RNA–Protein interactions for RNA: ENST00000418975.1

LSP1-206, Transcript of lymphocyte specific protein 1, humanhuman

TSL 3

Gene LSP1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-206ENST00000418975 NISCHQ9Y2I1 1504 aa38.24■■■■□ 3.71
LSP1-206ENST00000418975 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
LSP1-206ENST00000418975 ABCC9O60706 1549 aa33.79■■■■□ 3
LSP1-206ENST00000418975 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
LSP1-206ENST00000418975 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
LSP1-206ENST00000418975 NACADO15069 1562 aa32.17■■■□□ 2.74
LSP1-206ENST00000418975 MYO15BQ96JP2 1530 aa31.82■■■□□ 2.68
LSP1-206ENST00000418975 ZCCHC6Q5VYS8 1495 aaKnown RBP31.76■■■□□ 2.67
LSP1-206ENST00000418975 PABPN1Q86U42 306 aaKnown RBP eCLIP31.58■■■□□ 2.65
LSP1-206ENST00000418975 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
LSP1-206ENST00000418975 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
LSP1-206ENST00000418975 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
LSP1-206ENST00000418975 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
LSP1-206ENST00000418975 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
LSP1-206ENST00000418975 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
LSP1-206ENST00000418975 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
LSP1-206ENST00000418975 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.47
LSP1-206ENST00000418975 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.46
LSP1-206ENST00000418975 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
LSP1-206ENST00000418975 NCAPD3P42695 1498 aa29.7■■■□□ 2.35
LSP1-206ENST00000418975 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
LSP1-206ENST00000418975 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
LSP1-206ENST00000418975 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
LSP1-206ENST00000418975 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
LSP1-206ENST00000418975 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
LSP1-206ENST00000418975 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
LSP1-206ENST00000418975 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
LSP1-206ENST00000418975 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
LSP1-206ENST00000418975 WIZO95785 1651 aa29.15■■■□□ 2.26
LSP1-206ENST00000418975 NESP48681 1621 aa29.13■■■□□ 2.25
LSP1-206ENST00000418975 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
LSP1-206ENST00000418975 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
LSP1-206ENST00000418975 CUX2O14529 1486 aa28.91■■■□□ 2.22
LSP1-206ENST00000418975 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
LSP1-206ENST00000418975 PDS5BQ9NTI5 1447 aa28.83■■■□□ 2.21
LSP1-206ENST00000418975 TOP2AP11388 1531 aaKnown RBP28.79■■■□□ 2.2
LSP1-206ENST00000418975 KIF21AQ7Z4S6 1674 aa28.74■■■□□ 2.19
LSP1-206ENST00000418975 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
LSP1-206ENST00000418975 CFTRP13569 1480 aa28.58■■■□□ 2.17
LSP1-206ENST00000418975 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
LSP1-206ENST00000418975 FANCD2Q9BXW9 1451 aa28.52■■■□□ 2.16
LSP1-206ENST00000418975 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
LSP1-206ENST00000418975 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
LSP1-206ENST00000418975 DNAJC5Q9H3Z4 198 aa28.49■■■□□ 2.15
LSP1-206ENST00000418975 WDR62O43379 1518 aa28.41■■■□□ 2.14
LSP1-206ENST00000418975 PRDM2Q13029 1718 aa28.27■■■□□ 2.12
LSP1-206ENST00000418975 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
LSP1-206ENST00000418975 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
LSP1-206ENST00000418975 TOPBP1Q92547 1522 aa28.01■■■□□ 2.07
LSP1-206ENST00000418975 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
LSP1-206ENST00000418975 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
LSP1-206ENST00000418975 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
LSP1-206ENST00000418975 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
LSP1-206ENST00000418975 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
LSP1-206ENST00000418975 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
LSP1-206ENST00000418975 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
LSP1-206ENST00000418975 EIF4G3O43432 1585 aaKnown RBP27.68■■■□□ 2.02
LSP1-206ENST00000418975 SOGA1O94964 1423 aa27.67■■■□□ 2.02
LSP1-206ENST00000418975 CUX1P39880 1505 aa27.67■■■□□ 2.02
LSP1-206ENST00000418975 RAD54L2Q9Y4B4 1467 aa27.67■■■□□ 2.02
LSP1-206ENST00000418975 AQRO60306 1485 aaKnown RBP eCLIP27.66■■■□□ 2.02
LSP1-206ENST00000418975 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.02
LSP1-206ENST00000418975 TDRD9Q8NDG6 1382 aaKnown RBP27.58■■■□□ 2.01
LSP1-206ENST00000418975 FBLN2P98095 1184 aa27.48■■□□□ 1.99
LSP1-206ENST00000418975 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
LSP1-206ENST00000418975 WDR97A6NE52 1622 aa27.42■■□□□ 1.98
LSP1-206ENST00000418975 CHD1O14646 1710 aa27.39■■□□□ 1.98
LSP1-206ENST00000418975 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
LSP1-206ENST00000418975 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
LSP1-206ENST00000418975 GRIN2BQ13224 1484 aa27.36■■□□□ 1.97
LSP1-206ENST00000418975 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
LSP1-206ENST00000418975 TOP2BQ02880 1626 aa27.33■■□□□ 1.97
LSP1-206ENST00000418975 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
LSP1-206ENST00000418975 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
LSP1-206ENST00000418975 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
LSP1-206ENST00000418975 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
LSP1-206ENST00000418975 MAGI1Q96QZ7 1491 aaPredicted RBP27.3■■□□□ 1.96
LSP1-206ENST00000418975 RIMBP3CA6NJZ7 1639 aa27.27■■□□□ 1.96
LSP1-206ENST00000418975 RIMBP3BA6NNM3 1639 aa27.27■■□□□ 1.96
LSP1-206ENST00000418975 RIMBP3Q9UFD9 1639 aa27.27■■□□□ 1.96
LSP1-206ENST00000418975 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
LSP1-206ENST00000418975 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
LSP1-206ENST00000418975 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
LSP1-206ENST00000418975 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
LSP1-206ENST00000418975 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
LSP1-206ENST00000418975 CLASP1Q7Z460 1538 aa27.08■■□□□ 1.93
LSP1-206ENST00000418975 ADAMTS12P58397 1594 aa27.01■■□□□ 1.91
LSP1-206ENST00000418975 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
LSP1-206ENST00000418975 GRIN2AQ12879 1464 aa27■■□□□ 1.91
LSP1-206ENST00000418975 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
LSP1-206ENST00000418975 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
LSP1-206ENST00000418975 NUP160Q12769 1436 aa26.87■■□□□ 1.89
LSP1-206ENST00000418975 CEP170Q5SW79 1584 aa26.86■■□□□ 1.89
LSP1-206ENST00000418975 KIF27Q86VH2 1401 aa26.86■■□□□ 1.89
LSP1-206ENST00000418975 IGF1RP08069 1367 aa26.8■■□□□ 1.88
LSP1-206ENST00000418975 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
LSP1-206ENST00000418975 TRHP20396 242 aaPredicted RBP26.69■■□□□ 1.86
LSP1-206ENST00000418975 JPH4Q96JJ6 628 aa26.68■■□□□ 1.86
LSP1-206ENST00000418975 CUL7Q14999 1698 aa26.68■■□□□ 1.86
LSP1-206ENST00000418975 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms