RNA–Protein interactions for RNA: ENST00000481170.1

GMPPA-211, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 2

Gene GMPPA, Length 4,942 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-211ENST00000481170 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
GMPPA-211ENST00000481170 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
GMPPA-211ENST00000481170 SUPT5HO00267 1087 aaKnown RBP21.47■■□□□ 1.03
GMPPA-211ENST00000481170 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
GMPPA-211ENST00000481170 APLP2Q06481 763 aa20.2■□□□□ 0.82
GMPPA-211ENST00000481170 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
GMPPA-211ENST00000481170 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
GMPPA-211ENST00000481170 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
GMPPA-211ENST00000481170 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
GMPPA-211ENST00000481170 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
GMPPA-211ENST00000481170 PELP1Q8IZL8 1130 aaKnown RBP19.78■□□□□ 0.76
GMPPA-211ENST00000481170 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.74
GMPPA-211ENST00000481170 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
GMPPA-211ENST00000481170 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
GMPPA-211ENST00000481170 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
GMPPA-211ENST00000481170 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
GMPPA-211ENST00000481170 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
GMPPA-211ENST00000481170 RANGAP1P46060 587 aaPredicted RBP19.43■□□□□ 0.7
GMPPA-211ENST00000481170 HRCP23327 699 aa19.34■□□□□ 0.69
GMPPA-211ENST00000481170 ABCC9O60706 1549 aa19.32■□□□□ 0.68
GMPPA-211ENST00000481170 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
GMPPA-211ENST00000481170 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
GMPPA-211ENST00000481170 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
GMPPA-211ENST00000481170 LOC105371045A0A1W2PR82 267 aa19.26■□□□□ 0.67
GMPPA-211ENST00000481170 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
GMPPA-211ENST00000481170 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.621e-5■□□□□ 8.6
GMPPA-211ENST00000481170 NEFLP07196 543 aa18.86■□□□□ 0.61
GMPPA-211ENST00000481170 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.6
GMPPA-211ENST00000481170 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
GMPPA-211ENST00000481170 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
GMPPA-211ENST00000481170 MYT1Q01538 1121 aa18.77■□□□□ 0.6
GMPPA-211ENST00000481170 ITGAEP38570 1179 aa18.76■□□□□ 0.59
GMPPA-211ENST00000481170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
GMPPA-211ENST00000481170 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
GMPPA-211ENST00000481170 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
GMPPA-211ENST00000481170 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
GMPPA-211ENST00000481170 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
GMPPA-211ENST00000481170 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
GMPPA-211ENST00000481170 NACADO15069 1562 aa18.55■□□□□ 0.56
GMPPA-211ENST00000481170 FAM50AQ14320 339 aaKnown RBP18.51■□□□□ 0.55
GMPPA-211ENST00000481170 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
GMPPA-211ENST00000481170 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.54
GMPPA-211ENST00000481170 EEA1Q15075 1411 aa18.33■□□□□ 0.52
GMPPA-211ENST00000481170 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
GMPPA-211ENST00000481170 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
GMPPA-211ENST00000481170 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
GMPPA-211ENST00000481170 NEUROD1Q13562 356 aa18.23■□□□□ 0.51
GMPPA-211ENST00000481170 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
GMPPA-211ENST00000481170 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
GMPPA-211ENST00000481170 ANP32CO43423 234 aa18.16■□□□□ 0.5
GMPPA-211ENST00000481170 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
GMPPA-211ENST00000481170 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
GMPPA-211ENST00000481170 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
GMPPA-211ENST00000481170 GOLGA3Q08378 1498 aa18.12■□□□□ 0.49
GMPPA-211ENST00000481170 FBLN2P98095 1184 aa18.09■□□□□ 0.49
GMPPA-211ENST00000481170 CLIP1P30622 1438 aa18.09■□□□□ 0.49
GMPPA-211ENST00000481170 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.48
GMPPA-211ENST00000481170 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.48
GMPPA-211ENST00000481170 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
GMPPA-211ENST00000481170 DAXXQ9UER7 740 aaPredicted RBP18.06■□□□□ 0.48
GMPPA-211ENST00000481170 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.48
GMPPA-211ENST00000481170 CEP162Q5TB80 1403 aa18.01■□□□□ 0.47
GMPPA-211ENST00000481170 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
GMPPA-211ENST00000481170 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
GMPPA-211ENST00000481170 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
GMPPA-211ENST00000481170 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
GMPPA-211ENST00000481170 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
GMPPA-211ENST00000481170 KIF27Q86VH2 1401 aa17.92■□□□□ 0.46
GMPPA-211ENST00000481170 ZNF326Q5BKZ1 582 aaKnown RBP17.92■□□□□ 0.46
GMPPA-211ENST00000481170 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
GMPPA-211ENST00000481170 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
GMPPA-211ENST00000481170 ZNF777Q9ULD5 760 aaPredicted RBP17.85■□□□□ 0.45
GMPPA-211ENST00000481170 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
GMPPA-211ENST00000481170 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
GMPPA-211ENST00000481170 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
GMPPA-211ENST00000481170 BCANQ96GW7 911 aa17.75■□□□□ 0.43
GMPPA-211ENST00000481170 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
GMPPA-211ENST00000481170 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
GMPPA-211ENST00000481170 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.42
GMPPA-211ENST00000481170 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
GMPPA-211ENST00000481170 TSPY4P0CV99 314 aa17.68■□□□□ 0.42
GMPPA-211ENST00000481170 TSPY10P0CW01 314 aa17.68■□□□□ 0.42
GMPPA-211ENST00000481170 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
GMPPA-211ENST00000481170 DDX10Q13206 875 aaKnown RBP17.66■□□□□ 0.42
GMPPA-211ENST00000481170 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
GMPPA-211ENST00000481170 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
GMPPA-211ENST00000481170 SOGA1O94964 1423 aa17.64■□□□□ 0.41
GMPPA-211ENST00000481170 NPM1P06748 294 aaKnown RBP eCLIP17.61■□□□□ 0.41
GMPPA-211ENST00000481170 NEFMP07197 916 aa17.58■□□□□ 0.4
GMPPA-211ENST00000481170 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.4
GMPPA-211ENST00000481170 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
GMPPA-211ENST00000481170 WIZO95785 1651 aa17.57■□□□□ 0.4
GMPPA-211ENST00000481170 CUX2O14529 1486 aa17.55■□□□□ 0.4
GMPPA-211ENST00000481170 HNRNPUQ00839 825 aaKnown RBP eCLIP17.55■□□□□ 0.4
GMPPA-211ENST00000481170 EIF4G2P78344 907 aaKnown RBP eCLIP17.54■□□□□ 0.4
GMPPA-211ENST00000481170 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
GMPPA-211ENST00000481170 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
GMPPA-211ENST00000481170 MIER1Q8N108 512 aa17.52■□□□□ 0.4
GMPPA-211ENST00000481170 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
GMPPA-211ENST00000481170 CANXP27824 592 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms