RNA–Protein interactions for RNA: ENST00000407246.6

SCP2-204, Transcript of sterol carrier protein 2, humanhuman

TSL 2 BASIC

Gene SCP2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-204ENST00000407246 NISCHQ9Y2I1 1504 aa35.81■■■■□ 3.32
SCP2-204ENST00000407246 CCDC180Q9P1Z9 1646 aa30.89■■■□□ 2.54
SCP2-204ENST00000407246 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
SCP2-204ENST00000407246 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
SCP2-204ENST00000407246 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
SCP2-204ENST00000407246 DCAF1Q9Y4B6 1507 aa29.44■■■□□ 2.3
SCP2-204ENST00000407246 ABCC9O60706 1549 aa29.17■■■□□ 2.26
SCP2-204ENST00000407246 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
SCP2-204ENST00000407246 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
SCP2-204ENST00000407246 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
SCP2-204ENST00000407246 NACADO15069 1562 aa28.71■■■□□ 2.19
SCP2-204ENST00000407246 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
SCP2-204ENST00000407246 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
SCP2-204ENST00000407246 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
SCP2-204ENST00000407246 CECR2Q9BXF3 1484 aa27.96■■■□□ 2.07
SCP2-204ENST00000407246 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
SCP2-204ENST00000407246 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
SCP2-204ENST00000407246 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
SCP2-204ENST00000407246 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
SCP2-204ENST00000407246 WIZO95785 1651 aa27.6■■■□□ 2.01
SCP2-204ENST00000407246 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
SCP2-204ENST00000407246 HRCP23327 699 aa27.46■■□□□ 1.99
SCP2-204ENST00000407246 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
SCP2-204ENST00000407246 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
SCP2-204ENST00000407246 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
SCP2-204ENST00000407246 CCDC88BA6NC98 1476 aa27.02■■□□□ 1.92
SCP2-204ENST00000407246 SMARCA2P51531 1590 aa27■■□□□ 1.91
SCP2-204ENST00000407246 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
SCP2-204ENST00000407246 LOC105371045A0A1W2PR82 267 aa26.96■■□□□ 1.91
SCP2-204ENST00000407246 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
SCP2-204ENST00000407246 PPARGC1BQ86YN6 1023 aaKnown RBP26.93■■□□□ 1.9
SCP2-204ENST00000407246 EIF4G1Q04637 1599 aaKnown RBP26.93■■□□□ 1.9
SCP2-204ENST00000407246 ATAD2BQ9ULI0 1458 aa26.92■■□□□ 1.9
SCP2-204ENST00000407246 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
SCP2-204ENST00000407246 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
SCP2-204ENST00000407246 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
SCP2-204ENST00000407246 TRIM26Q12899 539 aaPredicted RBP26.57■■□□□ 1.84
SCP2-204ENST00000407246 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
SCP2-204ENST00000407246 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
SCP2-204ENST00000407246 EHMT2Q96KQ7 1210 aa26.43■■□□□ 1.82
SCP2-204ENST00000407246 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
SCP2-204ENST00000407246 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
SCP2-204ENST00000407246 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
SCP2-204ENST00000407246 SOGA1O94964 1423 aa26.25■■□□□ 1.79
SCP2-204ENST00000407246 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
SCP2-204ENST00000407246 CFTRP13569 1480 aa26.1■■□□□ 1.77
SCP2-204ENST00000407246 ZEB1P37275 1124 aaPredicted RBP26.08■■□□□ 1.77
SCP2-204ENST00000407246 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
SCP2-204ENST00000407246 CSRNP3Q8WYN3 585 aa26■■□□□ 1.75
SCP2-204ENST00000407246 EEA1Q15075 1411 aa25.99■■□□□ 1.75
SCP2-204ENST00000407246 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
SCP2-204ENST00000407246 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
SCP2-204ENST00000407246 CUX1P39880 1505 aa25.93■■□□□ 1.74
SCP2-204ENST00000407246 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
SCP2-204ENST00000407246 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
SCP2-204ENST00000407246 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
SCP2-204ENST00000407246 GOLGA3Q08378 1498 aa25.78■■□□□ 1.72
SCP2-204ENST00000407246 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
SCP2-204ENST00000407246 NESP48681 1621 aa25.77■■□□□ 1.72
SCP2-204ENST00000407246 CEP162Q5TB80 1403 aa25.74■■□□□ 1.71
SCP2-204ENST00000407246 KIF21BO75037 1637 aa25.72■■□□□ 1.71
SCP2-204ENST00000407246 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
SCP2-204ENST00000407246 FANCD2Q9BXW9 1451 aa25.7■■□□□ 1.7
SCP2-204ENST00000407246 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
SCP2-204ENST00000407246 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
SCP2-204ENST00000407246 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
SCP2-204ENST00000407246 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
SCP2-204ENST00000407246 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
SCP2-204ENST00000407246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
SCP2-204ENST00000407246 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
SCP2-204ENST00000407246 CUX2O14529 1486 aa25.5■■□□□ 1.67
SCP2-204ENST00000407246 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
SCP2-204ENST00000407246 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
SCP2-204ENST00000407246 RANGAP1P46060 587 aaPredicted RBP25.45■■□□□ 1.66
SCP2-204ENST00000407246 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
SCP2-204ENST00000407246 CLIP1P30622 1438 aa25.43■■□□□ 1.66
SCP2-204ENST00000407246 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
SCP2-204ENST00000407246 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
SCP2-204ENST00000407246 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
SCP2-204ENST00000407246 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.66
SCP2-204ENST00000407246 IGF1RP08069 1367 aa25.38■■□□□ 1.65
SCP2-204ENST00000407246 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
SCP2-204ENST00000407246 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
SCP2-204ENST00000407246 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
SCP2-204ENST00000407246 ABCA10Q8WWZ4 1543 aa25.28■■□□□ 1.64
SCP2-204ENST00000407246 PELP1Q8IZL8 1130 aaKnown RBP25.28■■□□□ 1.64
SCP2-204ENST00000407246 CARMIL1Q5VZK9 1371 aa25.24■■□□□ 1.63
SCP2-204ENST00000407246 VPS8Q8N3P4 1428 aa25.23■■□□□ 1.63
SCP2-204ENST00000407246 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
SCP2-204ENST00000407246 ACIN1Q9UKV3 1341 aaKnown RBP25.16■■□□□ 1.62
SCP2-204ENST00000407246 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
SCP2-204ENST00000407246 NEUROD1Q13562 356 aa25.13■■□□□ 1.61
SCP2-204ENST00000407246 TDRD9Q8NDG6 1382 aaKnown RBP25.12■■□□□ 1.61
SCP2-204ENST00000407246 DIEXFQ68CQ4 756 aaKnown RBP25.12■■□□□ 1.61
SCP2-204ENST00000407246 ARHGAP35Q9NRY4 1499 aa25.07■■□□□ 1.6
SCP2-204ENST00000407246 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
SCP2-204ENST00000407246 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
SCP2-204ENST00000407246 TARBP1Q13395 1621 aaKnown RBP25.03■■□□□ 1.6
SCP2-204ENST00000407246 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
SCP2-204ENST00000407246 CUL7Q14999 1698 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms