RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
UBE2N-203ENST00000549490 ABCC9O60706 1549 aa21.29■■□□□ 1
UBE2N-203ENST00000549490 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
UBE2N-203ENST00000549490 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
UBE2N-203ENST00000549490 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
UBE2N-203ENST00000549490 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
UBE2N-203ENST00000549490 NACADO15069 1562 aa19.76■□□□□ 0.75
UBE2N-203ENST00000549490 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
UBE2N-203ENST00000549490 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
UBE2N-203ENST00000549490 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
UBE2N-203ENST00000549490 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
UBE2N-203ENST00000549490 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
UBE2N-203ENST00000549490 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
UBE2N-203ENST00000549490 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
UBE2N-203ENST00000549490 SHROOM4Q9ULL8 1493 aa19.12■□□□□ 0.65
UBE2N-203ENST00000549490 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
UBE2N-203ENST00000549490 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
UBE2N-203ENST00000549490 DCAF1Q9Y4B6 1507 aa18.92■□□□□ 0.62
UBE2N-203ENST00000549490 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
UBE2N-203ENST00000549490 CUX2O14529 1486 aa18.52■□□□□ 0.55
UBE2N-203ENST00000549490 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
UBE2N-203ENST00000549490 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
UBE2N-203ENST00000549490 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
UBE2N-203ENST00000549490 NESP48681 1621 aa18.16■□□□□ 0.5
UBE2N-203ENST00000549490 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
UBE2N-203ENST00000549490 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
UBE2N-203ENST00000549490 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
UBE2N-203ENST00000549490 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
UBE2N-203ENST00000549490 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
UBE2N-203ENST00000549490 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
UBE2N-203ENST00000549490 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
UBE2N-203ENST00000549490 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
UBE2N-203ENST00000549490 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
UBE2N-203ENST00000549490 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
UBE2N-203ENST00000549490 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
UBE2N-203ENST00000549490 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
UBE2N-203ENST00000549490 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
UBE2N-203ENST00000549490 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
UBE2N-203ENST00000549490 WDR62O43379 1518 aa17.67■□□□□ 0.42
UBE2N-203ENST00000549490 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
UBE2N-203ENST00000549490 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
UBE2N-203ENST00000549490 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
UBE2N-203ENST00000549490 CFTRP13569 1480 aa17.42■□□□□ 0.38
UBE2N-203ENST00000549490 WIZO95785 1651 aa17.42■□□□□ 0.38
UBE2N-203ENST00000549490 URB2Q14146 1524 aaKnown RBP17.4■□□□□ 0.38
UBE2N-203ENST00000549490 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
UBE2N-203ENST00000549490 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
UBE2N-203ENST00000549490 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
UBE2N-203ENST00000549490 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
UBE2N-203ENST00000549490 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
UBE2N-203ENST00000549490 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.36
UBE2N-203ENST00000549490 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
UBE2N-203ENST00000549490 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
UBE2N-203ENST00000549490 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
UBE2N-203ENST00000549490 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
UBE2N-203ENST00000549490 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
UBE2N-203ENST00000549490 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
UBE2N-203ENST00000549490 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
UBE2N-203ENST00000549490 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBE2N-203ENST00000549490 FBLN2P98095 1184 aa17.07■□□□□ 0.32
UBE2N-203ENST00000549490 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
UBE2N-203ENST00000549490 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
UBE2N-203ENST00000549490 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
UBE2N-203ENST00000549490 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
UBE2N-203ENST00000549490 CHD1O14646 1710 aa16.99■□□□□ 0.31
UBE2N-203ENST00000549490 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
UBE2N-203ENST00000549490 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
UBE2N-203ENST00000549490 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
UBE2N-203ENST00000549490 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
UBE2N-203ENST00000549490 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
UBE2N-203ENST00000549490 SOGA1O94964 1423 aa16.87■□□□□ 0.29
UBE2N-203ENST00000549490 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
UBE2N-203ENST00000549490 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
UBE2N-203ENST00000549490 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
UBE2N-203ENST00000549490 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
UBE2N-203ENST00000549490 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.28
UBE2N-203ENST00000549490 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
UBE2N-203ENST00000549490 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
UBE2N-203ENST00000549490 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
UBE2N-203ENST00000549490 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
UBE2N-203ENST00000549490 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
UBE2N-203ENST00000549490 CUX1P39880 1505 aa16.65■□□□□ 0.26
UBE2N-203ENST00000549490 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
UBE2N-203ENST00000549490 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
UBE2N-203ENST00000549490 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
UBE2N-203ENST00000549490 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
UBE2N-203ENST00000549490 NUP160Q12769 1436 aa16.5■□□□□ 0.23
UBE2N-203ENST00000549490 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
UBE2N-203ENST00000549490 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
UBE2N-203ENST00000549490 FAM69CQ0P6D2 419 aa16.43■□□□□ 0.22
UBE2N-203ENST00000549490 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
UBE2N-203ENST00000549490 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
UBE2N-203ENST00000549490 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
UBE2N-203ENST00000549490 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
UBE2N-203ENST00000549490 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
UBE2N-203ENST00000549490 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
UBE2N-203ENST00000549490 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
UBE2N-203ENST00000549490 PRG4Q92954 1404 aaPredicted RBP16.39■□□□□ 0.21
UBE2N-203ENST00000549490 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
UBE2N-203ENST00000549490 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms