RNA–Protein interactions for RNA: ENST00000478631.6

SCP2-210, Transcript of sterol carrier protein 2, humanhuman

TSL 2

Gene SCP2, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-210ENST00000478631 DCAF8L2P0C7V8 631 aa21.1■□□□□ 0.97
SCP2-210ENST00000478631 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
SCP2-210ENST00000478631 SUPT5HO00267 1087 aaKnown RBP20.21■□□□□ 0.83
SCP2-210ENST00000478631 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
SCP2-210ENST00000478631 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
SCP2-210ENST00000478631 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
SCP2-210ENST00000478631 APLP2Q06481 763 aa18.91■□□□□ 0.62
SCP2-210ENST00000478631 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
SCP2-210ENST00000478631 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
SCP2-210ENST00000478631 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
SCP2-210ENST00000478631 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
SCP2-210ENST00000478631 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
SCP2-210ENST00000478631 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
SCP2-210ENST00000478631 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
SCP2-210ENST00000478631 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
SCP2-210ENST00000478631 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
SCP2-210ENST00000478631 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
SCP2-210ENST00000478631 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
SCP2-210ENST00000478631 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
SCP2-210ENST00000478631 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
SCP2-210ENST00000478631 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.49
SCP2-210ENST00000478631 HRCP23327 699 aa17.96■□□□□ 0.47
SCP2-210ENST00000478631 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
SCP2-210ENST00000478631 ITGAEP38570 1179 aa17.8■□□□□ 0.44
SCP2-210ENST00000478631 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
SCP2-210ENST00000478631 NEFLP07196 543 aa17.77■□□□□ 0.43
SCP2-210ENST00000478631 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
SCP2-210ENST00000478631 ABCC9O60706 1549 aa17.69■□□□□ 0.42
SCP2-210ENST00000478631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
SCP2-210ENST00000478631 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
SCP2-210ENST00000478631 POLR3GLQ9BT43 218 aa17.48■□□□□ 0.39
SCP2-210ENST00000478631 MYT1LQ9UL68 1186 aa17.44■□□□□ 0.38
SCP2-210ENST00000478631 DIEXFQ68CQ4 756 aaKnown RBP17.4■□□□□ 0.38
SCP2-210ENST00000478631 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
SCP2-210ENST00000478631 FAM50AQ14320 339 aaKnown RBP17.35■□□□□ 0.37
SCP2-210ENST00000478631 MYT1Q01538 1121 aa17.24■□□□□ 0.35
SCP2-210ENST00000478631 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
SCP2-210ENST00000478631 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
SCP2-210ENST00000478631 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
SCP2-210ENST00000478631 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
SCP2-210ENST00000478631 DAXXQ9UER7 740 aaPredicted RBP17.1■□□□□ 0.33
SCP2-210ENST00000478631 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
SCP2-210ENST00000478631 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
SCP2-210ENST00000478631 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
SCP2-210ENST00000478631 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
SCP2-210ENST00000478631 FBLN2P98095 1184 aa17.02■□□□□ 0.31
SCP2-210ENST00000478631 GTF3C3Q9Y5Q9 886 aa17.01■□□□□ 0.31
SCP2-210ENST00000478631 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
SCP2-210ENST00000478631 ANP32CO43423 234 aa16.97■□□□□ 0.31
SCP2-210ENST00000478631 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
SCP2-210ENST00000478631 BCANQ96GW7 911 aa16.93■□□□□ 0.3
SCP2-210ENST00000478631 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
SCP2-210ENST00000478631 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
SCP2-210ENST00000478631 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
SCP2-210ENST00000478631 ACIN1Q9UKV3 1341 aaKnown RBP16.81■□□□□ 0.28
SCP2-210ENST00000478631 ZNF777Q9ULD5 760 aaPredicted RBP16.78■□□□□ 0.28
SCP2-210ENST00000478631 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
SCP2-210ENST00000478631 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
SCP2-210ENST00000478631 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
SCP2-210ENST00000478631 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
SCP2-210ENST00000478631 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
SCP2-210ENST00000478631 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
SCP2-210ENST00000478631 CLIP1P30622 1438 aa16.6■□□□□ 0.25
SCP2-210ENST00000478631 CHIC2Q9UKJ5 165 aa16.58■□□□□ 0.24
SCP2-210ENST00000478631 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
SCP2-210ENST00000478631 RB1CC1Q8TDY2 1594 aa16.53■□□□□ 0.24
SCP2-210ENST00000478631 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCP2-210ENST00000478631 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
SCP2-210ENST00000478631 FKBP8Q14318 412 aa16.51■□□□□ 0.23
SCP2-210ENST00000478631 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
SCP2-210ENST00000478631 EEA1Q15075 1411 aa16.5■□□□□ 0.23
SCP2-210ENST00000478631 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
SCP2-210ENST00000478631 NEFMP07197 916 aa16.46■□□□□ 0.23
SCP2-210ENST00000478631 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
SCP2-210ENST00000478631 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
SCP2-210ENST00000478631 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.22
SCP2-210ENST00000478631 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
SCP2-210ENST00000478631 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
SCP2-210ENST00000478631 MIER1Q8N108 512 aa16.43■□□□□ 0.22
SCP2-210ENST00000478631 NACADO15069 1562 aa16.43■□□□□ 0.22
SCP2-210ENST00000478631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■■■□□ 14.9
SCP2-210ENST00000478631 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
SCP2-210ENST00000478631 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
SCP2-210ENST00000478631 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
SCP2-210ENST00000478631 HIRIP3Q9BW71 556 aaPredicted RBP16.4■□□□□ 0.22
SCP2-210ENST00000478631 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
SCP2-210ENST00000478631 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
SCP2-210ENST00000478631 TNIKQ9UKE5 1360 aa16.37■□□□□ 0.21
SCP2-210ENST00000478631 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
SCP2-210ENST00000478631 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
SCP2-210ENST00000478631 RRP7BPQ9NSQ0 103 aa16.36■□□□□ 0.21
SCP2-210ENST00000478631 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCP2-210ENST00000478631 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
SCP2-210ENST00000478631 KDM2AQ9Y2K7 1162 aa16.35■□□□□ 0.21
SCP2-210ENST00000478631 NPM2Q86SE8 214 aaKnown RBP16.35■□□□□ 0.21
SCP2-210ENST00000478631 MRS2Q9HD23 443 aa16.33■□□□□ 0.21
SCP2-210ENST00000478631 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.2
SCP2-210ENST00000478631 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
SCP2-210ENST00000478631 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
SCP2-210ENST00000478631 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms