Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.377e-11■□□□□ 8.3
HNRNPUQ00839 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.097e-8■□□□□ 8.3
HNRNPUQ00839 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.447e-8■□□□□ 8.3
HNRNPUQ00839 ARF1-209ENST00000478424 1059 ntTSL 230.78■■■□□ 2.521e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-208ENST00000478336 930 ntTSL 230.74■■■□□ 2.511e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.421e-6■□□□□ 8.3
HNRNPUQ00839 ATP2A2-203ENST00000377685 5702 ntTSL 529.42■■■□□ 2.31e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-206ENST00000473949 578 ntTSL 525.55■■□□□ 1.681e-6■□□□□ 8.3
HNRNPUQ00839 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.611e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.431e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-207ENST00000477451 789 ntTSL 522.87■■□□□ 1.251e-6■□□□□ 8.3
HNRNPUQ00839 FERMT3-207ENST00000544997 1006 ntTSL 321.13■□□□□ 0.971e-6■□□□□ 8.3
HNRNPUQ00839 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.911e-6■□□□□ 8.3
HNRNPUQ00839 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.911e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-203ENST00000470558 820 ntTSL 220.09■□□□□ 0.811e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-212ENST00000497165 675 ntTSL 320.09■□□□□ 0.811e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-202ENST00000469235 678 ntTSL 319.83■□□□□ 0.771e-6■□□□□ 8.3
HNRNPUQ00839 FERMT3-205ENST00000541252 714 ntTSL 319.76■□□□□ 0.751e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-210ENST00000482962 597 ntTSL 319.22■□□□□ 0.671e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-204ENST00000470670 712 ntTSL 318.55■□□□□ 0.561e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-205ENST00000473546 291 ntTSL 216.79■□□□□ 0.281e-6■□□□□ 8.3
HNRNPUQ00839 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.151e-6■□□□□ 8.3
HNRNPUQ00839 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)11.08□□□□□ -0.641e-6■□□□□ 8.3
HNRNPUQ00839 ATP2A2-212ENST00000553144 264 ntTSL 1 (best)4.85□□□□□ -1.631e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-207ENST00000546842 1258 ntTSL 235.22■■■■□ 3.233e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-219ENST00000562373 838 ntTSL 326.7■■□□□ 1.863e-6■□□□□ 8.3
HNRNPUQ00839 LSP1-208ENST00000429923 582 ntTSL 325.81■■□□□ 1.723e-9■□□□□ 8.3
HNRNPUQ00839 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.643e-6■□□□□ 8.3
HNRNPUQ00839 PBXIP1-204ENST00000490230 853 ntTSL 524.29■■□□□ 1.483e-6■□□□□ 8.3
HNRNPUQ00839 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.263e-9■□□□□ 8.3
HNRNPUQ00839 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.183e-9■□□□□ 8.3
HNRNPUQ00839 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.143e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.143e-6■□□□□ 8.3
HNRNPUQ00839 LSP1-205ENST00000417766 887 ntAPPRIS ALT2 TSL 521.83■■□□□ 1.093e-9■□□□□ 8.3
HNRNPUQ00839 LSP1-214ENST00000472974 903 ntTSL 521.66■■□□□ 1.063e-9■□□□□ 8.3
HNRNPUQ00839 LSP1-212ENST00000457279 887 ntAPPRIS ALT2 TSL 521.24■□□□□ 0.993e-9■□□□□ 8.3
HNRNPUQ00839 PBXIP1-206ENST00000498553 777 ntTSL 520.83■□□□□ 0.933e-6■□□□□ 8.3
HNRNPUQ00839 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.853e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.31■□□□□ 0.843e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-205ENST00000478250 1820 ntTSL 1 (best)20.09■□□□□ 0.813e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC19.81■□□□□ 0.763e-6■□□□□ 8.3
HNRNPUQ00839 LSP1-206ENST00000418975 581 ntTSL 319.58■□□□□ 0.723e-9■□□□□ 8.3
HNRNPUQ00839 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.663e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-212ENST00000549102 600 ntTSL 1 (best)19.07■□□□□ 0.643e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.53e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.6■□□□□ 0.253e-6■□□□□ 8.3
HNRNPUQ00839 PBXIP1-205ENST00000493133 707 ntTSL 316.13■□□□□ 0.173e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-210ENST00000548733 535 ntTSL 315.92■□□□□ 0.143e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-206ENST00000545748 3511 ntTSL 2 BASIC15.64■□□□□ 0.093e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-217ENST00000550763 574 ntTSL 413.55□□□□□ -0.243e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-211ENST00000548977 548 ntTSL 211.89□□□□□ -0.513e-6■□□□□ 8.3
HNRNPUQ00839 NR4A1-208ENST00000547206 570 ntTSL 411.28□□□□□ -0.63e-6■□□□□ 8.3
HNRNPUQ00839 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.991e-7■□□□□ 8.3
HNRNPUQ00839 AC132938.6-201ENST00000623828 1655 ntBASIC24.21■■□□□ 1.471e-40■□□□□ 8.3
HNRNPUQ00839 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.9■■■□□ 2.76e-6■□□□□ 8.3
HNRNPUQ00839 HMGA2-208ENST00000537429 1527 ntTSL 1 (best)31.9■■■□□ 2.76e-6■□□□□ 8.3
HNRNPUQ00839 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.01■■■□□ 2.556e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.43■■■□□ 2.462e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.442e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30.13■■■□□ 2.412e-8■□□□□ 8.3
HNRNPUQ00839 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.3■■■□□ 2.286e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.21■■■□□ 2.272e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-220ENST00000598108 1118 ntTSL 329.08■■■□□ 2.252e-8■□□□□ 8.3
HNRNPUQ00839 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.44■■■□□ 2.146e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.04■■□□□ 1.762e-8■□□□□ 8.3
HNRNPUQ00839 RRBP1-209ENST00000495501 832 ntTSL 525.28■■□□□ 1.646e-6■□□□□ 8.3
HNRNPUQ00839 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.11■■□□□ 1.616e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.492e-8■□□□□ 8.3
HNRNPUQ00839 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.426e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-205ENST00000593337 633 ntTSL 323.74■■□□□ 1.392e-8■□□□□ 8.3
HNRNPUQ00839 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)23.54■■□□□ 1.366e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.36■■□□□ 1.332e-8■□□□□ 8.3
HNRNPUQ00839 FDPS-212ENST00000487002 2017 ntTSL 223.35■■□□□ 1.336e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-216ENST00000597180 301 ntTSL 523.26■■□□□ 1.312e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-209ENST00000595034 739 ntTSL 322.88■■□□□ 1.252e-8■□□□□ 8.3
HNRNPUQ00839 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.82■■□□□ 1.246e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.35■■□□□ 1.172e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-230ENST00000601809 768 ntTSL 222.2■■□□□ 1.142e-8■□□□□ 8.3
HNRNPUQ00839 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)22.05■■□□□ 1.126e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-208ENST00000594387 800 ntTSL 321.9■■□□□ 1.12e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-219ENST00000597636 2874 ntTSL 521.59■■□□□ 1.052e-8■□□□□ 8.3
HNRNPUQ00839 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.036e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.982e-8■□□□□ 8.3
HNRNPUQ00839 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.8■□□□□ 0.926e-6■□□□□ 8.3
HNRNPUQ00839 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.76■□□□□ 0.916e-6■□□□□ 8.3
HNRNPUQ00839 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.866e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-226ENST00000600453 700 ntTSL 319.57■□□□□ 0.722e-8■□□□□ 8.3
HNRNPUQ00839 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.76e-6■□□□□ 8.3
HNRNPUQ00839 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.646e-6■□□□□ 8.3
HNRNPUQ00839 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC18.63■□□□□ 0.576e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-229ENST00000601373 680 ntTSL 218.38■□□□□ 0.532e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.01■□□□□ 0.472e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18■□□□□ 0.472e-8■□□□□ 8.3
HNRNPUQ00839 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.436e-6■□□□□ 8.3
HNRNPUQ00839 PSMB5-206ENST00000555895 444 ntTSL 317.67■□□□□ 0.426e-6■□□□□ 8.3
HNRNPUQ00839 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.412e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.6■□□□□ 0.412e-8■□□□□ 8.3
HNRNPUQ00839 IRF3-212ENST00000596756 931 ntTSL 516.67■□□□□ 0.262e-8■□□□□ 8.3
HNRNPUQ00839 NFIA-210ENST00000479364 1010 ntTSL 516.55■□□□□ 0.246e-6■□□□□ 8.3
HNRNPUQ00839 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.226e-6■□□□□ 8.3
Retrieved 100 of 2,288 protein–RNA pairs in 17.4 ms