RNA–Protein interactions for RNA: ENST00000545748.5

NR4A1-206, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2 BASIC

Gene NR4A1, Length 3,511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-206ENST00000545748 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
NR4A1-206ENST00000545748 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
NR4A1-206ENST00000545748 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
NR4A1-206ENST00000545748 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
NR4A1-206ENST00000545748 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
NR4A1-206ENST00000545748 ABCC9O60706 1549 aa18.8■□□□□ 0.6
NR4A1-206ENST00000545748 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
NR4A1-206ENST00000545748 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
NR4A1-206ENST00000545748 CCDC180Q9P1Z9 1646 aa18.42■□□□□ 0.54
NR4A1-206ENST00000545748 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
NR4A1-206ENST00000545748 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
NR4A1-206ENST00000545748 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
NR4A1-206ENST00000545748 LOC105371045A0A1W2PR82 267 aa18.31■□□□□ 0.52
NR4A1-206ENST00000545748 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
NR4A1-206ENST00000545748 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
NR4A1-206ENST00000545748 SCRIBQ14160 1630 aa18.21■□□□□ 0.5
NR4A1-206ENST00000545748 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
NR4A1-206ENST00000545748 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
NR4A1-206ENST00000545748 UBTFP17480 764 aaKnown RBP17.81■□□□□ 0.44
NR4A1-206ENST00000545748 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
NR4A1-206ENST00000545748 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
NR4A1-206ENST00000545748 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
NR4A1-206ENST00000545748 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
NR4A1-206ENST00000545748 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
NR4A1-206ENST00000545748 NACADO15069 1562 aa17.54■□□□□ 0.4
NR4A1-206ENST00000545748 APLP2Q06481 763 aa17.52■□□□□ 0.4
NR4A1-206ENST00000545748 ATP1B4Q9UN42 357 aaPredicted RBP17.49■□□□□ 0.39
NR4A1-206ENST00000545748 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
NR4A1-206ENST00000545748 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
NR4A1-206ENST00000545748 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
NR4A1-206ENST00000545748 HRCP23327 699 aa17.35■□□□□ 0.37
NR4A1-206ENST00000545748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
NR4A1-206ENST00000545748 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
NR4A1-206ENST00000545748 WIZO95785 1651 aa17.25■□□□□ 0.35
NR4A1-206ENST00000545748 ITGAEP38570 1179 aa17.23■□□□□ 0.35
NR4A1-206ENST00000545748 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
NR4A1-206ENST00000545748 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
NR4A1-206ENST00000545748 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
NR4A1-206ENST00000545748 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
NR4A1-206ENST00000545748 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
NR4A1-206ENST00000545748 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
NR4A1-206ENST00000545748 SOGA1O94964 1423 aa17■□□□□ 0.31
NR4A1-206ENST00000545748 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
NR4A1-206ENST00000545748 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
NR4A1-206ENST00000545748 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
NR4A1-206ENST00000545748 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
NR4A1-206ENST00000545748 FBLN2P98095 1184 aa16.84■□□□□ 0.29
NR4A1-206ENST00000545748 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
NR4A1-206ENST00000545748 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
NR4A1-206ENST00000545748 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
NR4A1-206ENST00000545748 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
NR4A1-206ENST00000545748 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
NR4A1-206ENST00000545748 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
NR4A1-206ENST00000545748 CLIP1P30622 1438 aa16.69■□□□□ 0.26
NR4A1-206ENST00000545748 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
NR4A1-206ENST00000545748 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
NR4A1-206ENST00000545748 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
NR4A1-206ENST00000545748 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
NR4A1-206ENST00000545748 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
NR4A1-206ENST00000545748 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
NR4A1-206ENST00000545748 TNIKQ9UKE5 1360 aa16.59■□□□□ 0.25
NR4A1-206ENST00000545748 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
NR4A1-206ENST00000545748 EEA1Q15075 1411 aa16.52■□□□□ 0.24
NR4A1-206ENST00000545748 CUX2O14529 1486 aa16.52■□□□□ 0.23
NR4A1-206ENST00000545748 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
NR4A1-206ENST00000545748 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
NR4A1-206ENST00000545748 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
NR4A1-206ENST00000545748 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
NR4A1-206ENST00000545748 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
NR4A1-206ENST00000545748 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.23
NR4A1-206ENST00000545748 TDRD9Q8NDG6 1382 aaKnown RBP16.46■□□□□ 0.23
NR4A1-206ENST00000545748 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
NR4A1-206ENST00000545748 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
NR4A1-206ENST00000545748 CHIC2Q9UKJ5 165 aa16.41■□□□□ 0.22
NR4A1-206ENST00000545748 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
NR4A1-206ENST00000545748 ZNF777Q9ULD5 760 aaPredicted RBP16.39■□□□□ 0.21
NR4A1-206ENST00000545748 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
NR4A1-206ENST00000545748 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
NR4A1-206ENST00000545748 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
NR4A1-206ENST00000545748 NESP48681 1621 aa16.36■□□□□ 0.21
NR4A1-206ENST00000545748 MYT1LQ9UL68 1186 aa16.36■□□□□ 0.21
NR4A1-206ENST00000545748 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
NR4A1-206ENST00000545748 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
NR4A1-206ENST00000545748 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
NR4A1-206ENST00000545748 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
NR4A1-206ENST00000545748 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
NR4A1-206ENST00000545748 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
NR4A1-206ENST00000545748 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
NR4A1-206ENST00000545748 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.2
NR4A1-206ENST00000545748 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
NR4A1-206ENST00000545748 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
NR4A1-206ENST00000545748 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
NR4A1-206ENST00000545748 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
NR4A1-206ENST00000545748 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
NR4A1-206ENST00000545748 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
NR4A1-206ENST00000545748 IGF1RP08069 1367 aa16.19■□□□□ 0.18
NR4A1-206ENST00000545748 CFTRP13569 1480 aa16.18■□□□□ 0.18
NR4A1-206ENST00000545748 FHOD3Q2V2M9 1422 aa16.18■□□□□ 0.18
NR4A1-206ENST00000545748 CUX1P39880 1505 aa16.17■□□□□ 0.18
NR4A1-206ENST00000545748 SIN3AQ96ST3 1273 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms