RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 AEBP2Q6ZN18 517 aaPredicted RBP26.65■■□□□ 1.86
UBE2N-204ENST00000549833 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
UBE2N-204ENST00000549833 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
UBE2N-204ENST00000549833 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
UBE2N-204ENST00000549833 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
UBE2N-204ENST00000549833 FOXD1Q16676 465 aa21■□□□□ 0.95
UBE2N-204ENST00000549833 ADRA2BP18089 450 aa20.19■□□□□ 0.82
UBE2N-204ENST00000549833 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
UBE2N-204ENST00000549833 PIAS4Q8N2W9 510 aaPredicted RBP19.87■□□□□ 0.77
UBE2N-204ENST00000549833 MSH5O43196 834 aa19.45■□□□□ 0.7
UBE2N-204ENST00000549833 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
UBE2N-204ENST00000549833 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
UBE2N-204ENST00000549833 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
UBE2N-204ENST00000549833 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
UBE2N-204ENST00000549833 KCNA4P22459 653 aa18.25■□□□□ 0.51
UBE2N-204ENST00000549833 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
UBE2N-204ENST00000549833 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
UBE2N-204ENST00000549833 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
UBE2N-204ENST00000549833 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
UBE2N-204ENST00000549833 HOXD11P31277 338 aaPredicted RBP17.74■□□□□ 0.43
UBE2N-204ENST00000549833 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
UBE2N-204ENST00000549833 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
UBE2N-204ENST00000549833 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
UBE2N-204ENST00000549833 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
UBE2N-204ENST00000549833 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
UBE2N-204ENST00000549833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
UBE2N-204ENST00000549833 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
UBE2N-204ENST00000549833 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
UBE2N-204ENST00000549833 ZBTB22O15209 634 aa16.76■□□□□ 0.27
UBE2N-204ENST00000549833 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
UBE2N-204ENST00000549833 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
UBE2N-204ENST00000549833 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
UBE2N-204ENST00000549833 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
UBE2N-204ENST00000549833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
UBE2N-204ENST00000549833 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
UBE2N-204ENST00000549833 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
UBE2N-204ENST00000549833 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
UBE2N-204ENST00000549833 APLP2Q06481 763 aa16.37■□□□□ 0.21
UBE2N-204ENST00000549833 ATXN8OSP0DMR3 200 aa16.27■□□□□ 0.2
UBE2N-204ENST00000549833 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
UBE2N-204ENST00000549833 CAPN15O75808 1086 aa16.13■□□□□ 0.17
UBE2N-204ENST00000549833 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
UBE2N-204ENST00000549833 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
UBE2N-204ENST00000549833 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
UBE2N-204ENST00000549833 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
UBE2N-204ENST00000549833 DSG3P32926 999 aa15.81■□□□□ 0.12
UBE2N-204ENST00000549833 ABCB7O75027 752 aa15.79■□□□□ 0.12
UBE2N-204ENST00000549833 POLA2Q14181 598 aa15.75■□□□□ 0.11
UBE2N-204ENST00000549833 ZBTB12Q9Y330 459 aaPredicted RBP15.59■□□□□ 0.09
UBE2N-204ENST00000549833 FBLN2P98095 1184 aa15.52■□□□□ 0.08
UBE2N-204ENST00000549833 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
UBE2N-204ENST00000549833 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
UBE2N-204ENST00000549833 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
UBE2N-204ENST00000549833 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
UBE2N-204ENST00000549833 FKBP8Q14318 412 aa15.15■□□□□ 0.02
UBE2N-204ENST00000549833 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
UBE2N-204ENST00000549833 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
UBE2N-204ENST00000549833 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
UBE2N-204ENST00000549833 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
UBE2N-204ENST00000549833 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
UBE2N-204ENST00000549833 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
UBE2N-204ENST00000549833 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
UBE2N-204ENST00000549833 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
UBE2N-204ENST00000549833 PROM2Q8N271 834 aa14.84□□□□□ -0.03
UBE2N-204ENST00000549833 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
UBE2N-204ENST00000549833 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
UBE2N-204ENST00000549833 STAG3Q9UJ98 1225 aa14.66□□□□□ -0.06
UBE2N-204ENST00000549833 FBXO3Q9UK99 471 aa14.65□□□□□ -0.06
UBE2N-204ENST00000549833 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
UBE2N-204ENST00000549833 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
UBE2N-204ENST00000549833 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
UBE2N-204ENST00000549833 CHRDL2Q6WN34 429 aa14.46□□□□□ -0.09
UBE2N-204ENST00000549833 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
UBE2N-204ENST00000549833 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
UBE2N-204ENST00000549833 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
UBE2N-204ENST00000549833 MIER1Q8N108 512 aa14.32□□□□□ -0.12
UBE2N-204ENST00000549833 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
UBE2N-204ENST00000549833 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
UBE2N-204ENST00000549833 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
UBE2N-204ENST00000549833 PRKAR2AP13861 404 aaKnown RBP14.23□□□□□ -0.13
UBE2N-204ENST00000549833 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
UBE2N-204ENST00000549833 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
UBE2N-204ENST00000549833 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
UBE2N-204ENST00000549833 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
UBE2N-204ENST00000549833 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
UBE2N-204ENST00000549833 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
UBE2N-204ENST00000549833 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
UBE2N-204ENST00000549833 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
UBE2N-204ENST00000549833 POTEHQ6S545 545 aa13.97□□□□□ -0.17
UBE2N-204ENST00000549833 NUBP1P53384 320 aa13.93□□□□□ -0.18
UBE2N-204ENST00000549833 FAM212AQ96EL1 285 aa13.91□□□□□ -0.18
UBE2N-204ENST00000549833 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
UBE2N-204ENST00000549833 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
UBE2N-204ENST00000549833 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
UBE2N-204ENST00000549833 GSE1Q14687 1217 aa13.85□□□□□ -0.19
UBE2N-204ENST00000549833 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
UBE2N-204ENST00000549833 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
UBE2N-204ENST00000549833 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
UBE2N-204ENST00000549833 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
UBE2N-204ENST00000549833 HAX1O00165 279 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms