RNA–Protein interactions for RNA: ENST00000290921.10

CTBP1-201, Transcript of C-terminal binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CTBP1, Length 2,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTBP1-201ENST00000290921 NISCHQ9Y2I1 1504 aa51.88■■■■■ 5.9
CTBP1-201ENST00000290921 SHROOM4Q9ULL8 1493 aa44.14■■■■■ 4.66
CTBP1-201ENST00000290921 CCDC180Q9P1Z9 1646 aa44.11■■■■■ 4.65
CTBP1-201ENST00000290921 ZCCHC6Q5VYS8 1495 aaKnown RBP43.95■■■■■ 4.63
CTBP1-201ENST00000290921 SUPT5HO00267 1087 aaKnown RBP43.35■■■■■ 4.53
CTBP1-201ENST00000290921 DCAF8L2P0C7V8 631 aa42.72■■■■■ 4.43
CTBP1-201ENST00000290921 DCAF1Q9Y4B6 1507 aa42.66■■■■■ 4.42
CTBP1-201ENST00000290921 CHIC1Q5VXU3 224 aa42.32■■■■■ 4.37
CTBP1-201ENST00000290921 MYO15BQ96JP2 1530 aa42.3■■■■■ 4.36
CTBP1-201ENST00000290921 HRCP23327 699 aa41.86■■■■■ 4.29
CTBP1-201ENST00000290921 PCGF6Q9BYE7 350 aa41.51■■■■■ 4.24
CTBP1-201ENST00000290921 ABCC9O60706 1549 aa41.51■■■■■ 4.24
CTBP1-201ENST00000290921 SCRIBQ14160 1630 aa41.25■■■■■ 4.19
CTBP1-201ENST00000290921 LOC105371045A0A1W2PR82 267 aa41.1■■■■■ 4.17
CTBP1-201ENST00000290921 RSF1Q96T23 1441 aaPredicted RBP41.08■■■■■ 4.17
CTBP1-201ENST00000290921 PPARGC1BQ86YN6 1023 aaKnown RBP40.9■■■■■ 4.14
CTBP1-201ENST00000290921 NACADO15069 1562 aa40.72■■■■■ 4.11
CTBP1-201ENST00000290921 RB1CC1Q8TDY2 1594 aa40.7■■■■■ 4.11
CTBP1-201ENST00000290921 TRIM26Q12899 539 aaPredicted RBP40.63■■■■■ 4.09
CTBP1-201ENST00000290921 TRIM41Q8WV44 630 aa40.43■■■■■ 4.06
CTBP1-201ENST00000290921 CECR2Q9BXF3 1484 aa40.39■■■■■ 4.06
CTBP1-201ENST00000290921 MROH2BQ7Z745 1585 aa40.31■■■■■ 4.04
CTBP1-201ENST00000290921 WIZO95785 1651 aa40.08■■■■■ 4.01
CTBP1-201ENST00000290921 FAM9AQ8IZU1 332 aaPredicted RBP40.02■■■■■ 4
CTBP1-201ENST00000290921 ZEB1P37275 1124 aaPredicted RBP39.96■■■■□ 3.99
CTBP1-201ENST00000290921 BAZ1AQ9NRL2 1556 aaPredicted RBP39.93■■■■□ 3.98
CTBP1-201ENST00000290921 EIF4G1Q04637 1599 aaKnown RBP39.72■■■■□ 3.95
CTBP1-201ENST00000290921 EHMT2Q96KQ7 1210 aa39.63■■■■□ 3.94
CTBP1-201ENST00000290921 TOP2AP11388 1531 aaKnown RBP39.53■■■■□ 3.92
CTBP1-201ENST00000290921 SMARCA4P51532 1647 aa39.49■■■■□ 3.91
CTBP1-201ENST00000290921 UNC13AQ9UPW8 1703 aa39.39■■■■□ 3.9
CTBP1-201ENST00000290921 CCDC88BA6NC98 1476 aa39.31■■■■□ 3.88
CTBP1-201ENST00000290921 SMARCA2P51531 1590 aa39.3■■■■□ 3.88
CTBP1-201ENST00000290921 ABCC8Q09428 1581 aa39.22■■■■□ 3.87
CTBP1-201ENST00000290921 BICRAQ9NZM4 1560 aa38.91■■■■□ 3.82
CTBP1-201ENST00000290921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.89■■■■□ 3.82
CTBP1-201ENST00000290921 SOGA1O94964 1423 aa38.88■■■■□ 3.81
CTBP1-201ENST00000290921 WRNQ14191 1432 aaPredicted RBP eCLIP38.87■■■■□ 3.814e-8■■■■■ 27.9
CTBP1-201ENST00000290921 SCAF1Q9H7N4 1312 aaKnown RBP38.87■■■■□ 3.81
CTBP1-201ENST00000290921 CCER1Q8TC90 406 aaPredicted RBP38.83■■■■□ 3.81
CTBP1-201ENST00000290921 EEA1Q15075 1411 aa38.82■■■■□ 3.81
CTBP1-201ENST00000290921 CEP162Q5TB80 1403 aa38.81■■■■□ 3.8
CTBP1-201ENST00000290921 PEG3Q9GZU2 1588 aa38.78■■■■□ 3.8
CTBP1-201ENST00000290921 PABPN1Q86U42 306 aaKnown RBP eCLIP38.77■■■■□ 3.81e-6■□□□□ 10.7
CTBP1-201ENST00000290921 TNIKQ9UKE5 1360 aa38.77■■■■□ 3.8
CTBP1-201ENST00000290921 CSRNP3Q8WYN3 585 aa38.67■■■■□ 3.78
CTBP1-201ENST00000290921 RUSC2Q8N2Y8 1516 aa38.66■■■■□ 3.78
CTBP1-201ENST00000290921 PELP1Q8IZL8 1130 aaKnown RBP38.64■■■■□ 3.78
CTBP1-201ENST00000290921 GOLGA3Q08378 1498 aa38.53■■■■□ 3.76
CTBP1-201ENST00000290921 TTBK1Q5TCY1 1321 aaPredicted RBP38.49■■■■□ 3.75
CTBP1-201ENST00000290921 UBTFP17480 764 aaKnown RBP38.47■■■■□ 3.75
CTBP1-201ENST00000290921 ATAD2BQ9ULI0 1458 aa38.42■■■■□ 3.74
CTBP1-201ENST00000290921 SYNJ1O43426 1573 aa38.4■■■■□ 3.74
CTBP1-201ENST00000290921 ACIN1Q9UKV3 1341 aaKnown RBP38.35■■■■□ 3.73
CTBP1-201ENST00000290921 DIEXFQ68CQ4 756 aaKnown RBP38.35■■■■□ 3.73
CTBP1-201ENST00000290921 BAZ1BQ9UIG0 1483 aaKnown RBP38.32■■■■□ 3.72
CTBP1-201ENST00000290921 CEP164Q9UPV0 1460 aa38.3■■■■□ 3.72
CTBP1-201ENST00000290921 KIF21BO75037 1637 aa38.29■■■■□ 3.72
CTBP1-201ENST00000290921 NEUROD1Q13562 356 aa38.24■■■■□ 3.71
CTBP1-201ENST00000290921 CENPBP07199 599 aaPredicted RBP38.07■■■■□ 3.69
CTBP1-201ENST00000290921 CLIP1P30622 1438 aa38.06■■■■□ 3.68
CTBP1-201ENST00000290921 TOP2BQ02880 1626 aa37.96■■■■□ 3.67
CTBP1-201ENST00000290921 RAPGEF2Q9Y4G8 1499 aa37.95■■■■□ 3.67
CTBP1-201ENST00000290921 ZNF316A6NFI3 1004 aaPredicted RBP37.95■■■■□ 3.67
CTBP1-201ENST00000290921 VPS8Q8N3P4 1428 aa37.94■■■■□ 3.66
CTBP1-201ENST00000290921 GTF3C3Q9Y5Q9 886 aa37.92■■■■□ 3.66
CTBP1-201ENST00000290921 BIVM-ERCC5R4GMW8 1640 aa37.83■■■■□ 3.65
CTBP1-201ENST00000290921 HNRNPUL2Q1KMD3 747 aaKnown RBP37.76■■■■□ 3.63
CTBP1-201ENST00000290921 HMGXB3Q12766 1538 aa37.71■■■■□ 3.63
CTBP1-201ENST00000290921 APLP2Q06481 763 aa37.67■■■■□ 3.62
CTBP1-201ENST00000290921 NCAPD3P42695 1498 aa37.67■■■■□ 3.62
CTBP1-201ENST00000290921 ERICH3Q5RHP9 1530 aa37.66■■■■□ 3.62
CTBP1-201ENST00000290921 PRXQ9BXM0 1461 aa37.62■■■■□ 3.61
CTBP1-201ENST00000290921 RANGAP1P46060 587 aaPredicted RBP37.56■■■■□ 3.6
CTBP1-201ENST00000290921 CUX1P39880 1505 aa37.53■■■■□ 3.6
CTBP1-201ENST00000290921 YTHDC1Q96MU7 727 aaKnown RBP37.46■■■■□ 3.59
CTBP1-201ENST00000290921 ARAP1Q96P48 1450 aa37.46■■■■□ 3.59
CTBP1-201ENST00000290921 MIER1Q8N108 512 aa37.45■■■■□ 3.59
CTBP1-201ENST00000290921 CFTRP13569 1480 aa37.41■■■■□ 3.58
CTBP1-201ENST00000290921 KIF27Q86VH2 1401 aa37.39■■■■□ 3.58
CTBP1-201ENST00000290921 KANK4Q5T7N3 995 aaPredicted RBP37.18■■■■□ 3.54
CTBP1-201ENST00000290921 PRDM2Q13029 1718 aa37.14■■■■□ 3.54
CTBP1-201ENST00000290921 CLSPNQ9HAW4 1339 aa37.14■■■■□ 3.54
CTBP1-201ENST00000290921 ARHGAP35Q9NRY4 1499 aa37.1■■■■□ 3.53
CTBP1-201ENST00000290921 RRBP1Q9P2E9 1410 aaKnown RBP37.1■■■■□ 3.53
CTBP1-201ENST00000290921 DHX57Q6P158 1386 aaKnown RBP37.09■■■■□ 3.53
CTBP1-201ENST00000290921 CUX2O14529 1486 aa36.98■■■■□ 3.51
CTBP1-201ENST00000290921 IGF1RP08069 1367 aa36.95■■■■□ 3.51
CTBP1-201ENST00000290921 CADPSQ9ULU8 1353 aa36.93■■■■□ 3.5
CTBP1-201ENST00000290921 CCNB3Q8WWL7 1395 aa36.89■■■■□ 3.5
CTBP1-201ENST00000290921 FGD5Q6ZNL6 1462 aa36.83■■■■□ 3.49
CTBP1-201ENST00000290921 MYT1Q01538 1121 aa36.79■■■■□ 3.48
CTBP1-201ENST00000290921 CARMIL1Q5VZK9 1371 aa36.79■■■■□ 3.48
CTBP1-201ENST00000290921 MAP3K1Q13233 1512 aa36.77■■■■□ 3.48
CTBP1-201ENST00000290921 TIAM1Q13009 1591 aa36.75■■■■□ 3.47
CTBP1-201ENST00000290921 LRRC9Q6ZRR7 1453 aa36.6■■■■□ 3.45
CTBP1-201ENST00000290921 ITGAEP38570 1179 aa36.59■■■■□ 3.45
CTBP1-201ENST00000290921 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
CTBP1-201ENST00000290921 FANCD2Q9BXW9 1451 aa36.58■■■■□ 3.45
CTBP1-201ENST00000290921 RAB3GAP2Q9H2M9 1393 aa36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms