RNA–Protein interactions for RNA: ENST00000457029.3

FARP1-205, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-205ENST00000457029 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
FARP1-205ENST00000457029 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
FARP1-205ENST00000457029 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
FARP1-205ENST00000457029 ABCC9O60706 1549 aa18.7■□□□□ 0.58
FARP1-205ENST00000457029 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
FARP1-205ENST00000457029 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
FARP1-205ENST00000457029 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
FARP1-205ENST00000457029 CCDC180Q9P1Z9 1646 aa17.96■□□□□ 0.47
FARP1-205ENST00000457029 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
FARP1-205ENST00000457029 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
FARP1-205ENST00000457029 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
FARP1-205ENST00000457029 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
FARP1-205ENST00000457029 NACADO15069 1562 aa17.12■□□□□ 0.33
FARP1-205ENST00000457029 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
FARP1-205ENST00000457029 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
FARP1-205ENST00000457029 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
FARP1-205ENST00000457029 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
FARP1-205ENST00000457029 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
FARP1-205ENST00000457029 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
FARP1-205ENST00000457029 FOXD1Q16676 465 aa16.81■□□□□ 0.28
FARP1-205ENST00000457029 DCAF8L2P0C7V8 631 aa16.73■□□□□ 0.27
FARP1-205ENST00000457029 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
FARP1-205ENST00000457029 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
FARP1-205ENST00000457029 CUX2O14529 1486 aa16.56■□□□□ 0.24
FARP1-205ENST00000457029 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
FARP1-205ENST00000457029 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
FARP1-205ENST00000457029 SCRIBQ14160 1630 aa16.31■□□□□ 0.2
FARP1-205ENST00000457029 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
FARP1-205ENST00000457029 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
FARP1-205ENST00000457029 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
FARP1-205ENST00000457029 ADRA2BP18089 450 aa15.96■□□□□ 0.15
FARP1-205ENST00000457029 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
FARP1-205ENST00000457029 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
FARP1-205ENST00000457029 NESP48681 1621 aa15.79■□□□□ 0.12
FARP1-205ENST00000457029 PIAS4Q8N2W9 510 aaPredicted RBP15.79■□□□□ 0.12
FARP1-205ENST00000457029 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
FARP1-205ENST00000457029 SMARCA4P51532 1647 aa15.72■□□□□ 0.11
FARP1-205ENST00000457029 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
FARP1-205ENST00000457029 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
FARP1-205ENST00000457029 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
FARP1-205ENST00000457029 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
FARP1-205ENST00000457029 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
FARP1-205ENST00000457029 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
FARP1-205ENST00000457029 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
FARP1-205ENST00000457029 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
FARP1-205ENST00000457029 ATAD2BQ9ULI0 1458 aa15.61■□□□□ 0.09
FARP1-205ENST00000457029 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
FARP1-205ENST00000457029 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
FARP1-205ENST00000457029 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
FARP1-205ENST00000457029 MSH5O43196 834 aa15.53■□□□□ 0.08
FARP1-205ENST00000457029 WIZO95785 1651 aa15.52■□□□□ 0.08
FARP1-205ENST00000457029 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
FARP1-205ENST00000457029 ILDR1Q86SU0 546 aaPredicted RBP15.46■□□□□ 0.07
FARP1-205ENST00000457029 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
FARP1-205ENST00000457029 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
FARP1-205ENST00000457029 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
FARP1-205ENST00000457029 MRC2Q9UBG0 1479 aa15.43■□□□□ 0.06
FARP1-205ENST00000457029 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
FARP1-205ENST00000457029 ARHGEF11O15085 1522 aa15.42■□□□□ 0.06
FARP1-205ENST00000457029 WDR62O43379 1518 aa15.42■□□□□ 0.06
FARP1-205ENST00000457029 CYB5RLQ6IPT4 315 aa15.29■□□□□ 0.04
FARP1-205ENST00000457029 CADPSQ9ULU8 1353 aa15.26■□□□□ 0.03
FARP1-205ENST00000457029 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
FARP1-205ENST00000457029 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
FARP1-205ENST00000457029 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
FARP1-205ENST00000457029 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
FARP1-205ENST00000457029 CFTRP13569 1480 aa15.01□□□□□ -0.01
FARP1-205ENST00000457029 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
FARP1-205ENST00000457029 PRDM2Q13029 1718 aa14.97□□□□□ -0.01
FARP1-205ENST00000457029 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
FARP1-205ENST00000457029 ZNF608Q9ULD9 1512 aaPredicted RBP14.93□□□□□ -0.02
FARP1-205ENST00000457029 CHD1O14646 1710 aa14.93□□□□□ -0.02
FARP1-205ENST00000457029 EIF4G3O43432 1585 aaKnown RBP14.84□□□□□ -0.03
FARP1-205ENST00000457029 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
FARP1-205ENST00000457029 KDM4FA0A1W2PPD8 638 aa14.78□□□□□ -0.04
FARP1-205ENST00000457029 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
FARP1-205ENST00000457029 BIVM-ERCC5R4GMW8 1640 aa14.75□□□□□ -0.05
FARP1-205ENST00000457029 FBLN2P98095 1184 aa14.75□□□□□ -0.05
FARP1-205ENST00000457029 SYNJ1O43426 1573 aa14.74□□□□□ -0.05
FARP1-205ENST00000457029 TOP2BQ02880 1626 aa14.73□□□□□ -0.05
FARP1-205ENST00000457029 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
FARP1-205ENST00000457029 CUX1P39880 1505 aa14.71□□□□□ -0.06
FARP1-205ENST00000457029 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
FARP1-205ENST00000457029 AQRO60306 1485 aaKnown RBP eCLIP14.69□□□□□ -0.067e-7■■■■□ 24.2
FARP1-205ENST00000457029 KIF13AQ9H1H9 1805 aa14.68□□□□□ -0.06
FARP1-205ENST00000457029 DNMBPQ6XZF7 1577 aa14.67□□□□□ -0.06
FARP1-205ENST00000457029 ERCC6L2Q5T890 1561 aa14.64□□□□□ -0.07
FARP1-205ENST00000457029 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
FARP1-205ENST00000457029 GAPVD1Q14C86 1478 aa14.61□□□□□ -0.07
FARP1-205ENST00000457029 LMTK3Q96Q04 1460 aa14.59□□□□□ -0.07
FARP1-205ENST00000457029 FBXO41Q8TF61 875 aa14.59□□□□□ -0.07
FARP1-205ENST00000457029 HECW2Q9P2P5 1572 aa14.59□□□□□ -0.07
FARP1-205ENST00000457029 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
FARP1-205ENST00000457029 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
FARP1-205ENST00000457029 CHMP7Q8WUX9 453 aaPredicted RBP14.54□□□□□ -0.08
FARP1-205ENST00000457029 SNAPC4Q5SXM2 1469 aa14.54□□□□□ -0.08
FARP1-205ENST00000457029 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
FARP1-205ENST00000457029 MAGI1Q96QZ7 1491 aaPredicted RBP14.51□□□□□ -0.09
FARP1-205ENST00000457029 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
FARP1-205ENST00000457029 EEA1Q15075 1411 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms