RNA–Protein interactions for RNA: ENST00000573311.1

SRRM2-213, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 732 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-213ENST00000573311 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
SRRM2-213ENST00000573311 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
SRRM2-213ENST00000573311 ABCC9O60706 1549 aa31.94■■■□□ 2.7
SRRM2-213ENST00000573311 RB1CC1Q8TDY2 1594 aa30.66■■■□□ 2.5
SRRM2-213ENST00000573311 NACADO15069 1562 aa30.6■■■□□ 2.49
SRRM2-213ENST00000573311 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
SRRM2-213ENST00000573311 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
SRRM2-213ENST00000573311 ZCCHC6Q5VYS8 1495 aaKnown RBP30.26■■■□□ 2.44
SRRM2-213ENST00000573311 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
SRRM2-213ENST00000573311 UNC13AQ9UPW8 1703 aa29.89■■■□□ 2.38
SRRM2-213ENST00000573311 PABPN1Q86U42 306 aaKnown RBP eCLIP29.87■■■□□ 2.37
SRRM2-213ENST00000573311 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
SRRM2-213ENST00000573311 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
SRRM2-213ENST00000573311 SCRIBQ14160 1630 aa29.52■■■□□ 2.32
SRRM2-213ENST00000573311 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
SRRM2-213ENST00000573311 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
SRRM2-213ENST00000573311 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
SRRM2-213ENST00000573311 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
SRRM2-213ENST00000573311 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
SRRM2-213ENST00000573311 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
SRRM2-213ENST00000573311 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
SRRM2-213ENST00000573311 ATAD2BQ9ULI0 1458 aa28.22■■■□□ 2.11
SRRM2-213ENST00000573311 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
SRRM2-213ENST00000573311 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
SRRM2-213ENST00000573311 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
SRRM2-213ENST00000573311 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
SRRM2-213ENST00000573311 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
SRRM2-213ENST00000573311 WIZO95785 1651 aa27.71■■■□□ 2.03
SRRM2-213ENST00000573311 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
SRRM2-213ENST00000573311 NESP48681 1621 aa27.58■■■□□ 2.01
SRRM2-213ENST00000573311 ERCC6Q03468 1493 aa27.56■■■□□ 2
SRRM2-213ENST00000573311 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
SRRM2-213ENST00000573311 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.98
SRRM2-213ENST00000573311 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
SRRM2-213ENST00000573311 PDS5BQ9NTI5 1447 aa27.39■■□□□ 1.97
SRRM2-213ENST00000573311 CUX2O14529 1486 aa27.38■■□□□ 1.97
SRRM2-213ENST00000573311 CFTRP13569 1480 aa27.22■■□□□ 1.95
SRRM2-213ENST00000573311 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
SRRM2-213ENST00000573311 THOC2Q8NI27 1593 aaKnown RBP27.17■■□□□ 1.94
SRRM2-213ENST00000573311 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
SRRM2-213ENST00000573311 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
SRRM2-213ENST00000573311 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
SRRM2-213ENST00000573311 CEP164Q9UPV0 1460 aa27.04■■□□□ 1.92
SRRM2-213ENST00000573311 WDR62O43379 1518 aa26.96■■□□□ 1.91
SRRM2-213ENST00000573311 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
SRRM2-213ENST00000573311 PRDM2Q13029 1718 aa26.88■■□□□ 1.89
SRRM2-213ENST00000573311 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
SRRM2-213ENST00000573311 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
SRRM2-213ENST00000573311 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
SRRM2-213ENST00000573311 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
SRRM2-213ENST00000573311 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
SRRM2-213ENST00000573311 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
SRRM2-213ENST00000573311 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
SRRM2-213ENST00000573311 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
SRRM2-213ENST00000573311 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
SRRM2-213ENST00000573311 SOGA1O94964 1423 aa26.31■■□□□ 1.8
SRRM2-213ENST00000573311 CUX1P39880 1505 aa26.31■■□□□ 1.8
SRRM2-213ENST00000573311 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
SRRM2-213ENST00000573311 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
SRRM2-213ENST00000573311 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
SRRM2-213ENST00000573311 AQRO60306 1485 aaKnown RBP eCLIP26.24■■□□□ 1.791e-17■■■□□ 16.7
SRRM2-213ENST00000573311 EIF4G3O43432 1585 aaKnown RBP26.21■■□□□ 1.79
SRRM2-213ENST00000573311 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
SRRM2-213ENST00000573311 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
SRRM2-213ENST00000573311 WRNQ14191 1432 aaPredicted RBP eCLIP26.1■■□□□ 1.77
SRRM2-213ENST00000573311 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
SRRM2-213ENST00000573311 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
SRRM2-213ENST00000573311 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
SRRM2-213ENST00000573311 GRIN2BQ13224 1484 aa26■■□□□ 1.75
SRRM2-213ENST00000573311 FBLN2P98095 1184 aa25.98■■□□□ 1.75
SRRM2-213ENST00000573311 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
SRRM2-213ENST00000573311 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
SRRM2-213ENST00000573311 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
SRRM2-213ENST00000573311 SNAPC4Q5SXM2 1469 aa25.94■■□□□ 1.74
SRRM2-213ENST00000573311 CHD1O14646 1710 aa25.92■■□□□ 1.74
SRRM2-213ENST00000573311 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
SRRM2-213ENST00000573311 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
SRRM2-213ENST00000573311 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
SRRM2-213ENST00000573311 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
SRRM2-213ENST00000573311 TRIM41Q8WV44 630 aa25.81■■□□□ 1.72
SRRM2-213ENST00000573311 RIMBP3CA6NJZ7 1639 aa25.76■■□□□ 1.71
SRRM2-213ENST00000573311 RIMBP3BA6NNM3 1639 aa25.76■■□□□ 1.71
SRRM2-213ENST00000573311 RIMBP3Q9UFD9 1639 aa25.76■■□□□ 1.71
SRRM2-213ENST00000573311 ARHGEF11O15085 1522 aa25.75■■□□□ 1.71
SRRM2-213ENST00000573311 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
SRRM2-213ENST00000573311 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
SRRM2-213ENST00000573311 FHAD1B1AJZ9 1412 aa25.68■■□□□ 1.7
SRRM2-213ENST00000573311 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
SRRM2-213ENST00000573311 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
SRRM2-213ENST00000573311 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
SRRM2-213ENST00000573311 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
SRRM2-213ENST00000573311 NUP160Q12769 1436 aa25.56■■□□□ 1.68
SRRM2-213ENST00000573311 IGF1RP08069 1367 aa25.56■■□□□ 1.68
SRRM2-213ENST00000573311 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
SRRM2-213ENST00000573311 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
SRRM2-213ENST00000573311 CUL7Q14999 1698 aa25.39■■□□□ 1.66
SRRM2-213ENST00000573311 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
SRRM2-213ENST00000573311 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
SRRM2-213ENST00000573311 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
SRRM2-213ENST00000573311 KIAA0586Q9BVV6 1533 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms