RNA–Protein interactions for RNA: ENST00000540557.1

AL138752.2-201, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AL138752.2, Length 2,591 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL138752.2-201ENST00000540557 NISCHQ9Y2I1 1504 aa34.24■■■■□ 3.07
AL138752.2-201ENST00000540557 PELP1Q8IZL8 1130 aaKnown RBP30.71■■■□□ 2.51
AL138752.2-201ENST00000540557 MYT1Q01538 1121 aa29.96■■■□□ 2.39
AL138752.2-201ENST00000540557 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
AL138752.2-201ENST00000540557 HRCP23327 699 aa29.47■■■□□ 2.31
AL138752.2-201ENST00000540557 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
AL138752.2-201ENST00000540557 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.23
AL138752.2-201ENST00000540557 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
AL138752.2-201ENST00000540557 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
AL138752.2-201ENST00000540557 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
AL138752.2-201ENST00000540557 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
AL138752.2-201ENST00000540557 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
AL138752.2-201ENST00000540557 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
AL138752.2-201ENST00000540557 PCGF6Q9BYE7 350 aa28.62■■■□□ 2.17
AL138752.2-201ENST00000540557 TTBK1Q5TCY1 1321 aaPredicted RBP28.62■■■□□ 2.17
AL138752.2-201ENST00000540557 PRKCSHP14314 528 aaPredicted RBP28.25■■■□□ 2.11
AL138752.2-201ENST00000540557 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
AL138752.2-201ENST00000540557 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
AL138752.2-201ENST00000540557 BCL11AQ9H165 835 aa28.02■■■□□ 2.08
AL138752.2-201ENST00000540557 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
AL138752.2-201ENST00000540557 TRIM26Q12899 539 aaPredicted RBP27.74■■■□□ 2.03
AL138752.2-201ENST00000540557 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
AL138752.2-201ENST00000540557 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
AL138752.2-201ENST00000540557 GTF3C3Q9Y5Q9 886 aa27.44■■□□□ 1.98
AL138752.2-201ENST00000540557 CENPBP07199 599 aaPredicted RBP27.37■■□□□ 1.97
AL138752.2-201ENST00000540557 ERICH6Q7L0X2 663 aa27.34■■□□□ 1.97
AL138752.2-201ENST00000540557 ZEB1P37275 1124 aaPredicted RBP27.33■■□□□ 1.97
AL138752.2-201ENST00000540557 ABCC9O60706 1549 aa27.32■■□□□ 1.96
AL138752.2-201ENST00000540557 APLP2Q06481 763 aa27.32■■□□□ 1.96
AL138752.2-201ENST00000540557 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
AL138752.2-201ENST00000540557 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
AL138752.2-201ENST00000540557 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
AL138752.2-201ENST00000540557 EHMT2Q96KQ7 1210 aa27.04■■□□□ 1.92
AL138752.2-201ENST00000540557 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
AL138752.2-201ENST00000540557 ANP32EQ9BTT0 268 aa26.88■■□□□ 1.89
AL138752.2-201ENST00000540557 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
AL138752.2-201ENST00000540557 NACADO15069 1562 aa26.76■■□□□ 1.87
AL138752.2-201ENST00000540557 CSRNP3Q8WYN3 585 aa26.72■■□□□ 1.87
AL138752.2-201ENST00000540557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.68■■□□□ 1.86
AL138752.2-201ENST00000540557 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
AL138752.2-201ENST00000540557 CCER1Q8TC90 406 aaPredicted RBP26.57■■□□□ 1.84
AL138752.2-201ENST00000540557 WIZO95785 1651 aa26.53■■□□□ 1.84
AL138752.2-201ENST00000540557 DIEXFQ68CQ4 756 aaKnown RBP26.42■■□□□ 1.82
AL138752.2-201ENST00000540557 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
AL138752.2-201ENST00000540557 SLC24A1O60721 1099 aa26.2■■□□□ 1.78
AL138752.2-201ENST00000540557 ANO8Q9HCE9 1232 aaPredicted RBP26.14■■□□□ 1.77
AL138752.2-201ENST00000540557 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
AL138752.2-201ENST00000540557 TSHZ2Q9NRE2 1034 aa26.08■■□□□ 1.77
AL138752.2-201ENST00000540557 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
AL138752.2-201ENST00000540557 ABCC8Q09428 1581 aa26.05■■□□□ 1.76
AL138752.2-201ENST00000540557 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
AL138752.2-201ENST00000540557 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
AL138752.2-201ENST00000540557 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
AL138752.2-201ENST00000540557 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
AL138752.2-201ENST00000540557 CEP162Q5TB80 1403 aa26■■□□□ 1.75
AL138752.2-201ENST00000540557 ZNF316A6NFI3 1004 aaPredicted RBP25.99■■□□□ 1.75
AL138752.2-201ENST00000540557 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
AL138752.2-201ENST00000540557 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
AL138752.2-201ENST00000540557 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
AL138752.2-201ENST00000540557 SOGA1O94964 1423 aa25.86■■□□□ 1.73
AL138752.2-201ENST00000540557 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
AL138752.2-201ENST00000540557 MIER1Q8N108 512 aa25.82■■□□□ 1.72
AL138752.2-201ENST00000540557 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
AL138752.2-201ENST00000540557 UBE2Q2Q8WVN8 375 aa25.78■■□□□ 1.72
AL138752.2-201ENST00000540557 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
AL138752.2-201ENST00000540557 EIF5BO60841 1220 aaKnown RBP25.74■■□□□ 1.71
AL138752.2-201ENST00000540557 SUPT16HQ9Y5B9 1047 aaKnown RBP25.72■■□□□ 1.71
AL138752.2-201ENST00000540557 HNRNPUL2Q1KMD3 747 aaKnown RBP25.69■■□□□ 1.7
AL138752.2-201ENST00000540557 EEA1Q15075 1411 aa25.65■■□□□ 1.7
AL138752.2-201ENST00000540557 SALL2Q9Y467 1007 aaPredicted RBP25.63■■□□□ 1.69
AL138752.2-201ENST00000540557 BICRAQ9NZM4 1560 aa25.59■■□□□ 1.69
AL138752.2-201ENST00000540557 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
AL138752.2-201ENST00000540557 CCDC136Q96JN2 1154 aa25.54■■□□□ 1.68
AL138752.2-201ENST00000540557 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
AL138752.2-201ENST00000540557 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
AL138752.2-201ENST00000540557 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
AL138752.2-201ENST00000540557 PLEKHG5O94827 1062 aa25.42■■□□□ 1.66
AL138752.2-201ENST00000540557 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
AL138752.2-201ENST00000540557 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
AL138752.2-201ENST00000540557 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
AL138752.2-201ENST00000540557 CLIP1P30622 1438 aa25.36■■□□□ 1.65
AL138752.2-201ENST00000540557 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
AL138752.2-201ENST00000540557 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
AL138752.2-201ENST00000540557 MSH5O43196 834 aa25.3■■□□□ 1.64
AL138752.2-201ENST00000540557 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
AL138752.2-201ENST00000540557 KIF21BO75037 1637 aa25.27■■□□□ 1.64
AL138752.2-201ENST00000540557 RBM19Q9Y4C8 960 aaKnown RBP25.27■■□□□ 1.64
AL138752.2-201ENST00000540557 DEKP35659 375 aaKnown RBP25.25■■□□□ 1.63
AL138752.2-201ENST00000540557 PKNOX2Q96KN3 472 aa25.21■■□□□ 1.63
AL138752.2-201ENST00000540557 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.62
AL138752.2-201ENST00000540557 ERICH6BQ5W0A0 696 aa25.17■■□□□ 1.62
AL138752.2-201ENST00000540557 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.14■■□□□ 1.61
AL138752.2-201ENST00000540557 DHX57Q6P158 1386 aaKnown RBP25.14■■□□□ 1.61
AL138752.2-201ENST00000540557 MYT1LQ9UL68 1186 aa25.08■■□□□ 1.61
AL138752.2-201ENST00000540557 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
AL138752.2-201ENST00000540557 PODXL2Q9NZ53 605 aa25.03■■□□□ 1.6
AL138752.2-201ENST00000540557 BCANQ96GW7 911 aa24.96■■□□□ 1.59
AL138752.2-201ENST00000540557 KANK4Q5T7N3 995 aaPredicted RBP24.95■■□□□ 1.58
AL138752.2-201ENST00000540557 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
AL138752.2-201ENST00000540557 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms