RNA–Protein interactions for RNA: ENST00000490230.1

PBXIP1-204, Transcript of PBX homeobox interacting protein 1, humanhuman

TSL 5

Gene PBXIP1, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-204ENST00000490230 NISCHQ9Y2I1 1504 aa46.61■■■■■ 5.05
PBXIP1-204ENST00000490230 CCDC180Q9P1Z9 1646 aa41.48■■■■■ 4.23
PBXIP1-204ENST00000490230 ABCC9O60706 1549 aa40.91■■■■■ 4.14
PBXIP1-204ENST00000490230 DCAF8L2P0C7V8 631 aa39.22■■■■□ 3.87
PBXIP1-204ENST00000490230 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
PBXIP1-204ENST00000490230 NACADO15069 1562 aa39.04■■■■□ 3.84
PBXIP1-204ENST00000490230 ZCCHC6Q5VYS8 1495 aaKnown RBP38.77■■■■□ 3.8
PBXIP1-204ENST00000490230 MYO15BQ96JP2 1530 aa38.64■■■■□ 3.78
PBXIP1-204ENST00000490230 DCAF1Q9Y4B6 1507 aa38.45■■■■□ 3.75
PBXIP1-204ENST00000490230 UNC13AQ9UPW8 1703 aa38.37■■■■□ 3.73
PBXIP1-204ENST00000490230 PABPN1Q86U42 306 aaKnown RBP eCLIP38.23■■■■□ 3.71
PBXIP1-204ENST00000490230 BICRAQ9NZM4 1560 aa38.02■■■■□ 3.68
PBXIP1-204ENST00000490230 SCRIBQ14160 1630 aa37.98■■■■□ 3.67
PBXIP1-204ENST00000490230 DNAJC5BQ9UF47 199 aa37.73■■■■□ 3.63
PBXIP1-204ENST00000490230 SHROOM4Q9ULL8 1493 aa37.42■■■■□ 3.58
PBXIP1-204ENST00000490230 EIF4G1Q04637 1599 aaKnown RBP37.02■■■■□ 3.52
PBXIP1-204ENST00000490230 CC2D2AQ9P2K1 1620 aa36.95■■■■□ 3.51
PBXIP1-204ENST00000490230 CECR2Q9BXF3 1484 aa36.71■■■■□ 3.47
PBXIP1-204ENST00000490230 SMARCA4P51532 1647 aa36.23■■■■□ 3.39
PBXIP1-204ENST00000490230 BAZ1AQ9NRL2 1556 aaPredicted RBP36.11■■■■□ 3.37
PBXIP1-204ENST00000490230 ATAD2BQ9ULI0 1458 aa36.05■■■■□ 3.36
PBXIP1-204ENST00000490230 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
PBXIP1-204ENST00000490230 SMARCA2P51531 1590 aa35.98■■■■□ 3.35
PBXIP1-204ENST00000490230 MROH2BQ7Z745 1585 aa35.97■■■■□ 3.35
PBXIP1-204ENST00000490230 HMGXB3Q12766 1538 aa35.82■■■■□ 3.32
PBXIP1-204ENST00000490230 PEG3Q9GZU2 1588 aa35.78■■■■□ 3.32
PBXIP1-204ENST00000490230 BAZ1BQ9UIG0 1483 aaKnown RBP35.78■■■■□ 3.32
PBXIP1-204ENST00000490230 WIZO95785 1651 aa35.62■■■■□ 3.29
PBXIP1-204ENST00000490230 RSF1Q96T23 1441 aaPredicted RBP35.46■■■■□ 3.27
PBXIP1-204ENST00000490230 NESP48681 1621 aa35.35■■■■□ 3.25
PBXIP1-204ENST00000490230 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
PBXIP1-204ENST00000490230 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
PBXIP1-204ENST00000490230 LAMC3Q9Y6N6 1575 aa35.12■■■■□ 3.21
PBXIP1-204ENST00000490230 CADPSQ9ULU8 1353 aa35■■■■□ 3.19
PBXIP1-204ENST00000490230 KIF21AQ7Z4S6 1674 aa34.92■■■■□ 3.18
PBXIP1-204ENST00000490230 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
PBXIP1-204ENST00000490230 CUX2O14529 1486 aa34.83■■■■□ 3.17
PBXIP1-204ENST00000490230 THOC2Q8NI27 1593 aaKnown RBP34.78■■■■□ 3.16
PBXIP1-204ENST00000490230 CCDC88BA6NC98 1476 aa34.77■■■■□ 3.16
PBXIP1-204ENST00000490230 CFTRP13569 1480 aa34.73■■■■□ 3.15
PBXIP1-204ENST00000490230 FANCD2Q9BXW9 1451 aa34.63■■■■□ 3.13
PBXIP1-204ENST00000490230 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
PBXIP1-204ENST00000490230 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
PBXIP1-204ENST00000490230 MRC2Q9UBG0 1479 aa34.57■■■■□ 3.12
PBXIP1-204ENST00000490230 PRDM2Q13029 1718 aa34.51■■■■□ 3.12
PBXIP1-204ENST00000490230 WDR62O43379 1518 aa34.45■■■■□ 3.1
PBXIP1-204ENST00000490230 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
PBXIP1-204ENST00000490230 TOPBP1Q92547 1522 aa34.05■■■■□ 3.04
PBXIP1-204ENST00000490230 DNAJC5Q9H3Z4 198 aa34.04■■■■□ 3.04
PBXIP1-204ENST00000490230 DNMBPQ6XZF7 1577 aa33.98■■■■□ 3.03
PBXIP1-204ENST00000490230 ABCC8Q09428 1581 aa33.96■■■■□ 3.03
PBXIP1-204ENST00000490230 IFT140Q96RY7 1462 aa33.84■■■■□ 3.01
PBXIP1-204ENST00000490230 ZNF608Q9ULD9 1512 aaPredicted RBP33.79■■■■□ 3
PBXIP1-204ENST00000490230 CUX1P39880 1505 aa33.75■■■□□ 2.99
PBXIP1-204ENST00000490230 POLA1P09884 1462 aaPredicted RBP33.74■■■□□ 2.99
PBXIP1-204ENST00000490230 TARBP1Q13395 1621 aaKnown RBP33.69■■■□□ 2.98
PBXIP1-204ENST00000490230 FGD5Q6ZNL6 1462 aa33.67■■■□□ 2.98
PBXIP1-204ENST00000490230 RAD54L2Q9Y4B4 1467 aa33.67■■■□□ 2.98
PBXIP1-204ENST00000490230 EIF4G3O43432 1585 aaKnown RBP33.63■■■□□ 2.97
PBXIP1-204ENST00000490230 SOGA1O94964 1423 aa33.62■■■□□ 2.97
PBXIP1-204ENST00000490230 AQRO60306 1485 aaKnown RBP eCLIP33.59■■■□□ 2.972e-7■■■■■ 33.7
PBXIP1-204ENST00000490230 TDRD9Q8NDG6 1382 aaKnown RBP33.49■■■□□ 2.95
PBXIP1-204ENST00000490230 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.94
PBXIP1-204ENST00000490230 OSCARQ8IYS5 282 aa33.43■■■□□ 2.94
PBXIP1-204ENST00000490230 SYNJ1O43426 1573 aa33.42■■■□□ 2.94
PBXIP1-204ENST00000490230 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
PBXIP1-204ENST00000490230 BIVM-ERCC5R4GMW8 1640 aa33.38■■■□□ 2.93
PBXIP1-204ENST00000490230 TOP2BQ02880 1626 aa33.37■■■□□ 2.93
PBXIP1-204ENST00000490230 CHD1O14646 1710 aa33.29■■■□□ 2.92
PBXIP1-204ENST00000490230 FBLN2P98095 1184 aa33.28■■■□□ 2.92
PBXIP1-204ENST00000490230 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
PBXIP1-204ENST00000490230 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
PBXIP1-204ENST00000490230 GAPVD1Q14C86 1478 aa33.22■■■□□ 2.91
PBXIP1-204ENST00000490230 PBRM1Q86U86 1689 aa33.21■■■□□ 2.91
PBXIP1-204ENST00000490230 GRIN2BQ13224 1484 aa33.21■■■□□ 2.91
PBXIP1-204ENST00000490230 ABCA5Q8WWZ7 1642 aa33.18■■■□□ 2.9
PBXIP1-204ENST00000490230 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
PBXIP1-204ENST00000490230 CHMP7Q8WUX9 453 aaPredicted RBP33.09■■■□□ 2.89
PBXIP1-204ENST00000490230 SYNJ2O15056 1496 aa33.01■■■□□ 2.88
PBXIP1-204ENST00000490230 TRIM41Q8WV44 630 aa32.99■■■□□ 2.87
PBXIP1-204ENST00000490230 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.86
PBXIP1-204ENST00000490230 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.86
PBXIP1-204ENST00000490230 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.86
PBXIP1-204ENST00000490230 ADAMTS12P58397 1594 aa32.89■■■□□ 2.86
PBXIP1-204ENST00000490230 ARHGEF11O15085 1522 aa32.88■■■□□ 2.85
PBXIP1-204ENST00000490230 ERICH3Q5RHP9 1530 aa32.86■■■□□ 2.85
PBXIP1-204ENST00000490230 CLASP1Q7Z460 1538 aa32.83■■■□□ 2.85
PBXIP1-204ENST00000490230 GRIN2AQ12879 1464 aa32.8■■■□□ 2.84
PBXIP1-204ENST00000490230 FHAD1B1AJZ9 1412 aa32.8■■■□□ 2.84
PBXIP1-204ENST00000490230 KIF27Q86VH2 1401 aa32.75■■■□□ 2.83
PBXIP1-204ENST00000490230 CEP170Q5SW79 1584 aa32.68■■■□□ 2.82
PBXIP1-204ENST00000490230 CYB5RLQ6IPT4 315 aa32.67■■■□□ 2.82
PBXIP1-204ENST00000490230 IGF1RP08069 1367 aa32.64■■■□□ 2.82
PBXIP1-204ENST00000490230 NUP160Q12769 1436 aa32.63■■■□□ 2.81
PBXIP1-204ENST00000490230 ARAP1Q96P48 1450 aa32.61■■■□□ 2.81
PBXIP1-204ENST00000490230 CUL7Q14999 1698 aa32.55■■■□□ 2.8
PBXIP1-204ENST00000490230 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.79
PBXIP1-204ENST00000490230 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
PBXIP1-204ENST00000490230 ERCC6L2Q5T890 1561 aa32.46■■■□□ 2.79
PBXIP1-204ENST00000490230 SHROOM2Q13796 1616 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms