RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 NISCHQ9Y2I1 1504 aa39.44■■■■□ 3.9
LSP1-217ENST00000612798 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
LSP1-217ENST00000612798 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
LSP1-217ENST00000612798 ABCC9O60706 1549 aa33.04■■■□□ 2.88
LSP1-217ENST00000612798 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
LSP1-217ENST00000612798 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
LSP1-217ENST00000612798 MYO15BQ96JP2 1530 aa32.21■■■□□ 2.75
LSP1-217ENST00000612798 NACADO15069 1562 aa32.18■■■□□ 2.74
LSP1-217ENST00000612798 SHROOM4Q9ULL8 1493 aa32.13■■■□□ 2.73
LSP1-217ENST00000612798 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
LSP1-217ENST00000612798 SCRIBQ14160 1630 aa31.78■■■□□ 2.68
LSP1-217ENST00000612798 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
LSP1-217ENST00000612798 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.58
LSP1-217ENST00000612798 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
LSP1-217ENST00000612798 CECR2Q9BXF3 1484 aa30.77■■■□□ 2.52
LSP1-217ENST00000612798 SUPT5HO00267 1087 aaKnown RBP30.73■■■□□ 2.51
LSP1-217ENST00000612798 MROH2BQ7Z745 1585 aa30.52■■■□□ 2.48
LSP1-217ENST00000612798 RSF1Q96T23 1441 aaPredicted RBP30.51■■■□□ 2.47
LSP1-217ENST00000612798 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
LSP1-217ENST00000612798 SMARCA4P51532 1647 aa30.39■■■□□ 2.45
LSP1-217ENST00000612798 WIZO95785 1651 aa30.26■■■□□ 2.43
LSP1-217ENST00000612798 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
LSP1-217ENST00000612798 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
LSP1-217ENST00000612798 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
LSP1-217ENST00000612798 SMARCA2P51531 1590 aa29.89■■■□□ 2.37
LSP1-217ENST00000612798 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
LSP1-217ENST00000612798 CC2D2AQ9P2K1 1620 aa29.84■■■□□ 2.37
LSP1-217ENST00000612798 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
LSP1-217ENST00000612798 NCAPD3P42695 1498 aa29.73■■■□□ 2.35
LSP1-217ENST00000612798 HMGXB3Q12766 1538 aa29.64■■■□□ 2.33
LSP1-217ENST00000612798 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
LSP1-217ENST00000612798 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
LSP1-217ENST00000612798 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.26
LSP1-217ENST00000612798 CFTRP13569 1480 aa29■■■□□ 2.23
LSP1-217ENST00000612798 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
LSP1-217ENST00000612798 NESP48681 1621 aa28.93■■■□□ 2.22
LSP1-217ENST00000612798 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
LSP1-217ENST00000612798 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
LSP1-217ENST00000612798 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
LSP1-217ENST00000612798 LAMC3Q9Y6N6 1575 aa28.75■■■□□ 2.19
LSP1-217ENST00000612798 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
LSP1-217ENST00000612798 FANCD2Q9BXW9 1451 aa28.67■■■□□ 2.18
LSP1-217ENST00000612798 SYNJ1O43426 1573 aa28.64■■■□□ 2.17
LSP1-217ENST00000612798 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
LSP1-217ENST00000612798 CUX1P39880 1505 aa28.55■■■□□ 2.16
LSP1-217ENST00000612798 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
LSP1-217ENST00000612798 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
LSP1-217ENST00000612798 TOP2BQ02880 1626 aa28.48■■■□□ 2.15
LSP1-217ENST00000612798 BIVM-ERCC5R4GMW8 1640 aa28.45■■■□□ 2.14
LSP1-217ENST00000612798 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
LSP1-217ENST00000612798 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
LSP1-217ENST00000612798 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
LSP1-217ENST00000612798 SOGA1O94964 1423 aa28.32■■■□□ 2.12
LSP1-217ENST00000612798 DNMBPQ6XZF7 1577 aa28.32■■■□□ 2.12
LSP1-217ENST00000612798 ERCC6Q03468 1493 aa28.3■■■□□ 2.12
LSP1-217ENST00000612798 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
LSP1-217ENST00000612798 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
LSP1-217ENST00000612798 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
LSP1-217ENST00000612798 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
LSP1-217ENST00000612798 LOC105371045A0A1W2PR82 267 aa28.16■■■□□ 2.1
LSP1-217ENST00000612798 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
LSP1-217ENST00000612798 EHMT2Q96KQ7 1210 aa28.11■■■□□ 2.09
LSP1-217ENST00000612798 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
LSP1-217ENST00000612798 WDR62O43379 1518 aa28.09■■■□□ 2.09
LSP1-217ENST00000612798 CUX2O14529 1486 aa28.04■■■□□ 2.08
LSP1-217ENST00000612798 EEA1Q15075 1411 aa28.03■■■□□ 2.08
LSP1-217ENST00000612798 CSRNP3Q8WYN3 585 aa28.03■■■□□ 2.08
LSP1-217ENST00000612798 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
LSP1-217ENST00000612798 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
LSP1-217ENST00000612798 TARBP1Q13395 1621 aaKnown RBP27.92■■■□□ 2.06
LSP1-217ENST00000612798 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
LSP1-217ENST00000612798 TDRD9Q8NDG6 1382 aaKnown RBP27.9■■■□□ 2.06
LSP1-217ENST00000612798 IGF1RP08069 1367 aa27.82■■■□□ 2.04
LSP1-217ENST00000612798 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
LSP1-217ENST00000612798 ZNF608Q9ULD9 1512 aaPredicted RBP27.79■■■□□ 2.04
LSP1-217ENST00000612798 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
LSP1-217ENST00000612798 AQRO60306 1485 aaKnown RBP eCLIP27.77■■■□□ 2.04
LSP1-217ENST00000612798 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.03
LSP1-217ENST00000612798 KIF21BO75037 1637 aa27.73■■■□□ 2.03
LSP1-217ENST00000612798 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
LSP1-217ENST00000612798 RAPGEF2Q9Y4G8 1499 aa27.73■■■□□ 2.03
LSP1-217ENST00000612798 GOLGA3Q08378 1498 aa27.7■■■□□ 2.02
LSP1-217ENST00000612798 UBTFP17480 764 aaKnown RBP27.68■■■□□ 2.02
LSP1-217ENST00000612798 CARMIL1Q5VZK9 1371 aa27.66■■■□□ 2.02
LSP1-217ENST00000612798 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
LSP1-217ENST00000612798 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
LSP1-217ENST00000612798 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
LSP1-217ENST00000612798 GRIN2BQ13224 1484 aa27.56■■■□□ 2
LSP1-217ENST00000612798 TNIKQ9UKE5 1360 aa27.56■■■□□ 2
LSP1-217ENST00000612798 CUL7Q14999 1698 aa27.54■■■□□ 2
LSP1-217ENST00000612798 SNAPC4Q5SXM2 1469 aa27.47■■□□□ 1.99
LSP1-217ENST00000612798 RANGAP1P46060 587 aaPredicted RBP27.45■■□□□ 1.99
LSP1-217ENST00000612798 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
LSP1-217ENST00000612798 CEP162Q5TB80 1403 aa27.43■■□□□ 1.98
LSP1-217ENST00000612798 FHAD1B1AJZ9 1412 aa27.42■■□□□ 1.98
LSP1-217ENST00000612798 MAGI1Q96QZ7 1491 aaPredicted RBP27.33■■□□□ 1.97
LSP1-217ENST00000612798 FBLN2P98095 1184 aa27.3■■□□□ 1.96
LSP1-217ENST00000612798 CLIP1P30622 1438 aa27.28■■□□□ 1.96
LSP1-217ENST00000612798 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
LSP1-217ENST00000612798 SYNJ2O15056 1496 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms