RNA–Protein interactions for RNA: ENST00000528311.5

SCP2-213, Transcript of sterol carrier protein 2, humanhuman

TSL 2 BASIC

Gene SCP2, Length 1,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-213ENST00000528311 NISCHQ9Y2I1 1504 aa37.23■■■■□ 3.55
SCP2-213ENST00000528311 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
SCP2-213ENST00000528311 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
SCP2-213ENST00000528311 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
SCP2-213ENST00000528311 DCAF1Q9Y4B6 1507 aa30.77■■■□□ 2.52
SCP2-213ENST00000528311 ABCC9O60706 1549 aa30.74■■■□□ 2.51
SCP2-213ENST00000528311 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
SCP2-213ENST00000528311 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
SCP2-213ENST00000528311 NACADO15069 1562 aa30.24■■■□□ 2.43
SCP2-213ENST00000528311 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
SCP2-213ENST00000528311 SCRIBQ14160 1630 aa29.81■■■□□ 2.36
SCP2-213ENST00000528311 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
SCP2-213ENST00000528311 SUPT5HO00267 1087 aaKnown RBP29.3■■■□□ 2.28
SCP2-213ENST00000528311 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
SCP2-213ENST00000528311 PABPN1Q86U42 306 aaKnown RBP eCLIP29.06■■■□□ 2.24
SCP2-213ENST00000528311 CECR2Q9BXF3 1484 aa28.94■■■□□ 2.22
SCP2-213ENST00000528311 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
SCP2-213ENST00000528311 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
SCP2-213ENST00000528311 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
SCP2-213ENST00000528311 SMARCA4P51532 1647 aa28.59■■■□□ 2.17
SCP2-213ENST00000528311 WIZO95785 1651 aa28.51■■■□□ 2.15
SCP2-213ENST00000528311 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
SCP2-213ENST00000528311 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.11
SCP2-213ENST00000528311 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
SCP2-213ENST00000528311 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
SCP2-213ENST00000528311 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
SCP2-213ENST00000528311 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
SCP2-213ENST00000528311 BAZ1BQ9UIG0 1483 aaKnown RBP27.99■■■□□ 2.07
SCP2-213ENST00000528311 CCDC88BA6NC98 1476 aa27.97■■■□□ 2.07
SCP2-213ENST00000528311 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
SCP2-213ENST00000528311 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
SCP2-213ENST00000528311 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
SCP2-213ENST00000528311 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
SCP2-213ENST00000528311 TRIM41Q8WV44 630 aa27.56■■■□□ 2
SCP2-213ENST00000528311 ABCC8Q09428 1581 aa27.33■■□□□ 1.96
SCP2-213ENST00000528311 CFTRP13569 1480 aa27.31■■□□□ 1.96
SCP2-213ENST00000528311 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
SCP2-213ENST00000528311 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.94
SCP2-213ENST00000528311 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
SCP2-213ENST00000528311 FAM9AQ8IZU1 332 aaPredicted RBP27.03■■□□□ 1.92
SCP2-213ENST00000528311 SYNJ1O43426 1573 aa27.02■■□□□ 1.92
SCP2-213ENST00000528311 LOC105371045A0A1W2PR82 267 aa26.99■■□□□ 1.91
SCP2-213ENST00000528311 NESP48681 1621 aa26.98■■□□□ 1.91
SCP2-213ENST00000528311 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
SCP2-213ENST00000528311 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
SCP2-213ENST00000528311 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
SCP2-213ENST00000528311 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
SCP2-213ENST00000528311 CUX1P39880 1505 aa26.87■■□□□ 1.89
SCP2-213ENST00000528311 SOGA1O94964 1423 aa26.86■■□□□ 1.89
SCP2-213ENST00000528311 PDS5BQ9NTI5 1447 aa26.81■■□□□ 1.88
SCP2-213ENST00000528311 EEA1Q15075 1411 aa26.79■■□□□ 1.88
SCP2-213ENST00000528311 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
SCP2-213ENST00000528311 CSRNP3Q8WYN3 585 aa26.74■■□□□ 1.87
SCP2-213ENST00000528311 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
SCP2-213ENST00000528311 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
SCP2-213ENST00000528311 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
SCP2-213ENST00000528311 KIF21AQ7Z4S6 1674 aa26.61■■□□□ 1.85
SCP2-213ENST00000528311 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
SCP2-213ENST00000528311 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
SCP2-213ENST00000528311 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
SCP2-213ENST00000528311 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
SCP2-213ENST00000528311 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
SCP2-213ENST00000528311 CUX2O14529 1486 aa26.43■■□□□ 1.82
SCP2-213ENST00000528311 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
SCP2-213ENST00000528311 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
SCP2-213ENST00000528311 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
SCP2-213ENST00000528311 GOLGA3Q08378 1498 aa26.39■■□□□ 1.82
SCP2-213ENST00000528311 KIF21BO75037 1637 aa26.38■■□□□ 1.81
SCP2-213ENST00000528311 ERCC6Q03468 1493 aa26.37■■□□□ 1.81
SCP2-213ENST00000528311 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
SCP2-213ENST00000528311 TNIKQ9UKE5 1360 aa26.36■■□□□ 1.81
SCP2-213ENST00000528311 IGF1RP08069 1367 aa26.33■■□□□ 1.81
SCP2-213ENST00000528311 PRXQ9BXM0 1461 aa26.32■■□□□ 1.8
SCP2-213ENST00000528311 RAPGEF2Q9Y4G8 1499 aa26.29■■□□□ 1.8
SCP2-213ENST00000528311 PCGF6Q9BYE7 350 aa26.28■■□□□ 1.8
SCP2-213ENST00000528311 WDR62O43379 1518 aa26.25■■□□□ 1.79
SCP2-213ENST00000528311 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
SCP2-213ENST00000528311 WDR97A6NE52 1622 aa26.2■■□□□ 1.79
SCP2-213ENST00000528311 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
SCP2-213ENST00000528311 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
SCP2-213ENST00000528311 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
SCP2-213ENST00000528311 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
SCP2-213ENST00000528311 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
SCP2-213ENST00000528311 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
SCP2-213ENST00000528311 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
SCP2-213ENST00000528311 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
SCP2-213ENST00000528311 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
SCP2-213ENST00000528311 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.76
SCP2-213ENST00000528311 CUL7Q14999 1698 aa26.02■■□□□ 1.76
SCP2-213ENST00000528311 CLIP1P30622 1438 aa26■■□□□ 1.75
SCP2-213ENST00000528311 ZNF608Q9ULD9 1512 aaPredicted RBP25.96■■□□□ 1.75
SCP2-213ENST00000528311 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
SCP2-213ENST00000528311 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
SCP2-213ENST00000528311 PBRM1Q86U86 1689 aa25.9■■□□□ 1.74
SCP2-213ENST00000528311 HRCP23327 699 aa25.9■■□□□ 1.74
SCP2-213ENST00000528311 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
SCP2-213ENST00000528311 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
SCP2-213ENST00000528311 VPS8Q8N3P4 1428 aa25.75■■□□□ 1.71
SCP2-213ENST00000528311 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
SCP2-213ENST00000528311 ARHGAP35Q9NRY4 1499 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms