RNA–Protein interactions for RNA: ENST00000550082.5

NR4A1-213, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5 BASIC

Gene NR4A1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-213ENST00000550082 NISCHQ9Y2I1 1504 aa34.83■■■■□ 3.17
NR4A1-213ENST00000550082 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
NR4A1-213ENST00000550082 ABCC9O60706 1549 aa29.91■■■□□ 2.38
NR4A1-213ENST00000550082 DCAF8L2P0C7V8 631 aa29.25■■■□□ 2.27
NR4A1-213ENST00000550082 ZCCHC6Q5VYS8 1495 aaKnown RBP29.07■■■□□ 2.24
NR4A1-213ENST00000550082 NACADO15069 1562 aa28.74■■■□□ 2.19
NR4A1-213ENST00000550082 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
NR4A1-213ENST00000550082 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
NR4A1-213ENST00000550082 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
NR4A1-213ENST00000550082 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
NR4A1-213ENST00000550082 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.11
NR4A1-213ENST00000550082 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
NR4A1-213ENST00000550082 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
NR4A1-213ENST00000550082 BICRAQ9NZM4 1560 aa27.95■■■□□ 2.06
NR4A1-213ENST00000550082 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
NR4A1-213ENST00000550082 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
NR4A1-213ENST00000550082 EIF4G1Q04637 1599 aaKnown RBP27.15■■□□□ 1.94
NR4A1-213ENST00000550082 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
NR4A1-213ENST00000550082 MROH2BQ7Z745 1585 aa26.95■■□□□ 1.91
NR4A1-213ENST00000550082 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
NR4A1-213ENST00000550082 BAZ1AQ9NRL2 1556 aaPredicted RBP26.91■■□□□ 1.9
NR4A1-213ENST00000550082 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
NR4A1-213ENST00000550082 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
NR4A1-213ENST00000550082 WIZO95785 1651 aa26.7■■□□□ 1.87
NR4A1-213ENST00000550082 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
NR4A1-213ENST00000550082 SMARCA2P51531 1590 aa26.59■■□□□ 1.85
NR4A1-213ENST00000550082 NCAPD3P42695 1498 aa26.57■■□□□ 1.84
NR4A1-213ENST00000550082 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
NR4A1-213ENST00000550082 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
NR4A1-213ENST00000550082 HMGXB3Q12766 1538 aa26.42■■□□□ 1.82
NR4A1-213ENST00000550082 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
NR4A1-213ENST00000550082 CCDC88BA6NC98 1476 aa26.1■■□□□ 1.77
NR4A1-213ENST00000550082 NESP48681 1621 aa26.03■■□□□ 1.76
NR4A1-213ENST00000550082 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
NR4A1-213ENST00000550082 CFTRP13569 1480 aa25.78■■□□□ 1.72
NR4A1-213ENST00000550082 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
NR4A1-213ENST00000550082 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
NR4A1-213ENST00000550082 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
NR4A1-213ENST00000550082 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
NR4A1-213ENST00000550082 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
NR4A1-213ENST00000550082 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
NR4A1-213ENST00000550082 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
NR4A1-213ENST00000550082 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
NR4A1-213ENST00000550082 THOC2Q8NI27 1593 aaKnown RBP25.38■■□□□ 1.65
NR4A1-213ENST00000550082 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
NR4A1-213ENST00000550082 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
NR4A1-213ENST00000550082 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
NR4A1-213ENST00000550082 WDR62O43379 1518 aa25.24■■□□□ 1.63
NR4A1-213ENST00000550082 CUX1P39880 1505 aa25.23■■□□□ 1.63
NR4A1-213ENST00000550082 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
NR4A1-213ENST00000550082 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
NR4A1-213ENST00000550082 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
NR4A1-213ENST00000550082 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
NR4A1-213ENST00000550082 CUX2O14529 1486 aa25.08■■□□□ 1.61
NR4A1-213ENST00000550082 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
NR4A1-213ENST00000550082 POLA1P09884 1462 aaPredicted RBP25.06■■□□□ 1.6
NR4A1-213ENST00000550082 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
NR4A1-213ENST00000550082 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
NR4A1-213ENST00000550082 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
NR4A1-213ENST00000550082 TRIM41Q8WV44 630 aa24.98■■□□□ 1.59
NR4A1-213ENST00000550082 SOGA1O94964 1423 aa24.97■■□□□ 1.59
NR4A1-213ENST00000550082 ZNF608Q9ULD9 1512 aaPredicted RBP24.94■■□□□ 1.58
NR4A1-213ENST00000550082 TARBP1Q13395 1621 aaKnown RBP24.91■■□□□ 1.58
NR4A1-213ENST00000550082 IFT140Q96RY7 1462 aa24.89■■□□□ 1.58
NR4A1-213ENST00000550082 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
NR4A1-213ENST00000550082 AQRO60306 1485 aaKnown RBP eCLIP24.85■■□□□ 1.57
NR4A1-213ENST00000550082 ABCA10Q8WWZ4 1543 aa24.77■■□□□ 1.56
NR4A1-213ENST00000550082 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
NR4A1-213ENST00000550082 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
NR4A1-213ENST00000550082 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
NR4A1-213ENST00000550082 GAPVD1Q14C86 1478 aa24.67■■□□□ 1.54
NR4A1-213ENST00000550082 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
NR4A1-213ENST00000550082 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
NR4A1-213ENST00000550082 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.53
NR4A1-213ENST00000550082 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
NR4A1-213ENST00000550082 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
NR4A1-213ENST00000550082 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
NR4A1-213ENST00000550082 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
NR4A1-213ENST00000550082 FBLN2P98095 1184 aa24.55■■□□□ 1.52
NR4A1-213ENST00000550082 IGF1RP08069 1367 aa24.52■■□□□ 1.52
NR4A1-213ENST00000550082 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.51
NR4A1-213ENST00000550082 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
NR4A1-213ENST00000550082 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
NR4A1-213ENST00000550082 MAGI1Q96QZ7 1491 aaPredicted RBP24.41■■□□□ 1.5
NR4A1-213ENST00000550082 CHD1O14646 1710 aa24.39■■□□□ 1.5
NR4A1-213ENST00000550082 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.49
NR4A1-213ENST00000550082 ADAMTS12P58397 1594 aa24.38■■□□□ 1.49
NR4A1-213ENST00000550082 CARMIL1Q5VZK9 1371 aa24.37■■□□□ 1.49
NR4A1-213ENST00000550082 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
NR4A1-213ENST00000550082 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
NR4A1-213ENST00000550082 CUL7Q14999 1698 aa24.28■■□□□ 1.48
NR4A1-213ENST00000550082 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
NR4A1-213ENST00000550082 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
NR4A1-213ENST00000550082 EEA1Q15075 1411 aa24.27■■□□□ 1.48
NR4A1-213ENST00000550082 PRXQ9BXM0 1461 aa24.23■■□□□ 1.47
NR4A1-213ENST00000550082 RAPGEF2Q9Y4G8 1499 aa24.22■■□□□ 1.47
NR4A1-213ENST00000550082 CEP170Q5SW79 1584 aa24.19■■□□□ 1.46
NR4A1-213ENST00000550082 NUP160Q12769 1436 aa24.12■■□□□ 1.45
NR4A1-213ENST00000550082 RANGAP1P46060 587 aaPredicted RBP24.08■■□□□ 1.44
NR4A1-213ENST00000550082 KIF21BO75037 1637 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms