RNA–Protein interactions for RNA: ENST00000465486.6

NUP214-205, Transcript of nucleoporin 214, humanhuman

TSL 1 (best)

Gene NUP214, Length 1,068 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-205ENST00000465486 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
NUP214-205ENST00000465486 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
NUP214-205ENST00000465486 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
NUP214-205ENST00000465486 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
NUP214-205ENST00000465486 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
NUP214-205ENST00000465486 FOXD1Q16676 465 aa19.69■□□□□ 0.74
NUP214-205ENST00000465486 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
NUP214-205ENST00000465486 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
NUP214-205ENST00000465486 ADRA2BP18089 450 aa18.46■□□□□ 0.55
NUP214-205ENST00000465486 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
NUP214-205ENST00000465486 MSH5O43196 834 aa18.36■□□□□ 0.53
NUP214-205ENST00000465486 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
NUP214-205ENST00000465486 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
NUP214-205ENST00000465486 ABCC9O60706 1549 aa17.72■□□□□ 0.43
NUP214-205ENST00000465486 DCAF8L2P0C7V8 631 aa17.35■□□□□ 0.37
NUP214-205ENST00000465486 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
NUP214-205ENST00000465486 NACADO15069 1562 aa17.2■□□□□ 0.34
NUP214-205ENST00000465486 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
NUP214-205ENST00000465486 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
NUP214-205ENST00000465486 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
NUP214-205ENST00000465486 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
NUP214-205ENST00000465486 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
NUP214-205ENST00000465486 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
NUP214-205ENST00000465486 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
NUP214-205ENST00000465486 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
NUP214-205ENST00000465486 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
NUP214-205ENST00000465486 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
NUP214-205ENST00000465486 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
NUP214-205ENST00000465486 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
NUP214-205ENST00000465486 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
NUP214-205ENST00000465486 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
NUP214-205ENST00000465486 EIF4G1Q04637 1599 aaKnown RBP16.14■□□□□ 0.17
NUP214-205ENST00000465486 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
NUP214-205ENST00000465486 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
NUP214-205ENST00000465486 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
NUP214-205ENST00000465486 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
NUP214-205ENST00000465486 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
NUP214-205ENST00000465486 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
NUP214-205ENST00000465486 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
NUP214-205ENST00000465486 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
NUP214-205ENST00000465486 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.15
NUP214-205ENST00000465486 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
NUP214-205ENST00000465486 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
NUP214-205ENST00000465486 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
NUP214-205ENST00000465486 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
NUP214-205ENST00000465486 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
NUP214-205ENST00000465486 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
NUP214-205ENST00000465486 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
NUP214-205ENST00000465486 WIZO95785 1651 aa15.79■□□□□ 0.12
NUP214-205ENST00000465486 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
NUP214-205ENST00000465486 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
NUP214-205ENST00000465486 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
NUP214-205ENST00000465486 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
NUP214-205ENST00000465486 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
NUP214-205ENST00000465486 KCNA4P22459 653 aa15.62■□□□□ 0.09
NUP214-205ENST00000465486 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
NUP214-205ENST00000465486 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
NUP214-205ENST00000465486 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
NUP214-205ENST00000465486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.06
NUP214-205ENST00000465486 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
NUP214-205ENST00000465486 CFTRP13569 1480 aa15.38■□□□□ 0.05
NUP214-205ENST00000465486 NESP48681 1621 aa15.37■□□□□ 0.05
NUP214-205ENST00000465486 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
NUP214-205ENST00000465486 ERCC6Q03468 1493 aa15.29■□□□□ 0.04
NUP214-205ENST00000465486 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
NUP214-205ENST00000465486 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
NUP214-205ENST00000465486 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
NUP214-205ENST00000465486 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
NUP214-205ENST00000465486 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
NUP214-205ENST00000465486 MRC2Q9UBG0 1479 aa15.13■□□□□ 0.01
NUP214-205ENST00000465486 ABCC8Q09428 1581 aa15.1■□□□□ 0.01
NUP214-205ENST00000465486 SLC4A2P04920 1241 aa15.08■□□□□ 0
NUP214-205ENST00000465486 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
NUP214-205ENST00000465486 WDR62O43379 1518 aa15.04■□□□□ -0
NUP214-205ENST00000465486 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
NUP214-205ENST00000465486 CUX2O14529 1486 aa15.03■□□□□ -0
NUP214-205ENST00000465486 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
NUP214-205ENST00000465486 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
NUP214-205ENST00000465486 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
NUP214-205ENST00000465486 CUX1P39880 1505 aa14.96□□□□□ -0.02
NUP214-205ENST00000465486 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
NUP214-205ENST00000465486 SOGA1O94964 1423 aa14.9□□□□□ -0.02
NUP214-205ENST00000465486 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
NUP214-205ENST00000465486 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
NUP214-205ENST00000465486 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
NUP214-205ENST00000465486 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
NUP214-205ENST00000465486 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
NUP214-205ENST00000465486 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
NUP214-205ENST00000465486 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
NUP214-205ENST00000465486 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
NUP214-205ENST00000465486 CAPN15O75808 1086 aa14.83□□□□□ -0.04
NUP214-205ENST00000465486 TARBP1Q13395 1621 aaKnown RBP14.8□□□□□ -0.04
NUP214-205ENST00000465486 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
NUP214-205ENST00000465486 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
NUP214-205ENST00000465486 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
NUP214-205ENST00000465486 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
NUP214-205ENST00000465486 DSG3P32926 999 aa14.74□□□□□ -0.05
NUP214-205ENST00000465486 AQRO60306 1485 aaKnown RBP eCLIP14.74□□□□□ -0.056e-8■■■□□ 17.4
NUP214-205ENST00000465486 WDR97A6NE52 1622 aa14.73□□□□□ -0.05
NUP214-205ENST00000465486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms