RNA–Protein interactions for RNA: ENST00000548733.1

NR4A1-210, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 535 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-210ENST00000548733 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
NR4A1-210ENST00000548733 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
NR4A1-210ENST00000548733 ABCC9O60706 1549 aa25.94■■□□□ 1.74
NR4A1-210ENST00000548733 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
NR4A1-210ENST00000548733 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
NR4A1-210ENST00000548733 NACADO15069 1562 aa25.03■■□□□ 1.6
NR4A1-210ENST00000548733 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
NR4A1-210ENST00000548733 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
NR4A1-210ENST00000548733 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
NR4A1-210ENST00000548733 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
NR4A1-210ENST00000548733 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
NR4A1-210ENST00000548733 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
NR4A1-210ENST00000548733 PABPN1Q86U42 306 aaKnown RBP eCLIP24.18■■□□□ 1.46
NR4A1-210ENST00000548733 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
NR4A1-210ENST00000548733 EIF4G1Q04637 1599 aaKnown RBP23.62■■□□□ 1.37
NR4A1-210ENST00000548733 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
NR4A1-210ENST00000548733 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
NR4A1-210ENST00000548733 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
NR4A1-210ENST00000548733 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
NR4A1-210ENST00000548733 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
NR4A1-210ENST00000548733 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
NR4A1-210ENST00000548733 ATAD2BQ9ULI0 1458 aa23.09■■□□□ 1.29
NR4A1-210ENST00000548733 MROH2BQ7Z745 1585 aa23.09■■□□□ 1.29
NR4A1-210ENST00000548733 PEG3Q9GZU2 1588 aa23.05■■□□□ 1.28
NR4A1-210ENST00000548733 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
NR4A1-210ENST00000548733 HMGXB3Q12766 1538 aa23.02■■□□□ 1.28
NR4A1-210ENST00000548733 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
NR4A1-210ENST00000548733 WIZO95785 1651 aa22.84■■□□□ 1.25
NR4A1-210ENST00000548733 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.25
NR4A1-210ENST00000548733 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
NR4A1-210ENST00000548733 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
NR4A1-210ENST00000548733 NESP48681 1621 aa22.46■■□□□ 1.19
NR4A1-210ENST00000548733 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
NR4A1-210ENST00000548733 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
NR4A1-210ENST00000548733 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.16
NR4A1-210ENST00000548733 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
NR4A1-210ENST00000548733 CFTRP13569 1480 aa22.28■■□□□ 1.16
NR4A1-210ENST00000548733 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
NR4A1-210ENST00000548733 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
NR4A1-210ENST00000548733 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
NR4A1-210ENST00000548733 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
NR4A1-210ENST00000548733 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
NR4A1-210ENST00000548733 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
NR4A1-210ENST00000548733 CUX2O14529 1486 aa22.14■■□□□ 1.13
NR4A1-210ENST00000548733 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
NR4A1-210ENST00000548733 WDR62O43379 1518 aa22.03■■□□□ 1.12
NR4A1-210ENST00000548733 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
NR4A1-210ENST00000548733 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
NR4A1-210ENST00000548733 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
NR4A1-210ENST00000548733 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
NR4A1-210ENST00000548733 CUX1P39880 1505 aa21.67■■□□□ 1.06
NR4A1-210ENST00000548733 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
NR4A1-210ENST00000548733 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
NR4A1-210ENST00000548733 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
NR4A1-210ENST00000548733 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
NR4A1-210ENST00000548733 TARBP1Q13395 1621 aaKnown RBP21.56■■□□□ 1.04
NR4A1-210ENST00000548733 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
NR4A1-210ENST00000548733 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
NR4A1-210ENST00000548733 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
NR4A1-210ENST00000548733 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
NR4A1-210ENST00000548733 EIF4G3O43432 1585 aaKnown RBP21.52■■□□□ 1.04
NR4A1-210ENST00000548733 SOGA1O94964 1423 aa21.5■■□□□ 1.03
NR4A1-210ENST00000548733 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
NR4A1-210ENST00000548733 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
NR4A1-210ENST00000548733 ABCA10Q8WWZ4 1543 aa21.39■■□□□ 1.02
NR4A1-210ENST00000548733 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.01
NR4A1-210ENST00000548733 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
NR4A1-210ENST00000548733 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1.01
NR4A1-210ENST00000548733 GRIN2BQ13224 1484 aa21.29■■□□□ 1
NR4A1-210ENST00000548733 PBRM1Q86U86 1689 aa21.28■■□□□ 1
NR4A1-210ENST00000548733 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
NR4A1-210ENST00000548733 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
NR4A1-210ENST00000548733 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
NR4A1-210ENST00000548733 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
NR4A1-210ENST00000548733 CHD1O14646 1710 aa21.19■□□□□ 0.98
NR4A1-210ENST00000548733 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
NR4A1-210ENST00000548733 ADAMTS12P58397 1594 aa21.14■□□□□ 0.98
NR4A1-210ENST00000548733 SYNJ2O15056 1496 aa21.14■□□□□ 0.98
NR4A1-210ENST00000548733 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
NR4A1-210ENST00000548733 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
NR4A1-210ENST00000548733 FBLN2P98095 1184 aa21.09■□□□□ 0.97
NR4A1-210ENST00000548733 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
NR4A1-210ENST00000548733 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
NR4A1-210ENST00000548733 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
NR4A1-210ENST00000548733 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
NR4A1-210ENST00000548733 CUL7Q14999 1698 aa21.02■□□□□ 0.95
NR4A1-210ENST00000548733 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
NR4A1-210ENST00000548733 IGF1RP08069 1367 aa20.94■□□□□ 0.94
NR4A1-210ENST00000548733 NUP160Q12769 1436 aa20.92■□□□□ 0.94
NR4A1-210ENST00000548733 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
NR4A1-210ENST00000548733 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
NR4A1-210ENST00000548733 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
NR4A1-210ENST00000548733 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
NR4A1-210ENST00000548733 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
NR4A1-210ENST00000548733 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
NR4A1-210ENST00000548733 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
NR4A1-210ENST00000548733 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
NR4A1-210ENST00000548733 EEA1Q15075 1411 aa20.79■□□□□ 0.92
NR4A1-210ENST00000548733 RAPGEF2Q9Y4G8 1499 aa20.78■□□□□ 0.92
NR4A1-210ENST00000548733 SHROOM2Q13796 1616 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms