RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 NISCHQ9Y2I1 1504 aa33.16■■■□□ 2.9
ACTN4-203ENST00000424234 CCDC180Q9P1Z9 1646 aa29.41■■■□□ 2.3
ACTN4-203ENST00000424234 ABCC9O60706 1549 aa28.09■■■□□ 2.09
ACTN4-203ENST00000424234 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
ACTN4-203ENST00000424234 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
ACTN4-203ENST00000424234 NACADO15069 1562 aa27.4■■□□□ 1.98
ACTN4-203ENST00000424234 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
ACTN4-203ENST00000424234 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
ACTN4-203ENST00000424234 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.96
ACTN4-203ENST00000424234 UNC13AQ9UPW8 1703 aa26.97■■□□□ 1.91
ACTN4-203ENST00000424234 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
ACTN4-203ENST00000424234 BICRAQ9NZM4 1560 aa26.52■■□□□ 1.84
ACTN4-203ENST00000424234 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
ACTN4-203ENST00000424234 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
ACTN4-203ENST00000424234 CECR2Q9BXF3 1484 aa25.75■■□□□ 1.71
ACTN4-203ENST00000424234 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
ACTN4-203ENST00000424234 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
ACTN4-203ENST00000424234 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
ACTN4-203ENST00000424234 MROH2BQ7Z745 1585 aa25.58■■□□□ 1.69
ACTN4-203ENST00000424234 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
ACTN4-203ENST00000424234 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
ACTN4-203ENST00000424234 WIZO95785 1651 aa25.42■■□□□ 1.66
ACTN4-203ENST00000424234 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
ACTN4-203ENST00000424234 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
ACTN4-203ENST00000424234 ATAD2BQ9ULI0 1458 aa25.32■■□□□ 1.64
ACTN4-203ENST00000424234 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
ACTN4-203ENST00000424234 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
ACTN4-203ENST00000424234 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
ACTN4-203ENST00000424234 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
ACTN4-203ENST00000424234 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
ACTN4-203ENST00000424234 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
ACTN4-203ENST00000424234 CCDC88BA6NC98 1476 aa24.74■■□□□ 1.55
ACTN4-203ENST00000424234 PRDM2Q13029 1718 aa24.67■■□□□ 1.54
ACTN4-203ENST00000424234 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
ACTN4-203ENST00000424234 NESP48681 1621 aa24.5■■□□□ 1.51
ACTN4-203ENST00000424234 CFTRP13569 1480 aa24.48■■□□□ 1.51
ACTN4-203ENST00000424234 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
ACTN4-203ENST00000424234 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
ACTN4-203ENST00000424234 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
ACTN4-203ENST00000424234 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
ACTN4-203ENST00000424234 CEP164Q9UPV0 1460 aa24.18■■□□□ 1.46
ACTN4-203ENST00000424234 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
ACTN4-203ENST00000424234 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
ACTN4-203ENST00000424234 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
ACTN4-203ENST00000424234 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
ACTN4-203ENST00000424234 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
ACTN4-203ENST00000424234 DNMBPQ6XZF7 1577 aa24■■□□□ 1.43
ACTN4-203ENST00000424234 BIVM-ERCC5R4GMW8 1640 aa24■■□□□ 1.43
ACTN4-203ENST00000424234 WDR62O43379 1518 aa24■■□□□ 1.43
ACTN4-203ENST00000424234 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
ACTN4-203ENST00000424234 CUX1P39880 1505 aa23.99■■□□□ 1.43
ACTN4-203ENST00000424234 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
ACTN4-203ENST00000424234 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
ACTN4-203ENST00000424234 TOPBP1Q92547 1522 aa23.95■■□□□ 1.42
ACTN4-203ENST00000424234 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
ACTN4-203ENST00000424234 POLA1P09884 1462 aaPredicted RBP23.77■■□□□ 1.4
ACTN4-203ENST00000424234 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
ACTN4-203ENST00000424234 CUX2O14529 1486 aa23.74■■□□□ 1.39
ACTN4-203ENST00000424234 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
ACTN4-203ENST00000424234 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
ACTN4-203ENST00000424234 RAD54L2Q9Y4B4 1467 aa23.63■■□□□ 1.37
ACTN4-203ENST00000424234 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
ACTN4-203ENST00000424234 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
ACTN4-203ENST00000424234 SOGA1O94964 1423 aa23.58■■□□□ 1.37
ACTN4-203ENST00000424234 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.37
ACTN4-203ENST00000424234 EIF4G3O43432 1585 aaKnown RBP23.55■■□□□ 1.36
ACTN4-203ENST00000424234 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
ACTN4-203ENST00000424234 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
ACTN4-203ENST00000424234 ZNF608Q9ULD9 1512 aaPredicted RBP23.5■■□□□ 1.35
ACTN4-203ENST00000424234 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
ACTN4-203ENST00000424234 AQRO60306 1485 aaKnown RBP eCLIP23.38■■□□□ 1.336e-8■■■■■ 42.5
ACTN4-203ENST00000424234 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
ACTN4-203ENST00000424234 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
ACTN4-203ENST00000424234 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
ACTN4-203ENST00000424234 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
ACTN4-203ENST00000424234 CUL7Q14999 1698 aa23.3■■□□□ 1.32
ACTN4-203ENST00000424234 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
ACTN4-203ENST00000424234 EEA1Q15075 1411 aa23.29■■□□□ 1.32
ACTN4-203ENST00000424234 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
ACTN4-203ENST00000424234 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
ACTN4-203ENST00000424234 CHD1O14646 1710 aa23.23■■□□□ 1.31
ACTN4-203ENST00000424234 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
ACTN4-203ENST00000424234 IGF1RP08069 1367 aa23.17■■□□□ 1.3
ACTN4-203ENST00000424234 KIF21BO75037 1637 aa23.15■■□□□ 1.3
ACTN4-203ENST00000424234 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
ACTN4-203ENST00000424234 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
ACTN4-203ENST00000424234 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
ACTN4-203ENST00000424234 PRXQ9BXM0 1461 aa23.1■■□□□ 1.29
ACTN4-203ENST00000424234 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
ACTN4-203ENST00000424234 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
ACTN4-203ENST00000424234 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
ACTN4-203ENST00000424234 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
ACTN4-203ENST00000424234 RAPGEF2Q9Y4G8 1499 aa23.04■■□□□ 1.28
ACTN4-203ENST00000424234 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
ACTN4-203ENST00000424234 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
ACTN4-203ENST00000424234 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
ACTN4-203ENST00000424234 NUP160Q12769 1436 aa22.9■■□□□ 1.26
ACTN4-203ENST00000424234 FBLN2P98095 1184 aa22.89■■□□□ 1.26
ACTN4-203ENST00000424234 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
ACTN4-203ENST00000424234 IQGAP2Q13576 1575 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms