RNA–Protein interactions for RNA: ENST00000640998.1

SCP2-217, Transcript of sterol carrier protein 2, humanhuman

TSL 5 BASIC

Gene SCP2, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-217ENST00000640998 NISCHQ9Y2I1 1504 aa34.95■■■■□ 3.19
SCP2-217ENST00000640998 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
SCP2-217ENST00000640998 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
SCP2-217ENST00000640998 ABCC9O60706 1549 aa29.16■■■□□ 2.26
SCP2-217ENST00000640998 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
SCP2-217ENST00000640998 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
SCP2-217ENST00000640998 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
SCP2-217ENST00000640998 NACADO15069 1562 aa28.68■■■□□ 2.18
SCP2-217ENST00000640998 RB1CC1Q8TDY2 1594 aa28.49■■■□□ 2.15
SCP2-217ENST00000640998 SCRIBQ14160 1630 aa28.02■■■□□ 2.08
SCP2-217ENST00000640998 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
SCP2-217ENST00000640998 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
SCP2-217ENST00000640998 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
SCP2-217ENST00000640998 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
SCP2-217ENST00000640998 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
SCP2-217ENST00000640998 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
SCP2-217ENST00000640998 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
SCP2-217ENST00000640998 SMARCA4P51532 1647 aa26.93■■□□□ 1.9
SCP2-217ENST00000640998 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
SCP2-217ENST00000640998 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
SCP2-217ENST00000640998 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
SCP2-217ENST00000640998 PEG3Q9GZU2 1588 aa26.7■■□□□ 1.86
SCP2-217ENST00000640998 WIZO95785 1651 aa26.66■■□□□ 1.86
SCP2-217ENST00000640998 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
SCP2-217ENST00000640998 ATAD2BQ9ULI0 1458 aa26.57■■□□□ 1.84
SCP2-217ENST00000640998 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
SCP2-217ENST00000640998 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
SCP2-217ENST00000640998 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
SCP2-217ENST00000640998 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
SCP2-217ENST00000640998 BAZ1BQ9UIG0 1483 aaKnown RBP26.38■■□□□ 1.81
SCP2-217ENST00000640998 CCDC88BA6NC98 1476 aa26.14■■□□□ 1.78
SCP2-217ENST00000640998 DNAJC5BQ9UF47 199 aa26.01■■□□□ 1.75
SCP2-217ENST00000640998 CFTRP13569 1480 aa25.75■■□□□ 1.71
SCP2-217ENST00000640998 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
SCP2-217ENST00000640998 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
SCP2-217ENST00000640998 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
SCP2-217ENST00000640998 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
SCP2-217ENST00000640998 NESP48681 1621 aa25.49■■□□□ 1.67
SCP2-217ENST00000640998 ABCC8Q09428 1581 aa25.4■■□□□ 1.66
SCP2-217ENST00000640998 PDS5BQ9NTI5 1447 aa25.4■■□□□ 1.66
SCP2-217ENST00000640998 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
SCP2-217ENST00000640998 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
SCP2-217ENST00000640998 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
SCP2-217ENST00000640998 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
SCP2-217ENST00000640998 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
SCP2-217ENST00000640998 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
SCP2-217ENST00000640998 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
SCP2-217ENST00000640998 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
SCP2-217ENST00000640998 CUX1P39880 1505 aa25.21■■□□□ 1.63
SCP2-217ENST00000640998 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
SCP2-217ENST00000640998 URB2Q14146 1524 aaKnown RBP25.09■■□□□ 1.61
SCP2-217ENST00000640998 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
SCP2-217ENST00000640998 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
SCP2-217ENST00000640998 ERCC6Q03468 1493 aa25.08■■□□□ 1.6
SCP2-217ENST00000640998 WDR62O43379 1518 aa24.98■■□□□ 1.59
SCP2-217ENST00000640998 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
SCP2-217ENST00000640998 THOC2Q8NI27 1593 aaKnown RBP24.96■■□□□ 1.59
SCP2-217ENST00000640998 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
SCP2-217ENST00000640998 EEA1Q15075 1411 aa24.91■■□□□ 1.58
SCP2-217ENST00000640998 SOGA1O94964 1423 aa24.86■■□□□ 1.57
SCP2-217ENST00000640998 ABCA10Q8WWZ4 1543 aa24.82■■□□□ 1.56
SCP2-217ENST00000640998 RAD54L2Q9Y4B4 1467 aa24.78■■□□□ 1.56
SCP2-217ENST00000640998 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
SCP2-217ENST00000640998 CUX2O14529 1486 aa24.77■■□□□ 1.56
SCP2-217ENST00000640998 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
SCP2-217ENST00000640998 TARBP1Q13395 1621 aaKnown RBP24.77■■□□□ 1.56
SCP2-217ENST00000640998 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
SCP2-217ENST00000640998 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
SCP2-217ENST00000640998 FAM9AQ8IZU1 332 aaPredicted RBP24.72■■□□□ 1.55
SCP2-217ENST00000640998 CSRNP3Q8WYN3 585 aa24.7■■□□□ 1.54
SCP2-217ENST00000640998 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
SCP2-217ENST00000640998 IGF1RP08069 1367 aa24.58■■□□□ 1.53
SCP2-217ENST00000640998 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
SCP2-217ENST00000640998 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
SCP2-217ENST00000640998 KIF21BO75037 1637 aa24.56■■□□□ 1.52
SCP2-217ENST00000640998 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
SCP2-217ENST00000640998 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
SCP2-217ENST00000640998 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
SCP2-217ENST00000640998 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.51
SCP2-217ENST00000640998 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
SCP2-217ENST00000640998 CUL7Q14999 1698 aa24.48■■□□□ 1.51
SCP2-217ENST00000640998 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
SCP2-217ENST00000640998 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
SCP2-217ENST00000640998 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
SCP2-217ENST00000640998 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
SCP2-217ENST00000640998 CARMIL1Q5VZK9 1371 aa24.44■■□□□ 1.5
SCP2-217ENST00000640998 RAPGEF2Q9Y4G8 1499 aa24.39■■□□□ 1.5
SCP2-217ENST00000640998 TNIKQ9UKE5 1360 aa24.34■■□□□ 1.49
SCP2-217ENST00000640998 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
SCP2-217ENST00000640998 ADAMTS12P58397 1594 aa24.33■■□□□ 1.48
SCP2-217ENST00000640998 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
SCP2-217ENST00000640998 SNAPC4Q5SXM2 1469 aa24.29■■□□□ 1.48
SCP2-217ENST00000640998 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
SCP2-217ENST00000640998 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
SCP2-217ENST00000640998 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
SCP2-217ENST00000640998 GRIN2AQ12879 1464 aa24.14■■□□□ 1.46
SCP2-217ENST00000640998 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
SCP2-217ENST00000640998 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
SCP2-217ENST00000640998 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
SCP2-217ENST00000640998 CLIP1P30622 1438 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms