RNA–Protein interactions for RNA: ENST00000477451.5

ARF1-207, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-207ENST00000477451 NISCHQ9Y2I1 1504 aa39.69■■■■□ 3.94
ARF1-207ENST00000477451 ABCC9O60706 1549 aa35.09■■■■□ 3.21
ARF1-207ENST00000477451 CCDC180Q9P1Z9 1646 aa35.03■■■■□ 3.2
ARF1-207ENST00000477451 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
ARF1-207ENST00000477451 ZCCHC6Q5VYS8 1495 aaKnown RBP33.27■■■□□ 2.92
ARF1-207ENST00000477451 NACADO15069 1562 aa33.16■■■□□ 2.9
ARF1-207ENST00000477451 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
ARF1-207ENST00000477451 DCAF1Q9Y4B6 1507 aa32.91■■■□□ 2.86
ARF1-207ENST00000477451 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
ARF1-207ENST00000477451 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
ARF1-207ENST00000477451 PABPN1Q86U42 306 aaKnown RBP eCLIP32.6■■■□□ 2.81
ARF1-207ENST00000477451 UNC13AQ9UPW8 1703 aa32.59■■■□□ 2.81
ARF1-207ENST00000477451 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.77
ARF1-207ENST00000477451 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
ARF1-207ENST00000477451 SCRIBQ14160 1630 aa31.87■■■□□ 2.69
ARF1-207ENST00000477451 CC2D2AQ9P2K1 1620 aa31.72■■■□□ 2.67
ARF1-207ENST00000477451 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
ARF1-207ENST00000477451 EIF4G1Q04637 1599 aaKnown RBP31.62■■■□□ 2.65
ARF1-207ENST00000477451 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
ARF1-207ENST00000477451 RSF1Q96T23 1441 aaPredicted RBP30.61■■■□□ 2.49
ARF1-207ENST00000477451 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
ARF1-207ENST00000477451 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
ARF1-207ENST00000477451 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
ARF1-207ENST00000477451 NCAPD3P42695 1498 aa30.55■■■□□ 2.48
ARF1-207ENST00000477451 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
ARF1-207ENST00000477451 CUX2O14529 1486 aa30.43■■■□□ 2.46
ARF1-207ENST00000477451 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
ARF1-207ENST00000477451 ATAD2BQ9ULI0 1458 aa30.41■■■□□ 2.46
ARF1-207ENST00000477451 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
ARF1-207ENST00000477451 HMGXB3Q12766 1538 aa30.35■■■□□ 2.45
ARF1-207ENST00000477451 WIZO95785 1651 aa30.31■■■□□ 2.44
ARF1-207ENST00000477451 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
ARF1-207ENST00000477451 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
ARF1-207ENST00000477451 TOP2AP11388 1531 aaKnown RBP30.07■■■□□ 2.4
ARF1-207ENST00000477451 NESP48681 1621 aa30.04■■■□□ 2.4
ARF1-207ENST00000477451 LAMC3Q9Y6N6 1575 aa29.95■■■□□ 2.39
ARF1-207ENST00000477451 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
ARF1-207ENST00000477451 PDS5BQ9NTI5 1447 aa29.79■■■□□ 2.36
ARF1-207ENST00000477451 KIF21AQ7Z4S6 1674 aa29.73■■■□□ 2.35
ARF1-207ENST00000477451 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
ARF1-207ENST00000477451 CADPSQ9ULU8 1353 aa29.62■■■□□ 2.33
ARF1-207ENST00000477451 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
ARF1-207ENST00000477451 WDR62O43379 1518 aa29.43■■■□□ 2.3
ARF1-207ENST00000477451 CEP164Q9UPV0 1460 aa29.37■■■□□ 2.29
ARF1-207ENST00000477451 FANCD2Q9BXW9 1451 aa29.29■■■□□ 2.28
ARF1-207ENST00000477451 CFTRP13569 1480 aa29.23■■■□□ 2.27
ARF1-207ENST00000477451 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
ARF1-207ENST00000477451 CHIC1Q5VXU3 224 aa29.12■■■□□ 2.25
ARF1-207ENST00000477451 PRDM2Q13029 1718 aa29.1■■■□□ 2.25
ARF1-207ENST00000477451 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
ARF1-207ENST00000477451 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
ARF1-207ENST00000477451 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
ARF1-207ENST00000477451 WRNQ14191 1432 aaPredicted RBP eCLIP28.85■■■□□ 2.21
ARF1-207ENST00000477451 IFT140Q96RY7 1462 aa28.79■■■□□ 2.2
ARF1-207ENST00000477451 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
ARF1-207ENST00000477451 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
ARF1-207ENST00000477451 TOP2BQ02880 1626 aa28.68■■■□□ 2.18
ARF1-207ENST00000477451 BIVM-ERCC5R4GMW8 1640 aa28.66■■■□□ 2.18
ARF1-207ENST00000477451 ZNF608Q9ULD9 1512 aaPredicted RBP28.65■■■□□ 2.18
ARF1-207ENST00000477451 CUX1P39880 1505 aa28.64■■■□□ 2.18
ARF1-207ENST00000477451 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
ARF1-207ENST00000477451 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
ARF1-207ENST00000477451 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
ARF1-207ENST00000477451 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
ARF1-207ENST00000477451 EIF4G3O43432 1585 aaKnown RBP28.56■■■□□ 2.16
ARF1-207ENST00000477451 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
ARF1-207ENST00000477451 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
ARF1-207ENST00000477451 FGD5Q6ZNL6 1462 aa28.4■■■□□ 2.14
ARF1-207ENST00000477451 CHD1O14646 1710 aa28.39■■■□□ 2.14
ARF1-207ENST00000477451 AQRO60306 1485 aaKnown RBP eCLIP28.39■■■□□ 2.137e-7■■■■□ 21.9
ARF1-207ENST00000477451 POLA1P09884 1462 aaPredicted RBP28.38■■■□□ 2.13
ARF1-207ENST00000477451 EEA1Q15075 1411 aa28.32■■■□□ 2.12
ARF1-207ENST00000477451 FBLN2P98095 1184 aa28.31■■■□□ 2.12
ARF1-207ENST00000477451 SOGA1O94964 1423 aa28.29■■■□□ 2.12
ARF1-207ENST00000477451 WDR97A6NE52 1622 aa28.28■■■□□ 2.12
ARF1-207ENST00000477451 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
ARF1-207ENST00000477451 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
ARF1-207ENST00000477451 FAM9AQ8IZU1 332 aaPredicted RBP28.21■■■□□ 2.11
ARF1-207ENST00000477451 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
ARF1-207ENST00000477451 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
ARF1-207ENST00000477451 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
ARF1-207ENST00000477451 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
ARF1-207ENST00000477451 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
ARF1-207ENST00000477451 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.09
ARF1-207ENST00000477451 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
ARF1-207ENST00000477451 CSRNP3Q8WYN3 585 aa28.11■■■□□ 2.09
ARF1-207ENST00000477451 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
ARF1-207ENST00000477451 TRHP20396 242 aaPredicted RBP28.08■■■□□ 2.09
ARF1-207ENST00000477451 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
ARF1-207ENST00000477451 CLASP1Q7Z460 1538 aa28.03■■■□□ 2.08
ARF1-207ENST00000477451 SYNJ2O15056 1496 aa28.01■■■□□ 2.07
ARF1-207ENST00000477451 ABCA5Q8WWZ7 1642 aa27.98■■■□□ 2.07
ARF1-207ENST00000477451 PBRM1Q86U86 1689 aa27.96■■■□□ 2.07
ARF1-207ENST00000477451 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.06
ARF1-207ENST00000477451 KIF21BO75037 1637 aa27.92■■■□□ 2.06
ARF1-207ENST00000477451 IGF1RP08069 1367 aa27.92■■■□□ 2.06
ARF1-207ENST00000477451 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
ARF1-207ENST00000477451 PRXQ9BXM0 1461 aa27.88■■■□□ 2.05
ARF1-207ENST00000477451 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
ARF1-207ENST00000477451 GOLGA3Q08378 1498 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms