RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 AEBP2Q6ZN18 517 aaPredicted RBP26.65■■□□□ 1.86
UBE2N-206ENST00000552442 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
UBE2N-206ENST00000552442 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
UBE2N-206ENST00000552442 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
UBE2N-206ENST00000552442 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
UBE2N-206ENST00000552442 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
UBE2N-206ENST00000552442 FOXD1Q16676 465 aa21■□□□□ 0.95
UBE2N-206ENST00000552442 ADRA2BP18089 450 aa20.19■□□□□ 0.82
UBE2N-206ENST00000552442 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
UBE2N-206ENST00000552442 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
UBE2N-206ENST00000552442 PIAS4Q8N2W9 510 aaPredicted RBP19.87■□□□□ 0.77
UBE2N-206ENST00000552442 ABCC9O60706 1549 aa19.54■□□□□ 0.72
UBE2N-206ENST00000552442 MSH5O43196 834 aa19.45■□□□□ 0.7
UBE2N-206ENST00000552442 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
UBE2N-206ENST00000552442 NACADO15069 1562 aa18.7■□□□□ 0.58
UBE2N-206ENST00000552442 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
UBE2N-206ENST00000552442 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
UBE2N-206ENST00000552442 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
UBE2N-206ENST00000552442 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.56
UBE2N-206ENST00000552442 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
UBE2N-206ENST00000552442 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
UBE2N-206ENST00000552442 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
UBE2N-206ENST00000552442 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
UBE2N-206ENST00000552442 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
UBE2N-206ENST00000552442 KCNA4P22459 653 aa18.25■□□□□ 0.51
UBE2N-206ENST00000552442 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
UBE2N-206ENST00000552442 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
UBE2N-206ENST00000552442 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
UBE2N-206ENST00000552442 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
UBE2N-206ENST00000552442 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
UBE2N-206ENST00000552442 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
UBE2N-206ENST00000552442 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
UBE2N-206ENST00000552442 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
UBE2N-206ENST00000552442 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
UBE2N-206ENST00000552442 HOXD11P31277 338 aaPredicted RBP17.74■□□□□ 0.43
UBE2N-206ENST00000552442 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
UBE2N-206ENST00000552442 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
UBE2N-206ENST00000552442 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
UBE2N-206ENST00000552442 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
UBE2N-206ENST00000552442 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
UBE2N-206ENST00000552442 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
UBE2N-206ENST00000552442 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
UBE2N-206ENST00000552442 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.35
UBE2N-206ENST00000552442 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
UBE2N-206ENST00000552442 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
UBE2N-206ENST00000552442 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
UBE2N-206ENST00000552442 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
UBE2N-206ENST00000552442 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
UBE2N-206ENST00000552442 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
UBE2N-206ENST00000552442 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
UBE2N-206ENST00000552442 WIZO95785 1651 aa16.99■□□□□ 0.31
UBE2N-206ENST00000552442 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
UBE2N-206ENST00000552442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
UBE2N-206ENST00000552442 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
UBE2N-206ENST00000552442 NESP48681 1621 aa16.86■□□□□ 0.29
UBE2N-206ENST00000552442 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
UBE2N-206ENST00000552442 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
UBE2N-206ENST00000552442 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
UBE2N-206ENST00000552442 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
UBE2N-206ENST00000552442 TOP2AP11388 1531 aaKnown RBP16.78■□□□□ 0.28
UBE2N-206ENST00000552442 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
UBE2N-206ENST00000552442 ZBTB22O15209 634 aa16.76■□□□□ 0.27
UBE2N-206ENST00000552442 CUX2O14529 1486 aa16.73■□□□□ 0.27
UBE2N-206ENST00000552442 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
UBE2N-206ENST00000552442 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
UBE2N-206ENST00000552442 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
UBE2N-206ENST00000552442 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
UBE2N-206ENST00000552442 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
UBE2N-206ENST00000552442 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
UBE2N-206ENST00000552442 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
UBE2N-206ENST00000552442 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
UBE2N-206ENST00000552442 CFTRP13569 1480 aa16.58■□□□□ 0.24
UBE2N-206ENST00000552442 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
UBE2N-206ENST00000552442 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
UBE2N-206ENST00000552442 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
UBE2N-206ENST00000552442 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
UBE2N-206ENST00000552442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
UBE2N-206ENST00000552442 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
UBE2N-206ENST00000552442 WDR62O43379 1518 aa16.5■□□□□ 0.23
UBE2N-206ENST00000552442 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
UBE2N-206ENST00000552442 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
UBE2N-206ENST00000552442 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
UBE2N-206ENST00000552442 APLP2Q06481 763 aa16.37■□□□□ 0.21
UBE2N-206ENST00000552442 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
UBE2N-206ENST00000552442 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
UBE2N-206ENST00000552442 ATXN8OSP0DMR3 200 aa16.27■□□□□ 0.2
UBE2N-206ENST00000552442 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
UBE2N-206ENST00000552442 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
UBE2N-206ENST00000552442 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
UBE2N-206ENST00000552442 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
UBE2N-206ENST00000552442 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
UBE2N-206ENST00000552442 CAPN15O75808 1086 aa16.13■□□□□ 0.17
UBE2N-206ENST00000552442 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
UBE2N-206ENST00000552442 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
UBE2N-206ENST00000552442 ZNF608Q9ULD9 1512 aaPredicted RBP16.12■□□□□ 0.17
UBE2N-206ENST00000552442 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
UBE2N-206ENST00000552442 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
UBE2N-206ENST00000552442 CUX1P39880 1505 aa16.09■□□□□ 0.17
UBE2N-206ENST00000552442 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
UBE2N-206ENST00000552442 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms