RNA–Protein interactions for RNA: ENST00000571041.1

SRRM2-206, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 4

Gene SRRM2, Length 498 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-206ENST00000571041 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
SRRM2-206ENST00000571041 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
SRRM2-206ENST00000571041 ABCC9O60706 1549 aa33.66■■■□□ 2.98
SRRM2-206ENST00000571041 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
SRRM2-206ENST00000571041 NACADO15069 1562 aa31.96■■■□□ 2.71
SRRM2-206ENST00000571041 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
SRRM2-206ENST00000571041 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
SRRM2-206ENST00000571041 DNAJC5BQ9UF47 199 aa31.46■■■□□ 2.63
SRRM2-206ENST00000571041 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
SRRM2-206ENST00000571041 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
SRRM2-206ENST00000571041 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
SRRM2-206ENST00000571041 UNC13AQ9UPW8 1703 aa31.27■■■□□ 2.6
SRRM2-206ENST00000571041 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
SRRM2-206ENST00000571041 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
SRRM2-206ENST00000571041 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
SRRM2-206ENST00000571041 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
SRRM2-206ENST00000571041 CC2D2AQ9P2K1 1620 aa30.39■■■□□ 2.46
SRRM2-206ENST00000571041 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
SRRM2-206ENST00000571041 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
SRRM2-206ENST00000571041 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
SRRM2-206ENST00000571041 SMARCA4P51532 1647 aa29.45■■■□□ 2.3
SRRM2-206ENST00000571041 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
SRRM2-206ENST00000571041 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
SRRM2-206ENST00000571041 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
SRRM2-206ENST00000571041 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
SRRM2-206ENST00000571041 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
SRRM2-206ENST00000571041 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
SRRM2-206ENST00000571041 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
SRRM2-206ENST00000571041 NESP48681 1621 aa28.98■■■□□ 2.23
SRRM2-206ENST00000571041 CUX2O14529 1486 aa28.93■■■□□ 2.22
SRRM2-206ENST00000571041 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
SRRM2-206ENST00000571041 WIZO95785 1651 aa28.77■■■□□ 2.2
SRRM2-206ENST00000571041 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
SRRM2-206ENST00000571041 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
SRRM2-206ENST00000571041 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
SRRM2-206ENST00000571041 PDS5BQ9NTI5 1447 aa28.67■■■□□ 2.18
SRRM2-206ENST00000571041 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
SRRM2-206ENST00000571041 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
SRRM2-206ENST00000571041 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
SRRM2-206ENST00000571041 CFTRP13569 1480 aa28.38■■■□□ 2.13
SRRM2-206ENST00000571041 MRC2Q9UBG0 1479 aa28.38■■■□□ 2.13
SRRM2-206ENST00000571041 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
SRRM2-206ENST00000571041 CEP164Q9UPV0 1460 aa28.3■■■□□ 2.12
SRRM2-206ENST00000571041 WDR62O43379 1518 aa28.29■■■□□ 2.12
SRRM2-206ENST00000571041 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
SRRM2-206ENST00000571041 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
SRRM2-206ENST00000571041 PRDM2Q13029 1718 aa27.93■■■□□ 2.06
SRRM2-206ENST00000571041 TOPBP1Q92547 1522 aa27.79■■■□□ 2.04
SRRM2-206ENST00000571041 ABCC8Q09428 1581 aa27.75■■■□□ 2.03
SRRM2-206ENST00000571041 IFT140Q96RY7 1462 aa27.75■■■□□ 2.03
SRRM2-206ENST00000571041 ZNF608Q9ULD9 1512 aaPredicted RBP27.69■■■□□ 2.02
SRRM2-206ENST00000571041 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
SRRM2-206ENST00000571041 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
SRRM2-206ENST00000571041 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
SRRM2-206ENST00000571041 POLA1P09884 1462 aaPredicted RBP27.53■■■□□ 2
SRRM2-206ENST00000571041 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
SRRM2-206ENST00000571041 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
SRRM2-206ENST00000571041 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
SRRM2-206ENST00000571041 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.992e-17■■■■□ 20.4
SRRM2-206ENST00000571041 RAD54L2Q9Y4B4 1467 aa27.43■■□□□ 1.98
SRRM2-206ENST00000571041 SOGA1O94964 1423 aa27.42■■□□□ 1.98
SRRM2-206ENST00000571041 CUX1P39880 1505 aa27.39■■□□□ 1.98
SRRM2-206ENST00000571041 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
SRRM2-206ENST00000571041 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
SRRM2-206ENST00000571041 FBLN2P98095 1184 aa27.25■■□□□ 1.95
SRRM2-206ENST00000571041 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
SRRM2-206ENST00000571041 RIMBP3CA6NJZ7 1639 aa27.21■■□□□ 1.95
SRRM2-206ENST00000571041 RIMBP3BA6NNM3 1639 aa27.21■■□□□ 1.95
SRRM2-206ENST00000571041 RIMBP3Q9UFD9 1639 aa27.21■■□□□ 1.95
SRRM2-206ENST00000571041 ARHGEF11O15085 1522 aa27.19■■□□□ 1.94
SRRM2-206ENST00000571041 CHD1O14646 1710 aa27.19■■□□□ 1.94
SRRM2-206ENST00000571041 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
SRRM2-206ENST00000571041 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
SRRM2-206ENST00000571041 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
SRRM2-206ENST00000571041 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
SRRM2-206ENST00000571041 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
SRRM2-206ENST00000571041 GAPVD1Q14C86 1478 aa27.08■■□□□ 1.93
SRRM2-206ENST00000571041 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
SRRM2-206ENST00000571041 SYNJ2O15056 1496 aa27.04■■□□□ 1.92
SRRM2-206ENST00000571041 CYB5RLQ6IPT4 315 aa27.02■■□□□ 1.92
SRRM2-206ENST00000571041 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
SRRM2-206ENST00000571041 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
SRRM2-206ENST00000571041 CLASP1Q7Z460 1538 aa26.97■■□□□ 1.91
SRRM2-206ENST00000571041 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
SRRM2-206ENST00000571041 BIVM-ERCC5R4GMW8 1640 aa26.96■■□□□ 1.91
SRRM2-206ENST00000571041 ARAP1Q96P48 1450 aa26.95■■□□□ 1.91
SRRM2-206ENST00000571041 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
SRRM2-206ENST00000571041 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
SRRM2-206ENST00000571041 ADAMTS12P58397 1594 aa26.76■■□□□ 1.87
SRRM2-206ENST00000571041 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
SRRM2-206ENST00000571041 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
SRRM2-206ENST00000571041 NUP160Q12769 1436 aa26.72■■□□□ 1.87
SRRM2-206ENST00000571041 CEP170Q5SW79 1584 aa26.66■■□□□ 1.86
SRRM2-206ENST00000571041 TRHP20396 242 aaPredicted RBP26.61■■□□□ 1.85
SRRM2-206ENST00000571041 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
SRRM2-206ENST00000571041 IGF1RP08069 1367 aa26.52■■□□□ 1.84
SRRM2-206ENST00000571041 SHROOM2Q13796 1616 aa26.51■■□□□ 1.83
SRRM2-206ENST00000571041 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
SRRM2-206ENST00000571041 JPH4Q96JJ6 628 aa26.47■■□□□ 1.83
SRRM2-206ENST00000571041 PRG4Q92954 1404 aaPredicted RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms