RNA–Protein interactions for RNA: ENST00000530542.1

PICALM-213, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-213ENST00000530542 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
PICALM-213ENST00000530542 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
PICALM-213ENST00000530542 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
PICALM-213ENST00000530542 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
PICALM-213ENST00000530542 FOXD1Q16676 465 aa16.69■□□□□ 0.26
PICALM-213ENST00000530542 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
PICALM-213ENST00000530542 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
PICALM-213ENST00000530542 MSH5O43196 834 aa15.77■□□□□ 0.12
PICALM-213ENST00000530542 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
PICALM-213ENST00000530542 ADRA2BP18089 450 aa15.38■□□□□ 0.05
PICALM-213ENST00000530542 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
PICALM-213ENST00000530542 KCNA4P22459 653 aa14.88□□□□□ -0.03
PICALM-213ENST00000530542 PPP4R3CPQ6ZMV5 832 aa14.6□□□□□ -0.07
PICALM-213ENST00000530542 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
PICALM-213ENST00000530542 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
PICALM-213ENST00000530542 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
PICALM-213ENST00000530542 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
PICALM-213ENST00000530542 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
PICALM-213ENST00000530542 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
PICALM-213ENST00000530542 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
PICALM-213ENST00000530542 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
PICALM-213ENST00000530542 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
PICALM-213ENST00000530542 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
PICALM-213ENST00000530542 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
PICALM-213ENST00000530542 ZBTB22O15209 634 aa13.69□□□□□ -0.22
PICALM-213ENST00000530542 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
PICALM-213ENST00000530542 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
PICALM-213ENST00000530542 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
PICALM-213ENST00000530542 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
PICALM-213ENST00000530542 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
PICALM-213ENST00000530542 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
PICALM-213ENST00000530542 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
PICALM-213ENST00000530542 MYCNP04198 464 aaPredicted RBP13.09□□□□□ -0.31
PICALM-213ENST00000530542 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
PICALM-213ENST00000530542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■□□□□ 9.9
PICALM-213ENST00000530542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
PICALM-213ENST00000530542 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
PICALM-213ENST00000530542 FKBP8Q14318 412 aa12.71□□□□□ -0.37
PICALM-213ENST00000530542 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
PICALM-213ENST00000530542 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
PICALM-213ENST00000530542 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
PICALM-213ENST00000530542 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
PICALM-213ENST00000530542 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
PICALM-213ENST00000530542 POTEHQ6S545 545 aa12.51□□□□□ -0.41
PICALM-213ENST00000530542 CAPN15O75808 1086 aa12.5□□□□□ -0.41
PICALM-213ENST00000530542 APLP2Q06481 763 aa12.48□□□□□ -0.41
PICALM-213ENST00000530542 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
PICALM-213ENST00000530542 DSG3P32926 999 aa12.43□□□□□ -0.42
PICALM-213ENST00000530542 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
PICALM-213ENST00000530542 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
PICALM-213ENST00000530542 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
PICALM-213ENST00000530542 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
PICALM-213ENST00000530542 ABCB7O75027 752 aa12.17□□□□□ -0.46
PICALM-213ENST00000530542 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
PICALM-213ENST00000530542 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
PICALM-213ENST00000530542 FBLN2P98095 1184 aa12.13□□□□□ -0.47
PICALM-213ENST00000530542 POLA2Q14181 598 aa12.08□□□□□ -0.48
PICALM-213ENST00000530542 PROM2Q8N271 834 aa12.08□□□□□ -0.48
PICALM-213ENST00000530542 ZBTB12Q9Y330 459 aaPredicted RBP11.96□□□□□ -0.49
PICALM-213ENST00000530542 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
PICALM-213ENST00000530542 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
PICALM-213ENST00000530542 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
PICALM-213ENST00000530542 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
PICALM-213ENST00000530542 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
PICALM-213ENST00000530542 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
PICALM-213ENST00000530542 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
PICALM-213ENST00000530542 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
PICALM-213ENST00000530542 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
PICALM-213ENST00000530542 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
PICALM-213ENST00000530542 PKD2Q13563 968 aa11.65□□□□□ -0.54
PICALM-213ENST00000530542 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
PICALM-213ENST00000530542 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
PICALM-213ENST00000530542 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
PICALM-213ENST00000530542 SPOCK2Q92563 424 aa11.6□□□□□ -0.55
PICALM-213ENST00000530542 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
PICALM-213ENST00000530542 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
PICALM-213ENST00000530542 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
PICALM-213ENST00000530542 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
PICALM-213ENST00000530542 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
PICALM-213ENST00000530542 MIER1Q8N108 512 aa11.48□□□□□ -0.57
PICALM-213ENST00000530542 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
PICALM-213ENST00000530542 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
PICALM-213ENST00000530542 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
PICALM-213ENST00000530542 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
PICALM-213ENST00000530542 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
PICALM-213ENST00000530542 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
PICALM-213ENST00000530542 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
PICALM-213ENST00000530542 HAX1O00165 279 aa11.39□□□□□ -0.59
PICALM-213ENST00000530542 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
PICALM-213ENST00000530542 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
PICALM-213ENST00000530542 RGL2O15211 777 aa11.33□□□□□ -0.6
PICALM-213ENST00000530542 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
PICALM-213ENST00000530542 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
PICALM-213ENST00000530542 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
PICALM-213ENST00000530542 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
PICALM-213ENST00000530542 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
PICALM-213ENST00000530542 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
PICALM-213ENST00000530542 BCANQ96GW7 911 aa11.25□□□□□ -0.61
PICALM-213ENST00000530542 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
PICALM-213ENST00000530542 SPRYD3Q8NCJ5 442 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms