 aa18.69■□□□□ 0.58
NUP214-218ENST00000528114 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
NUP214-218ENST00000528114 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
NUP214-218ENST00000528114 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
NUP214-218ENST00000528114 ADRA2BP18089 450 aa17.61■□□□□ 0.41
NUP214-218ENST00000528114 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
NUP214-218ENST00000528114 MSH5O43196 834 aa17.57■□□□□ 0.4
NUP214-218ENST00000528114 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
NUP214-218ENST00000528114 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
NUP214-218ENST00000528114 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.2
NUP214-218ENST00000528114 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
NUP214-218ENST00000528114 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
NUP214-218ENST00000528114 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
NUP214-218ENST00000528114 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
NUP214-218ENST00000528114 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
NUP214-218ENST00000528114 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
NUP214-218ENST00000528114 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
NUP214-218ENST00000528114 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
NUP214-218ENST00000528114 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
NUP214-218ENST00000528114 ABCC9O60706 1549 aa15.46■□□□□ 0.07
NUP214-218ENST00000528114 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
NUP214-218ENST00000528114 MYO15BQ96JP2 1530 aa15.28■□□□□ 0.04
NUP214-218ENST00000528114 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
NUP214-218ENST00000528114 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
NUP214-218ENST00000528114 NACADO15069 1562 aa15.2■□□□□ 0.02
NUP214-218ENST00000528114 KCNA4P22459 653 aa15.12■□□□□ 0.01
NUP214-218ENST00000528114 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
NUP214-218ENST00000528114 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
NUP214-218ENST00000528114 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
NUP214-218ENST00000528114 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
NUP214-218ENST00000528114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
NUP214-218ENST00000528114 SCRIBQ14160 1630 aa14.82□□□□□ -0.04
NUP214-218ENST00000528114 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
NUP214-218ENST00000528114 SHROOM4Q9ULL8 1493 aa14.79□□□□□ -0.04
NUP214-218ENST00000528114 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
NUP214-218ENST00000528114 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
NUP214-218ENST00000528114 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
NUP214-218ENST00000528114 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
NUP214-218ENST00000528114 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
NUP214-218ENST00000528114 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
NUP214-218ENST00000528114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
NUP214-218ENST00000528114 APLP2Q06481 763 aa14.36□□□□□ -0.11
NUP214-218ENST00000528114 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
NUP214-218ENST00000528114 CECR2Q9BXF3 1484 aa14.33□□□□□ -0.12
NUP214-218ENST00000528114 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
NUP214-218ENST00000528114 CAPN15O75808 1086 aa14.28□□□□□ -0.12
NUP214-218ENST00000528114 SMARCA4P51532 1647 aa14.25□□□□□ -0.13
NUP214-218ENST00000528114 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
NUP214-218ENST00000528114 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
NUP214-218ENST00000528114 SAMD1Q6SPF0 538 aaPredicted RBP14.23□□□□□ -0.13
NUP214-218ENST00000528114 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
NUP214-218ENST00000528114 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
NUP214-218ENST00000528114 SPINK5Q9NQ38 1064 aaPredicted RBP14.17□□□□□ -0.14
NUP214-218ENST00000528114 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
NUP214-218ENST00000528114 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
NUP214-218ENST00000528114 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
NUP214-218ENST00000528114 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
NUP214-218ENST00000528114 WIZO95785 1651 aa14.1□□□□□ -0.15
NUP214-218ENST00000528114 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
NUP214-218ENST00000528114 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
NUP214-218ENST00000528114 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
NUP214-218ENST00000528114 DSG3P32926 999 aa14.04□□□□□ -0.16
NUP214-218ENST00000528114 NCAPD3P42695 1498 aa14.03□□□□□ -0.16
NUP214-218ENST00000528114 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
NUP214-218ENST00000528114 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
NUP214-218ENST00000528114 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
NUP214-218ENST00000528114 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
NUP214-218ENST00000528114 ABCB7O75027 752 aa13.88□□□□□ -0.19
NUP214-218ENST00000528114 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
NUP214-218ENST00000528114 ZBTB22O15209 634 aa13.82□□□□□ -0.2
NUP214-218ENST00000528114 POLA2Q14181 598 aa13.73□□□□□ -0.21
NUP214-218ENST00000528114 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
NUP214-218ENST00000528114 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
NUP214-218ENST00000528114 CFTRP13569 1480 aa13.64□□□□□ -0.23
NUP214-218ENST00000528114 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
NUP214-218ENST00000528114 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
NUP214-218ENST00000528114 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.23
NUP214-218ENST00000528114 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
NUP214-218ENST00000528114 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
NUP214-218ENST00000528114 NESP48681 1621 aa13.5□□□□□ -0.25
NUP214-218ENST00000528114 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
NUP214-218ENST00000528114 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
NUP214-218ENST00000528114 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
NUP214-218ENST00000528114 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
NUP214-218ENST00000528114 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
NUP214-218ENST00000528114 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
NUP214-218ENST00000528114 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
NUP214-218ENST00000528114 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
NUP214-218ENST00000528114 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
NUP214-218ENST00000528114 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
NUP214-218ENST00000528114 FBLN2P98095 1184 aa13.35□□□□□ -0.27
NUP214-218ENST00000528114 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
NUP214-218ENST00000528114 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
NUP214-218ENST00000528114 CUX1P39880 1505 aa13.34□□□□□ -0.27
NUP214-218ENST00000528114 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
NUP214-218ENST00000528114 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms