RNA–Protein interactions for RNA: ENST00000450298.5

SLC13A3-207, Transcript of solute carrier family 13 member 3, humanhuman

TSL 3

Gene SLC13A3, Length 707 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-207ENST00000450298 NISCHQ9Y2I1 1504 aa15.11■□□□□ 0.01
SLC13A3-207ENST00000450298 ABCC9O60706 1549 aa14.05□□□□□ -0.16
SLC13A3-207ENST00000450298 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
SLC13A3-207ENST00000450298 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
SLC13A3-207ENST00000450298 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
SLC13A3-207ENST00000450298 NACADO15069 1562 aa13.09□□□□□ -0.31
SLC13A3-207ENST00000450298 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
SLC13A3-207ENST00000450298 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
SLC13A3-207ENST00000450298 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
SLC13A3-207ENST00000450298 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
SLC13A3-207ENST00000450298 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
SLC13A3-207ENST00000450298 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
SLC13A3-207ENST00000450298 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
SLC13A3-207ENST00000450298 SHROOM4Q9ULL8 1493 aa12.67□□□□□ -0.38
SLC13A3-207ENST00000450298 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
SLC13A3-207ENST00000450298 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
SLC13A3-207ENST00000450298 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
SLC13A3-207ENST00000450298 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
SLC13A3-207ENST00000450298 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
SLC13A3-207ENST00000450298 CUX2O14529 1486 aa12.27□□□□□ -0.44
SLC13A3-207ENST00000450298 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
SLC13A3-207ENST00000450298 NCAPD3P42695 1498 aa12.02□□□□□ -0.48
SLC13A3-207ENST00000450298 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
SLC13A3-207ENST00000450298 NESP48681 1621 aa11.96□□□□□ -0.5
SLC13A3-207ENST00000450298 HMGXB3Q12766 1538 aa11.96□□□□□ -0.5
SLC13A3-207ENST00000450298 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
SLC13A3-207ENST00000450298 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
SLC13A3-207ENST00000450298 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
SLC13A3-207ENST00000450298 KIF21AQ7Z4S6 1674 aa11.93□□□□□ -0.5
SLC13A3-207ENST00000450298 SMARCA4P51532 1647 aa11.91□□□□□ -0.5
SLC13A3-207ENST00000450298 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
SLC13A3-207ENST00000450298 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
SLC13A3-207ENST00000450298 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
SLC13A3-207ENST00000450298 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
SLC13A3-207ENST00000450298 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.53
SLC13A3-207ENST00000450298 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
SLC13A3-207ENST00000450298 WDR62O43379 1518 aa11.7□□□□□ -0.54
SLC13A3-207ENST00000450298 CADPSQ9ULU8 1353 aa11.64□□□□□ -0.55
SLC13A3-207ENST00000450298 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
SLC13A3-207ENST00000450298 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
SLC13A3-207ENST00000450298 CEP164Q9UPV0 1460 aa11.6□□□□□ -0.55
SLC13A3-207ENST00000450298 RIMBP3CA6NJZ7 1639 aa11.59□□□□□ -0.55
SLC13A3-207ENST00000450298 RIMBP3BA6NNM3 1639 aa11.59□□□□□ -0.55
SLC13A3-207ENST00000450298 RIMBP3Q9UFD9 1639 aa11.59□□□□□ -0.55
SLC13A3-207ENST00000450298 WIZO95785 1651 aa11.54□□□□□ -0.56
SLC13A3-207ENST00000450298 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
SLC13A3-207ENST00000450298 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
SLC13A3-207ENST00000450298 ARHGEF11O15085 1522 aa11.46□□□□□ -0.57
SLC13A3-207ENST00000450298 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
SLC13A3-207ENST00000450298 CFTRP13569 1480 aa11.44□□□□□ -0.58
SLC13A3-207ENST00000450298 CHD1O14646 1710 aa11.41□□□□□ -0.58
SLC13A3-207ENST00000450298 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.58
SLC13A3-207ENST00000450298 CYB5RLQ6IPT4 315 aa11.37□□□□□ -0.59
SLC13A3-207ENST00000450298 IFT140Q96RY7 1462 aa11.37□□□□□ -0.59
SLC13A3-207ENST00000450298 EIF4G3O43432 1585 aaKnown RBP11.36□□□□□ -0.59
SLC13A3-207ENST00000450298 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
SLC13A3-207ENST00000450298 AEBP2Q6ZN18 517 aaPredicted RBP11.35□□□□□ -0.59
SLC13A3-207ENST00000450298 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
SLC13A3-207ENST00000450298 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
SLC13A3-207ENST00000450298 RSF1Q96T23 1441 aaPredicted RBP11.29□□□□□ -0.6
SLC13A3-207ENST00000450298 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
SLC13A3-207ENST00000450298 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
SLC13A3-207ENST00000450298 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
SLC13A3-207ENST00000450298 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
SLC13A3-207ENST00000450298 FBLN2P98095 1184 aa11.23□□□□□ -0.61
SLC13A3-207ENST00000450298 AQRO60306 1485 aaKnown RBP eCLIP11.2□□□□□ -0.62
SLC13A3-207ENST00000450298 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
SLC13A3-207ENST00000450298 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
SLC13A3-207ENST00000450298 CLASP1Q7Z460 1538 aa11.16□□□□□ -0.62
SLC13A3-207ENST00000450298 WDR97A6NE52 1622 aa11.14□□□□□ -0.63
SLC13A3-207ENST00000450298 POLA1P09884 1462 aaPredicted RBP11.13□□□□□ -0.63
SLC13A3-207ENST00000450298 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
SLC13A3-207ENST00000450298 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
SLC13A3-207ENST00000450298 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
SLC13A3-207ENST00000450298 MAGI1Q96QZ7 1491 aaPredicted RBP11.08□□□□□ -0.64
SLC13A3-207ENST00000450298 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
SLC13A3-207ENST00000450298 CHMP7Q8WUX9 453 aaPredicted RBP11.08□□□□□ -0.64
SLC13A3-207ENST00000450298 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
SLC13A3-207ENST00000450298 SOGA1O94964 1423 aa11.07□□□□□ -0.64
SLC13A3-207ENST00000450298 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
SLC13A3-207ENST00000450298 SYNJ2O15056 1496 aa11.04□□□□□ -0.64
SLC13A3-207ENST00000450298 KIF13AQ9H1H9 1805 aa11.04□□□□□ -0.64
SLC13A3-207ENST00000450298 GRIN2BQ13224 1484 aa11.03□□□□□ -0.64
SLC13A3-207ENST00000450298 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
SLC13A3-207ENST00000450298 CUX1P39880 1505 aa10.95□□□□□ -0.66
SLC13A3-207ENST00000450298 ERCC6L2Q5T890 1561 aa10.94□□□□□ -0.66
SLC13A3-207ENST00000450298 ABCA5Q8WWZ7 1642 aa10.94□□□□□ -0.66
SLC13A3-207ENST00000450298 CEP170Q5SW79 1584 aa10.92□□□□□ -0.66
SLC13A3-207ENST00000450298 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
SLC13A3-207ENST00000450298 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
SLC13A3-207ENST00000450298 ADAMTS12P58397 1594 aa10.88□□□□□ -0.67
SLC13A3-207ENST00000450298 TSPOAP1O95153 1857 aa10.87□□□□□ -0.67
SLC13A3-207ENST00000450298 ABCA10Q8WWZ4 1543 aa10.87□□□□□ -0.67
SLC13A3-207ENST00000450298 KDM6BO15054 1643 aa10.85□□□□□ -0.67
SLC13A3-207ENST00000450298 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
SLC13A3-207ENST00000450298 NUP160Q12769 1436 aa10.84□□□□□ -0.67
SLC13A3-207ENST00000450298 DIP2BQ9P265 1576 aa10.82□□□□□ -0.68
SLC13A3-207ENST00000450298 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
SLC13A3-207ENST00000450298 FAM69CQ0P6D2 419 aa10.8□□□□□ -0.68
SLC13A3-207ENST00000450298 ABCC10Q5T3U5 1492 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms