RNA–Protein interactions for RNA: ENST00000528809.1

SCP2-214, Transcript of sterol carrier protein 2, humanhuman

TSL 5

Gene SCP2, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-214ENST00000528809 NISCHQ9Y2I1 1504 aa40.16■■■■■ 4.02
SCP2-214ENST00000528809 CCDC180Q9P1Z9 1646 aa35.49■■■■□ 3.27
SCP2-214ENST00000528809 ABCC9O60706 1549 aa33.93■■■■□ 3.02
SCP2-214ENST00000528809 ZCCHC6Q5VYS8 1495 aaKnown RBP33.61■■■□□ 2.97
SCP2-214ENST00000528809 DCAF1Q9Y4B6 1507 aa33.29■■■□□ 2.92
SCP2-214ENST00000528809 DCAF8L2P0C7V8 631 aa33.23■■■□□ 2.91
SCP2-214ENST00000528809 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
SCP2-214ENST00000528809 NACADO15069 1562 aa33.16■■■□□ 2.9
SCP2-214ENST00000528809 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
SCP2-214ENST00000528809 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
SCP2-214ENST00000528809 UNC13AQ9UPW8 1703 aa32.3■■■□□ 2.76
SCP2-214ENST00000528809 SHROOM4Q9ULL8 1493 aa32.11■■■□□ 2.73
SCP2-214ENST00000528809 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
SCP2-214ENST00000528809 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
SCP2-214ENST00000528809 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
SCP2-214ENST00000528809 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
SCP2-214ENST00000528809 EIF4G1Q04637 1599 aaKnown RBP31.06■■■□□ 2.56
SCP2-214ENST00000528809 SMARCA4P51532 1647 aa31.05■■■□□ 2.56
SCP2-214ENST00000528809 MROH2BQ7Z745 1585 aa30.93■■■□□ 2.54
SCP2-214ENST00000528809 RSF1Q96T23 1441 aaPredicted RBP30.82■■■□□ 2.52
SCP2-214ENST00000528809 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.52
SCP2-214ENST00000528809 PEG3Q9GZU2 1588 aa30.72■■■□□ 2.51
SCP2-214ENST00000528809 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
SCP2-214ENST00000528809 WIZO95785 1651 aa30.68■■■□□ 2.5
SCP2-214ENST00000528809 ATAD2BQ9ULI0 1458 aa30.64■■■□□ 2.5
SCP2-214ENST00000528809 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
SCP2-214ENST00000528809 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
SCP2-214ENST00000528809 HMGXB3Q12766 1538 aa30.5■■■□□ 2.47
SCP2-214ENST00000528809 BAZ1BQ9UIG0 1483 aaKnown RBP30.48■■■□□ 2.47
SCP2-214ENST00000528809 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
SCP2-214ENST00000528809 DNAJC5BQ9UF47 199 aa30.37■■■□□ 2.45
SCP2-214ENST00000528809 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
SCP2-214ENST00000528809 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
SCP2-214ENST00000528809 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
SCP2-214ENST00000528809 CFTRP13569 1480 aa29.65■■■□□ 2.34
SCP2-214ENST00000528809 PRDM2Q13029 1718 aa29.64■■■□□ 2.34
SCP2-214ENST00000528809 NESP48681 1621 aa29.55■■■□□ 2.32
SCP2-214ENST00000528809 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
SCP2-214ENST00000528809 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
SCP2-214ENST00000528809 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
SCP2-214ENST00000528809 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
SCP2-214ENST00000528809 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
SCP2-214ENST00000528809 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
SCP2-214ENST00000528809 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
SCP2-214ENST00000528809 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
SCP2-214ENST00000528809 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
SCP2-214ENST00000528809 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.24
SCP2-214ENST00000528809 CUX1P39880 1505 aa28.99■■■□□ 2.23
SCP2-214ENST00000528809 BIVM-ERCC5R4GMW8 1640 aa28.99■■■□□ 2.23
SCP2-214ENST00000528809 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
SCP2-214ENST00000528809 TOP2BQ02880 1626 aa28.98■■■□□ 2.23
SCP2-214ENST00000528809 SYNJ1O43426 1573 aa28.97■■■□□ 2.23
SCP2-214ENST00000528809 WDR62O43379 1518 aa28.96■■■□□ 2.23
SCP2-214ENST00000528809 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
SCP2-214ENST00000528809 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
SCP2-214ENST00000528809 TRIM41Q8WV44 630 aa28.88■■■□□ 2.21
SCP2-214ENST00000528809 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
SCP2-214ENST00000528809 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
SCP2-214ENST00000528809 CUX2O14529 1486 aa28.68■■■□□ 2.18
SCP2-214ENST00000528809 SOGA1O94964 1423 aa28.65■■■□□ 2.18
SCP2-214ENST00000528809 IFT140Q96RY7 1462 aa28.62■■■□□ 2.17
SCP2-214ENST00000528809 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
SCP2-214ENST00000528809 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
SCP2-214ENST00000528809 WDR97A6NE52 1622 aa28.58■■■□□ 2.17
SCP2-214ENST00000528809 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
SCP2-214ENST00000528809 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
SCP2-214ENST00000528809 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
SCP2-214ENST00000528809 EEA1Q15075 1411 aa28.41■■■□□ 2.14
SCP2-214ENST00000528809 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
SCP2-214ENST00000528809 ZNF608Q9ULD9 1512 aaPredicted RBP28.37■■■□□ 2.13
SCP2-214ENST00000528809 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
SCP2-214ENST00000528809 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
SCP2-214ENST00000528809 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
SCP2-214ENST00000528809 RUSC2Q8N2Y8 1516 aa28.32■■■□□ 2.12
SCP2-214ENST00000528809 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.12
SCP2-214ENST00000528809 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
SCP2-214ENST00000528809 GRIN2BQ13224 1484 aa28.26■■■□□ 2.11
SCP2-214ENST00000528809 FAM9AQ8IZU1 332 aaPredicted RBP28.23■■■□□ 2.11
SCP2-214ENST00000528809 CUL7Q14999 1698 aa28.19■■■□□ 2.1
SCP2-214ENST00000528809 CSRNP3Q8WYN3 585 aa28.18■■■□□ 2.1
SCP2-214ENST00000528809 IGF1RP08069 1367 aa28.17■■■□□ 2.1
SCP2-214ENST00000528809 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
SCP2-214ENST00000528809 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
SCP2-214ENST00000528809 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
SCP2-214ENST00000528809 CARMIL1Q5VZK9 1371 aa28.06■■■□□ 2.08
SCP2-214ENST00000528809 KIF21BO75037 1637 aa28.06■■■□□ 2.08
SCP2-214ENST00000528809 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
SCP2-214ENST00000528809 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
SCP2-214ENST00000528809 RAPGEF2Q9Y4G8 1499 aa28■■■□□ 2.07
SCP2-214ENST00000528809 SYNJ2O15056 1496 aa27.99■■■□□ 2.07
SCP2-214ENST00000528809 GOLGA3Q08378 1498 aa27.94■■■□□ 2.06
SCP2-214ENST00000528809 CHD1O14646 1710 aa27.91■■■□□ 2.06
SCP2-214ENST00000528809 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
SCP2-214ENST00000528809 GRIN2AQ12879 1464 aa27.89■■■□□ 2.05
SCP2-214ENST00000528809 FBLN2P98095 1184 aa27.85■■■□□ 2.05
SCP2-214ENST00000528809 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
SCP2-214ENST00000528809 EHMT2Q96KQ7 1210 aa27.78■■■□□ 2.04
SCP2-214ENST00000528809 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
SCP2-214ENST00000528809 NUP160Q12769 1436 aa27.72■■■□□ 2.03
SCP2-214ENST00000528809 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms