RNA–Protein interactions for RNA: ENST00000572883.1

SRRM2-211, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 887 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-211ENST00000572883 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
SRRM2-211ENST00000572883 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
SRRM2-211ENST00000572883 ABCC9O60706 1549 aa21.77■■□□□ 1.08
SRRM2-211ENST00000572883 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1.01
SRRM2-211ENST00000572883 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
SRRM2-211ENST00000572883 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
SRRM2-211ENST00000572883 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
SRRM2-211ENST00000572883 NACADO15069 1562 aa21.17■□□□□ 0.98
SRRM2-211ENST00000572883 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
SRRM2-211ENST00000572883 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
SRRM2-211ENST00000572883 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
SRRM2-211ENST00000572883 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
SRRM2-211ENST00000572883 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
SRRM2-211ENST00000572883 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
SRRM2-211ENST00000572883 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SRRM2-211ENST00000572883 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
SRRM2-211ENST00000572883 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
SRRM2-211ENST00000572883 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
SRRM2-211ENST00000572883 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
SRRM2-211ENST00000572883 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
SRRM2-211ENST00000572883 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
SRRM2-211ENST00000572883 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
SRRM2-211ENST00000572883 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
SRRM2-211ENST00000572883 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
SRRM2-211ENST00000572883 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
SRRM2-211ENST00000572883 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
SRRM2-211ENST00000572883 WIZO95785 1651 aa19.44■□□□□ 0.7
SRRM2-211ENST00000572883 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
SRRM2-211ENST00000572883 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
SRRM2-211ENST00000572883 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
SRRM2-211ENST00000572883 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
SRRM2-211ENST00000572883 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
SRRM2-211ENST00000572883 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
SRRM2-211ENST00000572883 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
SRRM2-211ENST00000572883 CFTRP13569 1480 aa18.96■□□□□ 0.63
SRRM2-211ENST00000572883 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
SRRM2-211ENST00000572883 NESP48681 1621 aa18.94■□□□□ 0.62
SRRM2-211ENST00000572883 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
SRRM2-211ENST00000572883 FANCD2Q9BXW9 1451 aa18.74■□□□□ 0.59
SRRM2-211ENST00000572883 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
SRRM2-211ENST00000572883 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
SRRM2-211ENST00000572883 CEP164Q9UPV0 1460 aa18.66■□□□□ 0.58
SRRM2-211ENST00000572883 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
SRRM2-211ENST00000572883 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
SRRM2-211ENST00000572883 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
SRRM2-211ENST00000572883 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
SRRM2-211ENST00000572883 WDR62O43379 1518 aa18.53■□□□□ 0.56
SRRM2-211ENST00000572883 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
SRRM2-211ENST00000572883 TOPBP1Q92547 1522 aa18.48■□□□□ 0.55
SRRM2-211ENST00000572883 CUX2O14529 1486 aa18.47■□□□□ 0.55
SRRM2-211ENST00000572883 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
SRRM2-211ENST00000572883 CUX1P39880 1505 aa18.44■□□□□ 0.54
SRRM2-211ENST00000572883 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
SRRM2-211ENST00000572883 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
SRRM2-211ENST00000572883 POLA1P09884 1462 aaPredicted RBP18.34■□□□□ 0.53
SRRM2-211ENST00000572883 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
SRRM2-211ENST00000572883 BIVM-ERCC5R4GMW8 1640 aa18.32■□□□□ 0.52
SRRM2-211ENST00000572883 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
SRRM2-211ENST00000572883 SOGA1O94964 1423 aa18.3■□□□□ 0.52
SRRM2-211ENST00000572883 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
SRRM2-211ENST00000572883 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
SRRM2-211ENST00000572883 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
SRRM2-211ENST00000572883 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
SRRM2-211ENST00000572883 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
SRRM2-211ENST00000572883 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
SRRM2-211ENST00000572883 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
SRRM2-211ENST00000572883 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
SRRM2-211ENST00000572883 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.491e-17■■■□□ 17
SRRM2-211ENST00000572883 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
SRRM2-211ENST00000572883 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
SRRM2-211ENST00000572883 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
SRRM2-211ENST00000572883 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
SRRM2-211ENST00000572883 KIF27Q86VH2 1401 aa18.04■□□□□ 0.48
SRRM2-211ENST00000572883 GRIN2BQ13224 1484 aa18.02■□□□□ 0.48
SRRM2-211ENST00000572883 IGF1RP08069 1367 aa18.01■□□□□ 0.47
SRRM2-211ENST00000572883 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
SRRM2-211ENST00000572883 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
SRRM2-211ENST00000572883 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
SRRM2-211ENST00000572883 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
SRRM2-211ENST00000572883 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
SRRM2-211ENST00000572883 EEA1Q15075 1411 aa17.89■□□□□ 0.46
SRRM2-211ENST00000572883 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
SRRM2-211ENST00000572883 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
SRRM2-211ENST00000572883 SYNJ2O15056 1496 aa17.87■□□□□ 0.45
SRRM2-211ENST00000572883 CARMIL1Q5VZK9 1371 aa17.86■□□□□ 0.45
SRRM2-211ENST00000572883 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
SRRM2-211ENST00000572883 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
SRRM2-211ENST00000572883 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
SRRM2-211ENST00000572883 FBLN2P98095 1184 aa17.81■□□□□ 0.44
SRRM2-211ENST00000572883 PRXQ9BXM0 1461 aa17.81■□□□□ 0.44
SRRM2-211ENST00000572883 CUL7Q14999 1698 aa17.8■□□□□ 0.44
SRRM2-211ENST00000572883 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
SRRM2-211ENST00000572883 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
SRRM2-211ENST00000572883 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
SRRM2-211ENST00000572883 CHD1O14646 1710 aa17.75■□□□□ 0.43
SRRM2-211ENST00000572883 NUP160Q12769 1436 aa17.73■□□□□ 0.43
SRRM2-211ENST00000572883 CEP170Q5SW79 1584 aa17.66■□□□□ 0.42
SRRM2-211ENST00000572883 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
SRRM2-211ENST00000572883 KIF21BO75037 1637 aa17.64■□□□□ 0.41
SRRM2-211ENST00000572883 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms