RNA–Protein interactions for RNA: ENST00000341142.7

GMPPA-202, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GMPPA, Length 1,524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-202ENST00000341142 NISCHQ9Y2I1 1504 aa40.84■■■■■ 4.13
GMPPA-202ENST00000341142 CCDC180Q9P1Z9 1646 aa36.35■■■■□ 3.41
GMPPA-202ENST00000341142 ABCC9O60706 1549 aa36.02■■■■□ 3.36
GMPPA-202ENST00000341142 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.11
GMPPA-202ENST00000341142 DCAF8L2P0C7V8 631 aa34.44■■■■□ 3.1
GMPPA-202ENST00000341142 NACADO15069 1562 aa34.33■■■■□ 3.09
GMPPA-202ENST00000341142 MYO15BQ96JP2 1530 aa34■■■■□ 3.03
GMPPA-202ENST00000341142 ZCCHC6Q5VYS8 1495 aaKnown RBP33.93■■■■□ 3.02
GMPPA-202ENST00000341142 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
GMPPA-202ENST00000341142 PABPN1Q86U42 306 aaKnown RBP eCLIP33.67■■■□□ 2.981e-5■□□□□ 8.6
GMPPA-202ENST00000341142 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
GMPPA-202ENST00000341142 BICRAQ9NZM4 1560 aa33.36■■■□□ 2.93
GMPPA-202ENST00000341142 DNAJC5BQ9UF47 199 aa33.36■■■□□ 2.93
GMPPA-202ENST00000341142 SCRIBQ14160 1630 aa33.23■■■□□ 2.91
GMPPA-202ENST00000341142 SHROOM4Q9ULL8 1493 aa33.02■■■□□ 2.88
GMPPA-202ENST00000341142 EIF4G1Q04637 1599 aaKnown RBP32.55■■■□□ 2.8
GMPPA-202ENST00000341142 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
GMPPA-202ENST00000341142 CECR2Q9BXF3 1484 aa32.4■■■□□ 2.78
GMPPA-202ENST00000341142 SMARCA4P51532 1647 aa31.72■■■□□ 2.67
GMPPA-202ENST00000341142 NCAPD3P42695 1498 aa31.71■■■□□ 2.67
GMPPA-202ENST00000341142 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
GMPPA-202ENST00000341142 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
GMPPA-202ENST00000341142 SMARCA2P51531 1590 aa31.61■■■□□ 2.65
GMPPA-202ENST00000341142 HMGXB3Q12766 1538 aa31.48■■■□□ 2.63
GMPPA-202ENST00000341142 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
GMPPA-202ENST00000341142 BAZ1BQ9UIG0 1483 aaKnown RBP31.42■■■□□ 2.62
GMPPA-202ENST00000341142 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.62
GMPPA-202ENST00000341142 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
GMPPA-202ENST00000341142 WIZO95785 1651 aa31.07■■■□□ 2.56
GMPPA-202ENST00000341142 NESP48681 1621 aa31.04■■■□□ 2.56
GMPPA-202ENST00000341142 RSF1Q96T23 1441 aaPredicted RBP31.02■■■□□ 2.56
GMPPA-202ENST00000341142 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
GMPPA-202ENST00000341142 CUX2O14529 1486 aa30.83■■■□□ 2.53
GMPPA-202ENST00000341142 CADPSQ9ULU8 1353 aa30.81■■■□□ 2.52
GMPPA-202ENST00000341142 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
GMPPA-202ENST00000341142 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.51
GMPPA-202ENST00000341142 KIF21AQ7Z4S6 1674 aa30.57■■■□□ 2.48
GMPPA-202ENST00000341142 THOC2Q8NI27 1593 aaKnown RBP30.57■■■□□ 2.48
GMPPA-202ENST00000341142 CFTRP13569 1480 aa30.52■■■□□ 2.48
GMPPA-202ENST00000341142 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
GMPPA-202ENST00000341142 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
GMPPA-202ENST00000341142 FANCD2Q9BXW9 1451 aa30.43■■■□□ 2.46
GMPPA-202ENST00000341142 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
GMPPA-202ENST00000341142 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
GMPPA-202ENST00000341142 WDR62O43379 1518 aa30.3■■■□□ 2.44
GMPPA-202ENST00000341142 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
GMPPA-202ENST00000341142 URB2Q14146 1524 aaKnown RBP30.12■■■□□ 2.41
GMPPA-202ENST00000341142 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
GMPPA-202ENST00000341142 TOPBP1Q92547 1522 aa29.89■■■□□ 2.38
GMPPA-202ENST00000341142 ABCC8Q09428 1581 aa29.89■■■□□ 2.38
GMPPA-202ENST00000341142 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
GMPPA-202ENST00000341142 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
GMPPA-202ENST00000341142 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
GMPPA-202ENST00000341142 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
GMPPA-202ENST00000341142 OSCARQ8IYS5 282 aa29.59■■■□□ 2.33
GMPPA-202ENST00000341142 SOGA1O94964 1423 aa29.55■■■□□ 2.32
GMPPA-202ENST00000341142 CUX1P39880 1505 aa29.53■■■□□ 2.32
GMPPA-202ENST00000341142 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
GMPPA-202ENST00000341142 RAD54L2Q9Y4B4 1467 aa29.52■■■□□ 2.32
GMPPA-202ENST00000341142 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.326e-7■■■■■ 42.5
GMPPA-202ENST00000341142 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.31
GMPPA-202ENST00000341142 EIF4G3O43432 1585 aaKnown RBP29.5■■■□□ 2.31
GMPPA-202ENST00000341142 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
GMPPA-202ENST00000341142 FBLN2P98095 1184 aa29.32■■■□□ 2.28
GMPPA-202ENST00000341142 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
GMPPA-202ENST00000341142 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
GMPPA-202ENST00000341142 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
GMPPA-202ENST00000341142 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
GMPPA-202ENST00000341142 SNAPC4Q5SXM2 1469 aa29.21■■■□□ 2.27
GMPPA-202ENST00000341142 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.26
GMPPA-202ENST00000341142 TOP2BQ02880 1626 aa29.17■■■□□ 2.26
GMPPA-202ENST00000341142 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
GMPPA-202ENST00000341142 CHMP7Q8WUX9 453 aaPredicted RBP29.16■■■□□ 2.26
GMPPA-202ENST00000341142 SYNJ1O43426 1573 aa29.15■■■□□ 2.26
GMPPA-202ENST00000341142 MAGI1Q96QZ7 1491 aaPredicted RBP29.15■■■□□ 2.26
GMPPA-202ENST00000341142 CHD1O14646 1710 aa29.14■■■□□ 2.26
GMPPA-202ENST00000341142 BIVM-ERCC5R4GMW8 1640 aa29.13■■■□□ 2.25
GMPPA-202ENST00000341142 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
GMPPA-202ENST00000341142 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
GMPPA-202ENST00000341142 ARHGEF11O15085 1522 aa29.02■■■□□ 2.24
GMPPA-202ENST00000341142 RIMBP3CA6NJZ7 1639 aa29.01■■■□□ 2.24
GMPPA-202ENST00000341142 RIMBP3BA6NNM3 1639 aa29.01■■■□□ 2.24
GMPPA-202ENST00000341142 RIMBP3Q9UFD9 1639 aa29.01■■■□□ 2.24
GMPPA-202ENST00000341142 PBRM1Q86U86 1689 aa29.01■■■□□ 2.23
GMPPA-202ENST00000341142 CYB5RLQ6IPT4 315 aa28.87■■■□□ 2.21
GMPPA-202ENST00000341142 CLASP1Q7Z460 1538 aa28.87■■■□□ 2.21
GMPPA-202ENST00000341142 FHAD1B1AJZ9 1412 aa28.84■■■□□ 2.21
GMPPA-202ENST00000341142 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
GMPPA-202ENST00000341142 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
GMPPA-202ENST00000341142 GRIN2AQ12879 1464 aa28.81■■■□□ 2.2
GMPPA-202ENST00000341142 ARAP1Q96P48 1450 aa28.76■■■□□ 2.2
GMPPA-202ENST00000341142 KIF27Q86VH2 1401 aa28.71■■■□□ 2.19
GMPPA-202ENST00000341142 NUP160Q12769 1436 aa28.7■■■□□ 2.18
GMPPA-202ENST00000341142 CEP170Q5SW79 1584 aa28.64■■■□□ 2.18
GMPPA-202ENST00000341142 IGF1RP08069 1367 aa28.63■■■□□ 2.17
GMPPA-202ENST00000341142 JPH4Q96JJ6 628 aa28.48■■■□□ 2.15
GMPPA-202ENST00000341142 CARMIL1Q5VZK9 1371 aa28.48■■■□□ 2.15
GMPPA-202ENST00000341142 CUL7Q14999 1698 aa28.47■■■□□ 2.15
GMPPA-202ENST00000341142 ERCC6L2Q5T890 1561 aa28.46■■■□□ 2.15
GMPPA-202ENST00000341142 SHROOM2Q13796 1616 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms