RNA–Protein interactions for RNA: ENST00000301740.12

SRRM2-201, Transcript of serine/arginine repetitive matrix 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM2, Length 9,353 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-201ENST00000301740 PELP1Q8IZL8 1130 aaKnown RBP28.64■■■□□ 2.18
SRRM2-201ENST00000301740 MYT1Q01538 1121 aa27.82■■■□□ 2.04
SRRM2-201ENST00000301740 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
SRRM2-201ENST00000301740 ERICH6Q7L0X2 663 aa26.96■■□□□ 1.91
SRRM2-201ENST00000301740 CENPBP07199 599 aaPredicted RBP26.59■■□□□ 1.85
SRRM2-201ENST00000301740 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
SRRM2-201ENST00000301740 YTHDC1Q96MU7 727 aaKnown RBP26.42■■□□□ 1.82
SRRM2-201ENST00000301740 TTBK1Q5TCY1 1321 aaPredicted RBP26.11■■□□□ 1.77
SRRM2-201ENST00000301740 ZEB1P37275 1124 aaPredicted RBP26.08■■□□□ 1.77
SRRM2-201ENST00000301740 APLP2Q06481 763 aa26.07■■□□□ 1.76
SRRM2-201ENST00000301740 NEFLP07196 543 aa25.99■■□□□ 1.75
SRRM2-201ENST00000301740 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
SRRM2-201ENST00000301740 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
SRRM2-201ENST00000301740 DAXXQ9UER7 740 aaPredicted RBP25.65■■□□□ 1.7
SRRM2-201ENST00000301740 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
SRRM2-201ENST00000301740 RTL5Q5HYW3 569 aaPredicted RBP25.2■■□□□ 1.63
SRRM2-201ENST00000301740 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
SRRM2-201ENST00000301740 ZNF316A6NFI3 1004 aaPredicted RBP24.97■■□□□ 1.59
SRRM2-201ENST00000301740 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
SRRM2-201ENST00000301740 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
SRRM2-201ENST00000301740 GLIPR1L2Q4G1C9 344 aa24.68■■□□□ 1.54
SRRM2-201ENST00000301740 CLSPNQ9HAW4 1339 aa24.36■■□□□ 1.49
SRRM2-201ENST00000301740 TRIM26Q12899 539 aaPredicted RBP24.32■■□□□ 1.48
SRRM2-201ENST00000301740 MYT1LQ9UL68 1186 aa24.26■■□□□ 1.47
SRRM2-201ENST00000301740 HRCP23327 699 aa24.26■■□□□ 1.47
SRRM2-201ENST00000301740 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
SRRM2-201ENST00000301740 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
SRRM2-201ENST00000301740 ATP1B4Q9UN42 357 aaPredicted RBP24.11■■□□□ 1.45
SRRM2-201ENST00000301740 ANP32BQ92688 251 aaKnown RBP24.1■■□□□ 1.45
SRRM2-201ENST00000301740 CDK11AQ9UQ88 783 aaPredicted RBP24.05■■□□□ 1.44
SRRM2-201ENST00000301740 RANGAP1P46060 587 aaPredicted RBP23.97■■□□□ 1.43
SRRM2-201ENST00000301740 ANP32AP39687 249 aaKnown RBP23.95■■□□□ 1.42
SRRM2-201ENST00000301740 EIF5BO60841 1220 aaKnown RBP23.91■■□□□ 1.42
SRRM2-201ENST00000301740 DIEXFQ68CQ4 756 aaKnown RBP23.91■■□□□ 1.42
SRRM2-201ENST00000301740 ZBTB47Q9UFB7 747 aaPredicted RBP23.9■■□□□ 1.42
SRRM2-201ENST00000301740 POLR3GLQ9BT43 218 aa23.78■■□□□ 1.4
SRRM2-201ENST00000301740 GTF3C3Q9Y5Q9 886 aa23.62■■□□□ 1.37
SRRM2-201ENST00000301740 TNNT2P45379 298 aaPredicted RBP23.6■■□□□ 1.37
SRRM2-201ENST00000301740 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
SRRM2-201ENST00000301740 ANP32CO43423 234 aa23.49■■□□□ 1.35
SRRM2-201ENST00000301740 NEFMP07197 916 aa23.49■■□□□ 1.35
SRRM2-201ENST00000301740 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
SRRM2-201ENST00000301740 UPF2Q9HAU5 1272 aaKnown RBP23.46■■□□□ 1.35
SRRM2-201ENST00000301740 HSP90AA1P07900 732 aaKnown RBP23.46■■□□□ 1.35
SRRM2-201ENST00000301740 BCANQ96GW7 911 aa23.35■■□□□ 1.33
SRRM2-201ENST00000301740 ITGAEP38570 1179 aa23.3■■□□□ 1.32
SRRM2-201ENST00000301740 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
SRRM2-201ENST00000301740 TRIM44Q96DX7 344 aaPredicted RBP23.25■■□□□ 1.31
SRRM2-201ENST00000301740 ANP32EQ9BTT0 268 aa23.25■■□□□ 1.31
SRRM2-201ENST00000301740 ACIN1Q9UKV3 1341 aaKnown RBP23.24■■□□□ 1.31
SRRM2-201ENST00000301740 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
SRRM2-201ENST00000301740 HNRNPUL2Q1KMD3 747 aaKnown RBP23.19■■□□□ 1.3
SRRM2-201ENST00000301740 CDK11BP21127 795 aaKnown RBP23.15■■□□□ 1.3
SRRM2-201ENST00000301740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
SRRM2-201ENST00000301740 NCLP19338 710 aaKnown RBP23.1■■□□□ 1.29
SRRM2-201ENST00000301740 NPM2Q86SE8 214 aaKnown RBP23.1■■□□□ 1.29
SRRM2-201ENST00000301740 ERICH6BQ5W0A0 696 aa22.95■■□□□ 1.26
SRRM2-201ENST00000301740 NBR1Q14596 966 aa22.93■■□□□ 1.26
SRRM2-201ENST00000301740 DDRGK1Q96HY6 314 aa22.91■■□□□ 1.26
SRRM2-201ENST00000301740 BECN1Q14457 450 aa22.9■■□□□ 1.26
SRRM2-201ENST00000301740 GOLGA6L22H0YM25 854 aa22.87■■□□□ 1.25
SRRM2-201ENST00000301740 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.85■■□□□ 1.25
SRRM2-201ENST00000301740 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.24
SRRM2-201ENST00000301740 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
SRRM2-201ENST00000301740 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
SRRM2-201ENST00000301740 SLC24A1O60721 1099 aa22.78■■□□□ 1.24
SRRM2-201ENST00000301740 NEUROD1Q13562 356 aa22.75■■□□□ 1.23
SRRM2-201ENST00000301740 FKBP8Q14318 412 aa22.74■■□□□ 1.23
SRRM2-201ENST00000301740 BCL11AQ9H165 835 aa22.73■■□□□ 1.23
SRRM2-201ENST00000301740 CCDC136Q96JN2 1154 aa22.7■■□□□ 1.23
SRRM2-201ENST00000301740 GOLGA6L6A8MZA4 724 aa22.69■■□□□ 1.22
SRRM2-201ENST00000301740 MYH16Q9H6N6 1097 aa22.66■■□□□ 1.22
SRRM2-201ENST00000301740 ZRSR1Q15695 479 aaKnown RBP22.66■■□□□ 1.22
SRRM2-201ENST00000301740 ARXQ96QS3 562 aa22.66■■□□□ 1.22
SRRM2-201ENST00000301740 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
SRRM2-201ENST00000301740 CHAF1AQ13111 956 aaPredicted RBP22.65■■□□□ 1.22
SRRM2-201ENST00000301740 PTMAP06454 111 aaKnown RBP22.65■■□□□ 1.22
SRRM2-201ENST00000301740 DNTTIP2Q5QJE6 756 aaKnown RBP22.64■■□□□ 1.21
SRRM2-201ENST00000301740 NAP1L5Q96NT1 182 aaPredicted RBP22.63■■□□□ 1.21
SRRM2-201ENST00000301740 NRDCO43847 1150 aa22.58■■□□□ 1.2
SRRM2-201ENST00000301740 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
SRRM2-201ENST00000301740 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
SRRM2-201ENST00000301740 HNRNPUQ00839 825 aaKnown RBP eCLIP22.48■■□□□ 1.19
SRRM2-201ENST00000301740 CASC1Q6TDU7 716 aa22.47■■□□□ 1.19
SRRM2-201ENST00000301740 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
SRRM2-201ENST00000301740 TONSLQ96HA7 1378 aa22.45■■□□□ 1.18
SRRM2-201ENST00000301740 L1TD1Q5T7N2 865 aaKnown RBP22.44■■□□□ 1.18
SRRM2-201ENST00000301740 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
SRRM2-201ENST00000301740 MSNP26038 577 aaKnown RBP22.33■■□□□ 1.17
SRRM2-201ENST00000301740 TNNT3P45378 269 aaPredicted RBP22.26■■□□□ 1.15
SRRM2-201ENST00000301740 USP35Q9P2H5 1018 aa22.26■■□□□ 1.15
SRRM2-201ENST00000301740 WDR43Q15061 677 aaKnown RBP eCLIP22.26■■□□□ 1.152e-7■■□□□ 12
SRRM2-201ENST00000301740 TMC1Q8TDI8 760 aa22.25■■□□□ 1.15
SRRM2-201ENST00000301740 PTMSP20962 102 aa22.23■■□□□ 1.15
SRRM2-201ENST00000301740 NOP58Q9Y2X3 529 aaKnown RBP22.22■■□□□ 1.15
SRRM2-201ENST00000301740 CALRP27797 417 aaKnown RBP22.18■■□□□ 1.14
SRRM2-201ENST00000301740 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
SRRM2-201ENST00000301740 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
SRRM2-201ENST00000301740 SETQ01105 290 aaPredicted RBP22.1■■□□□ 1.13
SRRM2-201ENST00000301740 CHMP4BQ9H444 224 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms