RNA–Protein interactions for RNA: ENST00000546842.5

NR4A1-207, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-207ENST00000546842 NISCHQ9Y2I1 1504 aa72.41■■■■■ 9.18
NR4A1-207ENST00000546842 ABCC9O60706 1549 aa65.05■■■■■ 8
NR4A1-207ENST00000546842 CCDC180Q9P1Z9 1646 aa65.01■■■■■ 8
NR4A1-207ENST00000546842 RB1CC1Q8TDY2 1594 aa61.89■■■■■ 7.5
NR4A1-207ENST00000546842 NACADO15069 1562 aa61.45■■■■■ 7.43
NR4A1-207ENST00000546842 DCAF8L2P0C7V8 631 aa61.09■■■■■ 7.37
NR4A1-207ENST00000546842 DNAJC5BQ9UF47 199 aa61.05■■■■■ 7.36
NR4A1-207ENST00000546842 MYO15BQ96JP2 1530 aa60.58■■■■■ 7.29
NR4A1-207ENST00000546842 PABPN1Q86U42 306 aaKnown RBP eCLIP60.54■■■■■ 7.28
NR4A1-207ENST00000546842 UNC13AQ9UPW8 1703 aa60.53■■■■■ 7.28
NR4A1-207ENST00000546842 BICRAQ9NZM4 1560 aa60.12■■■■■ 7.21
NR4A1-207ENST00000546842 ZCCHC6Q5VYS8 1495 aaKnown RBP60.02■■■■■ 7.2
NR4A1-207ENST00000546842 DCAF1Q9Y4B6 1507 aa59.8■■■■■ 7.16
NR4A1-207ENST00000546842 SHROOM4Q9ULL8 1493 aa59.27■■■■■ 7.08
NR4A1-207ENST00000546842 SCRIBQ14160 1630 aa59.25■■■■■ 7.08
NR4A1-207ENST00000546842 CC2D2AQ9P2K1 1620 aa58.77■■■■■ 7
NR4A1-207ENST00000546842 EIF4G1Q04637 1599 aaKnown RBP58.63■■■■■ 6.98
NR4A1-207ENST00000546842 CECR2Q9BXF3 1484 aa58.6■■■■■ 6.97
NR4A1-207ENST00000546842 NCAPD3P42695 1498 aa56.72■■■■■ 6.67
NR4A1-207ENST00000546842 ATAD2BQ9ULI0 1458 aa56.57■■■■■ 6.65
NR4A1-207ENST00000546842 SMARCA4P51532 1647 aa56.52■■■■■ 6.64
NR4A1-207ENST00000546842 SMARCA2P51531 1590 aa56.4■■■■■ 6.62
NR4A1-207ENST00000546842 HMGXB3Q12766 1538 aa56.33■■■■■ 6.61
NR4A1-207ENST00000546842 BAZ1AQ9NRL2 1556 aaPredicted RBP56.21■■■■■ 6.59
NR4A1-207ENST00000546842 ERCC6Q03468 1493 aa56.15■■■■■ 6.58
NR4A1-207ENST00000546842 CUX2O14529 1486 aa56.07■■■■■ 6.57
NR4A1-207ENST00000546842 DNAJC5Q9H3Z4 198 aa56.06■■■■■ 6.56
NR4A1-207ENST00000546842 BAZ1BQ9UIG0 1483 aaKnown RBP56.01■■■■■ 6.56
NR4A1-207ENST00000546842 PEG3Q9GZU2 1588 aa55.95■■■■■ 6.55
NR4A1-207ENST00000546842 NESP48681 1621 aa55.89■■■■■ 6.54
NR4A1-207ENST00000546842 MROH2BQ7Z745 1585 aa55.82■■■■■ 6.53
NR4A1-207ENST00000546842 LAMC3Q9Y6N6 1575 aa55.46■■■■■ 6.47
NR4A1-207ENST00000546842 THOC2Q8NI27 1593 aaKnown RBP55.34■■■■■ 6.45
NR4A1-207ENST00000546842 KIF21AQ7Z4S6 1674 aa55.17■■■■■ 6.42
NR4A1-207ENST00000546842 WIZO95785 1651 aa55.15■■■■■ 6.42
NR4A1-207ENST00000546842 PDS5BQ9NTI5 1447 aa55.12■■■■■ 6.42
NR4A1-207ENST00000546842 CADPSQ9ULU8 1353 aa55■■■■■ 6.39
NR4A1-207ENST00000546842 MRC2Q9UBG0 1479 aa54.68■■■■■ 6.34
NR4A1-207ENST00000546842 RSF1Q96T23 1441 aaPredicted RBP54.63■■■■■ 6.34
NR4A1-207ENST00000546842 WDR62O43379 1518 aa54.56■■■■■ 6.32
NR4A1-207ENST00000546842 CEP164Q9UPV0 1460 aa54.45■■■■■ 6.31
NR4A1-207ENST00000546842 TOP2AP11388 1531 aaKnown RBP54.44■■■■■ 6.31
NR4A1-207ENST00000546842 FANCD2Q9BXW9 1451 aa54.4■■■■■ 6.3
NR4A1-207ENST00000546842 CFTRP13569 1480 aa54.38■■■■■ 6.3
NR4A1-207ENST00000546842 URB2Q14146 1524 aaKnown RBP53.97■■■■■ 6.23
NR4A1-207ENST00000546842 PRDM2Q13029 1718 aa53.86■■■■■ 6.21
NR4A1-207ENST00000546842 CCDC88BA6NC98 1476 aa53.82■■■■■ 6.21
NR4A1-207ENST00000546842 TRIM41Q8WV44 630 aa53.6■■■■■ 6.17
NR4A1-207ENST00000546842 OSCARQ8IYS5 282 aa53.46■■■■■ 6.15
NR4A1-207ENST00000546842 TOPBP1Q92547 1522 aa53.37■■■■■ 6.13
NR4A1-207ENST00000546842 IFT140Q96RY7 1462 aa53.36■■■■■ 6.13
NR4A1-207ENST00000546842 ZNF608Q9ULD9 1512 aaPredicted RBP53.31■■■■■ 6.12
NR4A1-207ENST00000546842 ABCC8Q09428 1581 aa53.2■■■■■ 6.11
NR4A1-207ENST00000546842 DNMBPQ6XZF7 1577 aa53.17■■■■■ 6.1
NR4A1-207ENST00000546842 EIF4G3O43432 1585 aaKnown RBP53.02■■■■■ 6.08
NR4A1-207ENST00000546842 TARBP1Q13395 1621 aaKnown RBP52.91■■■■■ 6.06
NR4A1-207ENST00000546842 RIMBP3CA6NJZ7 1639 aa52.84■■■■■ 6.05
NR4A1-207ENST00000546842 RIMBP3BA6NNM3 1639 aa52.84■■■■■ 6.05
NR4A1-207ENST00000546842 RIMBP3Q9UFD9 1639 aa52.84■■■■■ 6.05
NR4A1-207ENST00000546842 POLA1P09884 1462 aaPredicted RBP52.82■■■■■ 6.05
NR4A1-207ENST00000546842 AQRO60306 1485 aaKnown RBP eCLIP52.81■■■■■ 6.04
NR4A1-207ENST00000546842 ARHGEF11O15085 1522 aa52.66■■■■■ 6.02
NR4A1-207ENST00000546842 RAD54L2Q9Y4B4 1467 aa52.63■■■■■ 6.02
NR4A1-207ENST00000546842 CHD1O14646 1710 aa52.63■■■■■ 6.02
NR4A1-207ENST00000546842 SOGA1O94964 1423 aa52.55■■■■■ 6
NR4A1-207ENST00000546842 FGD5Q6ZNL6 1462 aa52.49■■■■■ 5.99
NR4A1-207ENST00000546842 TDRD9Q8NDG6 1382 aaKnown RBP52.47■■■■■ 5.99
NR4A1-207ENST00000546842 CUX1P39880 1505 aa52.45■■■■■ 5.99
NR4A1-207ENST00000546842 FBLN2P98095 1184 aa52.44■■■■■ 5.99
NR4A1-207ENST00000546842 WDR97A6NE52 1622 aa52.34■■■■■ 5.97
NR4A1-207ENST00000546842 SNAPC4Q5SXM2 1469 aa52.28■■■■■ 5.96
NR4A1-207ENST00000546842 CYB5RLQ6IPT4 315 aa52.23■■■■■ 5.95
NR4A1-207ENST00000546842 SUPT5HO00267 1087 aaKnown RBP52.16■■■■■ 5.94
NR4A1-207ENST00000546842 ARAP1Q96P48 1450 aa52.16■■■■■ 5.94
NR4A1-207ENST00000546842 MAGI1Q96QZ7 1491 aaPredicted RBP52.12■■■■■ 5.93
NR4A1-207ENST00000546842 GRIN2BQ13224 1484 aa52.12■■■■■ 5.93
NR4A1-207ENST00000546842 CHMP7Q8WUX9 453 aaPredicted RBP52.04■■■■■ 5.92
NR4A1-207ENST00000546842 CLASP1Q7Z460 1538 aa52.03■■■■■ 5.92
NR4A1-207ENST00000546842 SYNJ1O43426 1573 aa51.97■■■■■ 5.91
NR4A1-207ENST00000546842 SYNJ2O15056 1496 aa51.95■■■■■ 5.91
NR4A1-207ENST00000546842 PBRM1Q86U86 1689 aa51.94■■■■■ 5.9
NR4A1-207ENST00000546842 GAPVD1Q14C86 1478 aa51.92■■■■■ 5.9
NR4A1-207ENST00000546842 ABCA10Q8WWZ4 1543 aa51.89■■■■■ 5.9
NR4A1-207ENST00000546842 ABCA5Q8WWZ7 1642 aa51.83■■■■■ 5.89
NR4A1-207ENST00000546842 TRHP20396 242 aaPredicted RBP51.65■■■■■ 5.86
NR4A1-207ENST00000546842 WRNQ14191 1432 aaPredicted RBP eCLIP51.64■■■■■ 5.86
NR4A1-207ENST00000546842 TOP2BQ02880 1626 aa51.59■■■■■ 5.85
NR4A1-207ENST00000546842 BIVM-ERCC5R4GMW8 1640 aa51.59■■■■■ 5.85
NR4A1-207ENST00000546842 GRIN2AQ12879 1464 aa51.46■■■■■ 5.83
NR4A1-207ENST00000546842 ADAMTS12P58397 1594 aa51.45■■■■■ 5.83
NR4A1-207ENST00000546842 CEP170Q5SW79 1584 aa51.29■■■■■ 5.8
NR4A1-207ENST00000546842 NUP160Q12769 1436 aa51.29■■■■■ 5.8
NR4A1-207ENST00000546842 FHAD1B1AJZ9 1412 aa51.26■■■■■ 5.8
NR4A1-207ENST00000546842 ERCC6L2Q5T890 1561 aa51.23■■■■■ 5.79
NR4A1-207ENST00000546842 ERICH3Q5RHP9 1530 aa51.23■■■■■ 5.79
NR4A1-207ENST00000546842 SHROOM2Q13796 1616 aa51.08■■■■■ 5.77
NR4A1-207ENST00000546842 PRG4Q92954 1404 aaPredicted RBP50.79■■■■■ 5.72
NR4A1-207ENST00000546842 RUSC2Q8N2Y8 1516 aa50.72■■■■■ 5.71
NR4A1-207ENST00000546842 JPH4Q96JJ6 628 aa50.72■■■■■ 5.71
NR4A1-207ENST00000546842 IGF1RP08069 1367 aa50.55■■■■■ 5.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms