RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
UBE2N-205ENST00000550657 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
UBE2N-205ENST00000550657 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
UBE2N-205ENST00000550657 SUPT5HO00267 1087 aaKnown RBP16.12■□□□□ 0.17
UBE2N-205ENST00000550657 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
UBE2N-205ENST00000550657 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
UBE2N-205ENST00000550657 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
UBE2N-205ENST00000550657 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
UBE2N-205ENST00000550657 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
UBE2N-205ENST00000550657 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
UBE2N-205ENST00000550657 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
UBE2N-205ENST00000550657 PCGF6Q9BYE7 350 aa15.13■□□□□ 0.01
UBE2N-205ENST00000550657 ABCC9O60706 1549 aa15.1■□□□□ 0.01
UBE2N-205ENST00000550657 RSF1Q96T23 1441 aaPredicted RBP15.02■□□□□ -0
UBE2N-205ENST00000550657 NACADO15069 1562 aa14.98□□□□□ -0.01
UBE2N-205ENST00000550657 HRCP23327 699 aa14.98□□□□□ -0.01
UBE2N-205ENST00000550657 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
UBE2N-205ENST00000550657 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
UBE2N-205ENST00000550657 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
UBE2N-205ENST00000550657 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
UBE2N-205ENST00000550657 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
UBE2N-205ENST00000550657 PPARGC1BQ86YN6 1023 aaKnown RBP14.82□□□□□ -0.04
UBE2N-205ENST00000550657 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
UBE2N-205ENST00000550657 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
UBE2N-205ENST00000550657 WIZO95785 1651 aa14.65□□□□□ -0.06
UBE2N-205ENST00000550657 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
UBE2N-205ENST00000550657 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
UBE2N-205ENST00000550657 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
UBE2N-205ENST00000550657 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
UBE2N-205ENST00000550657 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
UBE2N-205ENST00000550657 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
UBE2N-205ENST00000550657 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
UBE2N-205ENST00000550657 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
UBE2N-205ENST00000550657 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
UBE2N-205ENST00000550657 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.11
UBE2N-205ENST00000550657 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
UBE2N-205ENST00000550657 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
UBE2N-205ENST00000550657 SOGA1O94964 1423 aa14.29□□□□□ -0.12
UBE2N-205ENST00000550657 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
UBE2N-205ENST00000550657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
UBE2N-205ENST00000550657 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
UBE2N-205ENST00000550657 RUSC2Q8N2Y8 1516 aa14.21□□□□□ -0.13
UBE2N-205ENST00000550657 CCER1Q8TC90 406 aaPredicted RBP14.21□□□□□ -0.13
UBE2N-205ENST00000550657 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
UBE2N-205ENST00000550657 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
UBE2N-205ENST00000550657 RANGAP1P46060 587 aaPredicted RBP14.16□□□□□ -0.14
UBE2N-205ENST00000550657 WRNQ14191 1432 aaPredicted RBP eCLIP14.13□□□□□ -0.15
UBE2N-205ENST00000550657 TNIKQ9UKE5 1360 aa14.11□□□□□ -0.15
UBE2N-205ENST00000550657 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
UBE2N-205ENST00000550657 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
UBE2N-205ENST00000550657 EEA1Q15075 1411 aa14.06□□□□□ -0.16
UBE2N-205ENST00000550657 GOLGA3Q08378 1498 aa14.03□□□□□ -0.16
UBE2N-205ENST00000550657 SYNJ1O43426 1573 aa14□□□□□ -0.17
UBE2N-205ENST00000550657 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
UBE2N-205ENST00000550657 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
UBE2N-205ENST00000550657 APLP2Q06481 763 aa13.94□□□□□ -0.18
UBE2N-205ENST00000550657 CLIP1P30622 1438 aa13.93□□□□□ -0.18
UBE2N-205ENST00000550657 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
UBE2N-205ENST00000550657 DIEXFQ68CQ4 756 aaKnown RBP13.87□□□□□ -0.19
UBE2N-205ENST00000550657 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
UBE2N-205ENST00000550657 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
UBE2N-205ENST00000550657 SCAF1Q9H7N4 1312 aaKnown RBP13.83□□□□□ -0.2
UBE2N-205ENST00000550657 KIF21BO75037 1637 aa13.82□□□□□ -0.2
UBE2N-205ENST00000550657 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
UBE2N-205ENST00000550657 TOP2BQ02880 1626 aa13.77□□□□□ -0.2
UBE2N-205ENST00000550657 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
UBE2N-205ENST00000550657 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
UBE2N-205ENST00000550657 CUX1P39880 1505 aa13.72□□□□□ -0.21
UBE2N-205ENST00000550657 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
UBE2N-205ENST00000550657 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.22
UBE2N-205ENST00000550657 KIF27Q86VH2 1401 aa13.7□□□□□ -0.22
UBE2N-205ENST00000550657 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
UBE2N-205ENST00000550657 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
UBE2N-205ENST00000550657 YTHDC1Q96MU7 727 aaKnown RBP13.68□□□□□ -0.22
UBE2N-205ENST00000550657 ITGAEP38570 1179 aa13.68□□□□□ -0.22
UBE2N-205ENST00000550657 CFTRP13569 1480 aa13.67□□□□□ -0.22
UBE2N-205ENST00000550657 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
UBE2N-205ENST00000550657 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
UBE2N-205ENST00000550657 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
UBE2N-205ENST00000550657 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
UBE2N-205ENST00000550657 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
UBE2N-205ENST00000550657 CUX2O14529 1486 aa13.61□□□□□ -0.23
UBE2N-205ENST00000550657 ATP1B4Q9UN42 357 aaPredicted RBP13.6□□□□□ -0.23
UBE2N-205ENST00000550657 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
UBE2N-205ENST00000550657 GTF3C3Q9Y5Q9 886 aa13.6□□□□□ -0.23
UBE2N-205ENST00000550657 MIER1Q8N108 512 aa13.58□□□□□ -0.23
UBE2N-205ENST00000550657 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.24
UBE2N-205ENST00000550657 IGF1RP08069 1367 aa13.57□□□□□ -0.24
UBE2N-205ENST00000550657 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
UBE2N-205ENST00000550657 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
UBE2N-205ENST00000550657 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
UBE2N-205ENST00000550657 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
UBE2N-205ENST00000550657 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
UBE2N-205ENST00000550657 FAM50AQ14320 339 aaKnown RBP13.47□□□□□ -0.25
UBE2N-205ENST00000550657 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.26
UBE2N-205ENST00000550657 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
UBE2N-205ENST00000550657 RAD54L2Q9Y4B4 1467 aa13.44□□□□□ -0.26
UBE2N-205ENST00000550657 NESP48681 1621 aa13.42□□□□□ -0.26
UBE2N-205ENST00000550657 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
UBE2N-205ENST00000550657 FHOD3Q2V2M9 1422 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms