RNA–Protein interactions for RNA: ENST00000483497.6

NUP214-208, Transcript of nucleoporin 214, humanhuman

TSL 2 BASIC

Gene NUP214, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-208ENST00000483497 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
NUP214-208ENST00000483497 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
NUP214-208ENST00000483497 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
NUP214-208ENST00000483497 ABCC9O60706 1549 aa15.23■□□□□ 0.03
NUP214-208ENST00000483497 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
NUP214-208ENST00000483497 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
NUP214-208ENST00000483497 SHROOM4Q9ULL8 1493 aa14.93□□□□□ -0.02
NUP214-208ENST00000483497 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
NUP214-208ENST00000483497 NACADO15069 1562 aa14.81□□□□□ -0.04
NUP214-208ENST00000483497 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
NUP214-208ENST00000483497 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
NUP214-208ENST00000483497 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
NUP214-208ENST00000483497 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
NUP214-208ENST00000483497 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
NUP214-208ENST00000483497 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
NUP214-208ENST00000483497 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
NUP214-208ENST00000483497 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
NUP214-208ENST00000483497 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
NUP214-208ENST00000483497 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
NUP214-208ENST00000483497 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
NUP214-208ENST00000483497 WIZO95785 1651 aa14.01□□□□□ -0.17
NUP214-208ENST00000483497 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
NUP214-208ENST00000483497 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
NUP214-208ENST00000483497 PEG3Q9GZU2 1588 aa13.81□□□□□ -0.2
NUP214-208ENST00000483497 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
NUP214-208ENST00000483497 SMARCA2P51531 1590 aa13.77□□□□□ -0.21
NUP214-208ENST00000483497 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
NUP214-208ENST00000483497 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
NUP214-208ENST00000483497 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
NUP214-208ENST00000483497 NCAPD3P42695 1498 aa13.69□□□□□ -0.22
NUP214-208ENST00000483497 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
NUP214-208ENST00000483497 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
NUP214-208ENST00000483497 CHIC1Q5VXU3 224 aa13.58□□□□□ -0.24
NUP214-208ENST00000483497 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
NUP214-208ENST00000483497 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
NUP214-208ENST00000483497 CFTRP13569 1480 aa13.37□□□□□ -0.27
NUP214-208ENST00000483497 NESP48681 1621 aa13.36□□□□□ -0.27
NUP214-208ENST00000483497 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
NUP214-208ENST00000483497 WRNQ14191 1432 aaPredicted RBP eCLIP13.28□□□□□ -0.28
NUP214-208ENST00000483497 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
NUP214-208ENST00000483497 SYNJ1O43426 1573 aa13.26□□□□□ -0.29
NUP214-208ENST00000483497 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
NUP214-208ENST00000483497 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
NUP214-208ENST00000483497 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
NUP214-208ENST00000483497 CUX1P39880 1505 aa13.19□□□□□ -0.3
NUP214-208ENST00000483497 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
NUP214-208ENST00000483497 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
NUP214-208ENST00000483497 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
NUP214-208ENST00000483497 SOGA1O94964 1423 aa13.14□□□□□ -0.31
NUP214-208ENST00000483497 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
NUP214-208ENST00000483497 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
NUP214-208ENST00000483497 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
NUP214-208ENST00000483497 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
NUP214-208ENST00000483497 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
NUP214-208ENST00000483497 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
NUP214-208ENST00000483497 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
NUP214-208ENST00000483497 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
NUP214-208ENST00000483497 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
NUP214-208ENST00000483497 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
NUP214-208ENST00000483497 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
NUP214-208ENST00000483497 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
NUP214-208ENST00000483497 MRC2Q9UBG0 1479 aa13□□□□□ -0.33
NUP214-208ENST00000483497 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
NUP214-208ENST00000483497 CUX2O14529 1486 aa12.96□□□□□ -0.33
NUP214-208ENST00000483497 EEA1Q15075 1411 aa12.95□□□□□ -0.34
NUP214-208ENST00000483497 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
NUP214-208ENST00000483497 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
NUP214-208ENST00000483497 WDR62O43379 1518 aa12.93□□□□□ -0.34
NUP214-208ENST00000483497 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.35
NUP214-208ENST00000483497 TDRD9Q8NDG6 1382 aaKnown RBP12.89□□□□□ -0.35
NUP214-208ENST00000483497 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
NUP214-208ENST00000483497 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
NUP214-208ENST00000483497 IGF1RP08069 1367 aa12.86□□□□□ -0.35
NUP214-208ENST00000483497 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
NUP214-208ENST00000483497 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
NUP214-208ENST00000483497 KIF21BO75037 1637 aa12.84□□□□□ -0.35
NUP214-208ENST00000483497 GOLGA3Q08378 1498 aa12.83□□□□□ -0.36
NUP214-208ENST00000483497 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
NUP214-208ENST00000483497 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
NUP214-208ENST00000483497 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.361e-8■■■■■ 35.6
NUP214-208ENST00000483497 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
NUP214-208ENST00000483497 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
NUP214-208ENST00000483497 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
NUP214-208ENST00000483497 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
NUP214-208ENST00000483497 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
NUP214-208ENST00000483497 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
NUP214-208ENST00000483497 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
NUP214-208ENST00000483497 PBRM1Q86U86 1689 aa12.74□□□□□ -0.37
NUP214-208ENST00000483497 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
NUP214-208ENST00000483497 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
NUP214-208ENST00000483497 CUL7Q14999 1698 aa12.71□□□□□ -0.37
NUP214-208ENST00000483497 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
NUP214-208ENST00000483497 SNAPC4Q5SXM2 1469 aa12.67□□□□□ -0.38
NUP214-208ENST00000483497 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
NUP214-208ENST00000483497 CLIP1P30622 1438 aa12.65□□□□□ -0.38
NUP214-208ENST00000483497 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
NUP214-208ENST00000483497 FBLN2P98095 1184 aa12.61□□□□□ -0.39
NUP214-208ENST00000483497 CTTNBP2Q8WZ74 1663 aa12.58□□□□□ -0.4
NUP214-208ENST00000483497 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
NUP214-208ENST00000483497 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms