RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
PHACTR4-209ENST00000633371 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
PHACTR4-209ENST00000633371 ABCC9O60706 1549 aa28.16■■■□□ 2.1
PHACTR4-209ENST00000633371 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
PHACTR4-209ENST00000633371 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
PHACTR4-209ENST00000633371 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
PHACTR4-209ENST00000633371 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
PHACTR4-209ENST00000633371 NACADO15069 1562 aa27.48■■□□□ 1.99
PHACTR4-209ENST00000633371 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
PHACTR4-209ENST00000633371 SCRIBQ14160 1630 aa26.95■■□□□ 1.91
PHACTR4-209ENST00000633371 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
PHACTR4-209ENST00000633371 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
PHACTR4-209ENST00000633371 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
PHACTR4-209ENST00000633371 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
PHACTR4-209ENST00000633371 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
PHACTR4-209ENST00000633371 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
PHACTR4-209ENST00000633371 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
PHACTR4-209ENST00000633371 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
PHACTR4-209ENST00000633371 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
PHACTR4-209ENST00000633371 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
PHACTR4-209ENST00000633371 WIZO95785 1651 aa25.64■■□□□ 1.69
PHACTR4-209ENST00000633371 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
PHACTR4-209ENST00000633371 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
PHACTR4-209ENST00000633371 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
PHACTR4-209ENST00000633371 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.67
PHACTR4-209ENST00000633371 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
PHACTR4-209ENST00000633371 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
PHACTR4-209ENST00000633371 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
PHACTR4-209ENST00000633371 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
PHACTR4-209ENST00000633371 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
PHACTR4-209ENST00000633371 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
PHACTR4-209ENST00000633371 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
PHACTR4-209ENST00000633371 CFTRP13569 1480 aa24.67■■□□□ 1.54
PHACTR4-209ENST00000633371 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
PHACTR4-209ENST00000633371 NESP48681 1621 aa24.64■■□□□ 1.53
PHACTR4-209ENST00000633371 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
PHACTR4-209ENST00000633371 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
PHACTR4-209ENST00000633371 ABCC8Q09428 1581 aa24.38■■□□□ 1.49
PHACTR4-209ENST00000633371 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
PHACTR4-209ENST00000633371 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
PHACTR4-209ENST00000633371 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
PHACTR4-209ENST00000633371 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
PHACTR4-209ENST00000633371 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
PHACTR4-209ENST00000633371 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
PHACTR4-209ENST00000633371 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
PHACTR4-209ENST00000633371 CUX1P39880 1505 aa24.21■■□□□ 1.47
PHACTR4-209ENST00000633371 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
PHACTR4-209ENST00000633371 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
PHACTR4-209ENST00000633371 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
PHACTR4-209ENST00000633371 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
PHACTR4-209ENST00000633371 DNMBPQ6XZF7 1577 aa24.1■■□□□ 1.45
PHACTR4-209ENST00000633371 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
PHACTR4-209ENST00000633371 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
PHACTR4-209ENST00000633371 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
PHACTR4-209ENST00000633371 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
PHACTR4-209ENST00000633371 WDR62O43379 1518 aa24.01■■□□□ 1.43
PHACTR4-209ENST00000633371 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
PHACTR4-209ENST00000633371 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
PHACTR4-209ENST00000633371 CUX2O14529 1486 aa23.87■■□□□ 1.41
PHACTR4-209ENST00000633371 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
PHACTR4-209ENST00000633371 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
PHACTR4-209ENST00000633371 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
PHACTR4-209ENST00000633371 SOGA1O94964 1423 aa23.81■■□□□ 1.4
PHACTR4-209ENST00000633371 RUSC2Q8N2Y8 1516 aa23.8■■□□□ 1.4
PHACTR4-209ENST00000633371 ABCA10Q8WWZ4 1543 aa23.76■■□□□ 1.39
PHACTR4-209ENST00000633371 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
PHACTR4-209ENST00000633371 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
PHACTR4-209ENST00000633371 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
PHACTR4-209ENST00000633371 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
PHACTR4-209ENST00000633371 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
PHACTR4-209ENST00000633371 KIF27Q86VH2 1401 aa23.62■■□□□ 1.37
PHACTR4-209ENST00000633371 EEA1Q15075 1411 aa23.61■■□□□ 1.37
PHACTR4-209ENST00000633371 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.36
PHACTR4-209ENST00000633371 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
PHACTR4-209ENST00000633371 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
PHACTR4-209ENST00000633371 CSRNP3Q8WYN3 585 aa23.54■■□□□ 1.36
PHACTR4-209ENST00000633371 IGF1RP08069 1367 aa23.53■■□□□ 1.36
PHACTR4-209ENST00000633371 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
PHACTR4-209ENST00000633371 ERICH3Q5RHP9 1530 aa23.46■■□□□ 1.35
PHACTR4-209ENST00000633371 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
PHACTR4-209ENST00000633371 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
PHACTR4-209ENST00000633371 KIF21BO75037 1637 aa23.41■■□□□ 1.34
PHACTR4-209ENST00000633371 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
PHACTR4-209ENST00000633371 CUL7Q14999 1698 aa23.38■■□□□ 1.33
PHACTR4-209ENST00000633371 CARMIL1Q5VZK9 1371 aa23.37■■□□□ 1.33
PHACTR4-209ENST00000633371 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
PHACTR4-209ENST00000633371 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
PHACTR4-209ENST00000633371 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
PHACTR4-209ENST00000633371 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
PHACTR4-209ENST00000633371 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
PHACTR4-209ENST00000633371 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
PHACTR4-209ENST00000633371 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
PHACTR4-209ENST00000633371 SYNJ2O15056 1496 aa23.19■■□□□ 1.3
PHACTR4-209ENST00000633371 CHD1O14646 1710 aa23.18■■□□□ 1.3
PHACTR4-209ENST00000633371 GRIN2AQ12879 1464 aa23.16■■□□□ 1.3
PHACTR4-209ENST00000633371 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
PHACTR4-209ENST00000633371 UBTFP17480 764 aaKnown RBP23.12■■□□□ 1.29
PHACTR4-209ENST00000633371 CTTNBP2Q8WZ74 1663 aa23.1■■□□□ 1.29
PHACTR4-209ENST00000633371 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
PHACTR4-209ENST00000633371 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms