RNA–Protein interactions for RNA: ENST00000453861.6

NUP214-204, Transcript of nucleoporin 214, humanhuman

TSL 5

Gene NUP214, Length 3,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-204ENST00000453861 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
NUP214-204ENST00000453861 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
NUP214-204ENST00000453861 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
NUP214-204ENST00000453861 DCAF8L2P0C7V8 631 aa16.99■□□□□ 0.31
NUP214-204ENST00000453861 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
NUP214-204ENST00000453861 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
NUP214-204ENST00000453861 HRCP23327 699 aa16.75■□□□□ 0.27
NUP214-204ENST00000453861 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
NUP214-204ENST00000453861 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
NUP214-204ENST00000453861 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.26
NUP214-204ENST00000453861 PPARGC1BQ86YN6 1023 aaKnown RBP16.51■□□□□ 0.23
NUP214-204ENST00000453861 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
NUP214-204ENST00000453861 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
NUP214-204ENST00000453861 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
NUP214-204ENST00000453861 ABCC9O60706 1549 aa16.04■□□□□ 0.16
NUP214-204ENST00000453861 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
NUP214-204ENST00000453861 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
NUP214-204ENST00000453861 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
NUP214-204ENST00000453861 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
NUP214-204ENST00000453861 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
NUP214-204ENST00000453861 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
NUP214-204ENST00000453861 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
NUP214-204ENST00000453861 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
NUP214-204ENST00000453861 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
NUP214-204ENST00000453861 NACADO15069 1562 aa15.67■□□□□ 0.1
NUP214-204ENST00000453861 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
NUP214-204ENST00000453861 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
NUP214-204ENST00000453861 WIZO95785 1651 aa15.56■□□□□ 0.08
NUP214-204ENST00000453861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
NUP214-204ENST00000453861 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
NUP214-204ENST00000453861 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
NUP214-204ENST00000453861 TTBK1Q5TCY1 1321 aaPredicted RBP15.41■□□□□ 0.06
NUP214-204ENST00000453861 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
NUP214-204ENST00000453861 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
NUP214-204ENST00000453861 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
NUP214-204ENST00000453861 EIF4G1Q04637 1599 aaKnown RBP15.35■□□□□ 0.05
NUP214-204ENST00000453861 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
NUP214-204ENST00000453861 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
NUP214-204ENST00000453861 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
NUP214-204ENST00000453861 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.04
NUP214-204ENST00000453861 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
NUP214-204ENST00000453861 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
NUP214-204ENST00000453861 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
NUP214-204ENST00000453861 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
NUP214-204ENST00000453861 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.02
NUP214-204ENST00000453861 SOGA1O94964 1423 aa15.15■□□□□ 0.02
NUP214-204ENST00000453861 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
NUP214-204ENST00000453861 YTHDC1Q96MU7 727 aaKnown RBP15.13■□□□□ 0.01
NUP214-204ENST00000453861 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
NUP214-204ENST00000453861 UBTFP17480 764 aaKnown RBP15.09■□□□□ 0.01
NUP214-204ENST00000453861 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
NUP214-204ENST00000453861 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0.01
NUP214-204ENST00000453861 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
NUP214-204ENST00000453861 TNIKQ9UKE5 1360 aa15.05■□□□□ -0
NUP214-204ENST00000453861 BICRAQ9NZM4 1560 aa15.02■□□□□ -0
NUP214-204ENST00000453861 EEA1Q15075 1411 aa15□□□□□ -0.01
NUP214-204ENST00000453861 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
NUP214-204ENST00000453861 MIER1Q8N108 512 aa14.98□□□□□ -0.01
NUP214-204ENST00000453861 RANGAP1P46060 587 aaPredicted RBP14.95□□□□□ -0.02
NUP214-204ENST00000453861 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
NUP214-204ENST00000453861 MYT1Q01538 1121 aa14.92□□□□□ -0.02
NUP214-204ENST00000453861 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
NUP214-204ENST00000453861 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
NUP214-204ENST00000453861 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
NUP214-204ENST00000453861 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
NUP214-204ENST00000453861 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
NUP214-204ENST00000453861 CLIP1P30622 1438 aa14.8□□□□□ -0.04
NUP214-204ENST00000453861 KIF21BO75037 1637 aa14.8□□□□□ -0.04
NUP214-204ENST00000453861 APLP2Q06481 763 aa14.79□□□□□ -0.04
NUP214-204ENST00000453861 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.05
NUP214-204ENST00000453861 VPS8Q8N3P4 1428 aa14.73□□□□□ -0.05
NUP214-204ENST00000453861 TOP2BQ02880 1626 aa14.67□□□□□ -0.06
NUP214-204ENST00000453861 SUPT16HQ9Y5B9 1047 aaKnown RBP14.62□□□□□ -0.07
NUP214-204ENST00000453861 DHX57Q6P158 1386 aaKnown RBP14.61□□□□□ -0.07
NUP214-204ENST00000453861 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
NUP214-204ENST00000453861 PRXQ9BXM0 1461 aa14.57□□□□□ -0.08
NUP214-204ENST00000453861 KANK4Q5T7N3 995 aaPredicted RBP14.56□□□□□ -0.08
NUP214-204ENST00000453861 ARAP1Q96P48 1450 aa14.55□□□□□ -0.08
NUP214-204ENST00000453861 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
NUP214-204ENST00000453861 CUX1P39880 1505 aa14.54□□□□□ -0.08
NUP214-204ENST00000453861 ERICH3Q5RHP9 1530 aa14.54□□□□□ -0.08
NUP214-204ENST00000453861 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
NUP214-204ENST00000453861 ITGAEP38570 1179 aa14.53□□□□□ -0.08
NUP214-204ENST00000453861 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
NUP214-204ENST00000453861 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
NUP214-204ENST00000453861 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
NUP214-204ENST00000453861 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
NUP214-204ENST00000453861 CFTRP13569 1480 aa14.45□□□□□ -0.1
NUP214-204ENST00000453861 BCANQ96GW7 911 aa14.43□□□□□ -0.1
NUP214-204ENST00000453861 ARHGAP35Q9NRY4 1499 aa14.41□□□□□ -0.1
NUP214-204ENST00000453861 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
NUP214-204ENST00000453861 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
NUP214-204ENST00000453861 CUX2O14529 1486 aa14.36□□□□□ -0.11
NUP214-204ENST00000453861 IGF1RP08069 1367 aa14.34□□□□□ -0.11
NUP214-204ENST00000453861 DDX10Q13206 875 aaKnown RBP14.34□□□□□ -0.11
NUP214-204ENST00000453861 RAB3GAP2Q9H2M9 1393 aa14.34□□□□□ -0.11
NUP214-204ENST00000453861 ANP32EQ9BTT0 268 aa14.34□□□□□ -0.11
NUP214-204ENST00000453861 FKBP8Q14318 412 aa14.33□□□□□ -0.12
NUP214-204ENST00000453861 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
NUP214-204ENST00000453861 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms