RNA–Protein interactions for RNA: ENST00000345728.9

FERMT3-202, Transcript of fermitin family member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FERMT3, Length 2,481 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-202ENST00000345728 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
FERMT3-202ENST00000345728 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
FERMT3-202ENST00000345728 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
FERMT3-202ENST00000345728 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
FERMT3-202ENST00000345728 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
FERMT3-202ENST00000345728 ABCC9O60706 1549 aa25.77■■□□□ 1.72
FERMT3-202ENST00000345728 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
FERMT3-202ENST00000345728 HRCP23327 699 aa25.56■■□□□ 1.68
FERMT3-202ENST00000345728 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
FERMT3-202ENST00000345728 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
FERMT3-202ENST00000345728 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
FERMT3-202ENST00000345728 NACADO15069 1562 aa24.92■■□□□ 1.58
FERMT3-202ENST00000345728 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
FERMT3-202ENST00000345728 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
FERMT3-202ENST00000345728 PPARGC1BQ86YN6 1023 aaKnown RBP24.72■■□□□ 1.55
FERMT3-202ENST00000345728 PCGF6Q9BYE7 350 aa24.7■■□□□ 1.54
FERMT3-202ENST00000345728 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
FERMT3-202ENST00000345728 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
FERMT3-202ENST00000345728 MYT1Q01538 1121 aa24.6■■□□□ 1.53
FERMT3-202ENST00000345728 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
FERMT3-202ENST00000345728 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.51
FERMT3-202ENST00000345728 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
FERMT3-202ENST00000345728 UNC13AQ9UPW8 1703 aa24.34■■□□□ 1.49
FERMT3-202ENST00000345728 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
FERMT3-202ENST00000345728 WIZO95785 1651 aa24.18■■□□□ 1.46
FERMT3-202ENST00000345728 BICRAQ9NZM4 1560 aa24.14■■□□□ 1.45
FERMT3-202ENST00000345728 ZEB1P37275 1124 aaPredicted RBP24.09■■□□□ 1.45
FERMT3-202ENST00000345728 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
FERMT3-202ENST00000345728 BAZ1AQ9NRL2 1556 aaPredicted RBP24■■□□□ 1.43
FERMT3-202ENST00000345728 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
FERMT3-202ENST00000345728 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
FERMT3-202ENST00000345728 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
FERMT3-202ENST00000345728 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
FERMT3-202ENST00000345728 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
FERMT3-202ENST00000345728 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
FERMT3-202ENST00000345728 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
FERMT3-202ENST00000345728 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
FERMT3-202ENST00000345728 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
FERMT3-202ENST00000345728 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
FERMT3-202ENST00000345728 ABCC8Q09428 1581 aa23.47■■□□□ 1.35
FERMT3-202ENST00000345728 NEUROD1Q13562 356 aa23.45■■□□□ 1.34
FERMT3-202ENST00000345728 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
FERMT3-202ENST00000345728 CENPBP07199 599 aaPredicted RBP23.4■■□□□ 1.34
FERMT3-202ENST00000345728 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
FERMT3-202ENST00000345728 GTF3C3Q9Y5Q9 886 aa23.38■■□□□ 1.33
FERMT3-202ENST00000345728 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
FERMT3-202ENST00000345728 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
FERMT3-202ENST00000345728 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
FERMT3-202ENST00000345728 SOGA1O94964 1423 aa23.14■■□□□ 1.3
FERMT3-202ENST00000345728 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
FERMT3-202ENST00000345728 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.28
FERMT3-202ENST00000345728 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
FERMT3-202ENST00000345728 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
FERMT3-202ENST00000345728 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
FERMT3-202ENST00000345728 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
FERMT3-202ENST00000345728 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
FERMT3-202ENST00000345728 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
FERMT3-202ENST00000345728 UBTFP17480 764 aaKnown RBP22.88■■□□□ 1.25
FERMT3-202ENST00000345728 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
FERMT3-202ENST00000345728 CCER1Q8TC90 406 aaPredicted RBP22.84■■□□□ 1.25
FERMT3-202ENST00000345728 CFTRP13569 1480 aa22.79■■□□□ 1.24
FERMT3-202ENST00000345728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
FERMT3-202ENST00000345728 NESP48681 1621 aa22.74■■□□□ 1.23
FERMT3-202ENST00000345728 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
FERMT3-202ENST00000345728 CUX1P39880 1505 aa22.69■■□□□ 1.22
FERMT3-202ENST00000345728 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
FERMT3-202ENST00000345728 BCL11AQ9H165 835 aa22.6■■□□□ 1.21
FERMT3-202ENST00000345728 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
FERMT3-202ENST00000345728 ZNF316A6NFI3 1004 aaPredicted RBP22.58■■□□□ 1.21
FERMT3-202ENST00000345728 EEA1Q15075 1411 aa22.57■■□□□ 1.2
FERMT3-202ENST00000345728 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
FERMT3-202ENST00000345728 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
FERMT3-202ENST00000345728 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
FERMT3-202ENST00000345728 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
FERMT3-202ENST00000345728 GOLGA3Q08378 1498 aa22.51■■□□□ 1.19
FERMT3-202ENST00000345728 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
FERMT3-202ENST00000345728 ANP32EQ9BTT0 268 aa22.51■■□□□ 1.19
FERMT3-202ENST00000345728 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
FERMT3-202ENST00000345728 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
FERMT3-202ENST00000345728 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
FERMT3-202ENST00000345728 CUX2O14529 1486 aa22.41■■□□□ 1.18
FERMT3-202ENST00000345728 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.18
FERMT3-202ENST00000345728 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
FERMT3-202ENST00000345728 MIER1Q8N108 512 aa22.34■■□□□ 1.17
FERMT3-202ENST00000345728 CLIP1P30622 1438 aa22.33■■□□□ 1.16
FERMT3-202ENST00000345728 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
FERMT3-202ENST00000345728 KIF21BO75037 1637 aa22.31■■□□□ 1.16
FERMT3-202ENST00000345728 IGF1RP08069 1367 aa22.29■■□□□ 1.16
FERMT3-202ENST00000345728 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
FERMT3-202ENST00000345728 TOPBP1Q92547 1522 aa22.27■■□□□ 1.16
FERMT3-202ENST00000345728 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
FERMT3-202ENST00000345728 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
FERMT3-202ENST00000345728 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
FERMT3-202ENST00000345728 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
FERMT3-202ENST00000345728 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
FERMT3-202ENST00000345728 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
FERMT3-202ENST00000345728 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
FERMT3-202ENST00000345728 P3H3Q8IVL6 736 aa22.2■■□□□ 1.14
FERMT3-202ENST00000345728 CARMIL1Q5VZK9 1371 aa22.18■■□□□ 1.14
FERMT3-202ENST00000345728 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms