RNA–Protein interactions for RNA: ENST00000243050.5

NR4A1-201, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-201ENST00000243050 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
NR4A1-201ENST00000243050 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.64
NR4A1-201ENST00000243050 ABCC9O60706 1549 aa25.1■■□□□ 1.61
NR4A1-201ENST00000243050 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
NR4A1-201ENST00000243050 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
NR4A1-201ENST00000243050 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
NR4A1-201ENST00000243050 NACADO15069 1562 aa23.89■■□□□ 1.41
NR4A1-201ENST00000243050 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
NR4A1-201ENST00000243050 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
NR4A1-201ENST00000243050 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
NR4A1-201ENST00000243050 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
NR4A1-201ENST00000243050 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
NR4A1-201ENST00000243050 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
NR4A1-201ENST00000243050 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
NR4A1-201ENST00000243050 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
NR4A1-201ENST00000243050 DNAJC5BQ9UF47 199 aa22.97■■□□□ 1.27
NR4A1-201ENST00000243050 CECR2Q9BXF3 1484 aa22.64■■□□□ 1.21
NR4A1-201ENST00000243050 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.21
NR4A1-201ENST00000243050 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
NR4A1-201ENST00000243050 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
NR4A1-201ENST00000243050 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
NR4A1-201ENST00000243050 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
NR4A1-201ENST00000243050 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
NR4A1-201ENST00000243050 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
NR4A1-201ENST00000243050 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
NR4A1-201ENST00000243050 NCAPD3P42695 1498 aa22.12■■□□□ 1.13
NR4A1-201ENST00000243050 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
NR4A1-201ENST00000243050 WIZO95785 1651 aa22.11■■□□□ 1.13
NR4A1-201ENST00000243050 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
NR4A1-201ENST00000243050 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
NR4A1-201ENST00000243050 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
NR4A1-201ENST00000243050 NESP48681 1621 aa21.76■■□□□ 1.07
NR4A1-201ENST00000243050 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
NR4A1-201ENST00000243050 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
NR4A1-201ENST00000243050 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
NR4A1-201ENST00000243050 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
NR4A1-201ENST00000243050 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
NR4A1-201ENST00000243050 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
NR4A1-201ENST00000243050 HRCP23327 699 aa21.52■■□□□ 1.04
NR4A1-201ENST00000243050 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
NR4A1-201ENST00000243050 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
NR4A1-201ENST00000243050 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
NR4A1-201ENST00000243050 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
NR4A1-201ENST00000243050 CFTRP13569 1480 aa21.43■■□□□ 1.02
NR4A1-201ENST00000243050 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
NR4A1-201ENST00000243050 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
NR4A1-201ENST00000243050 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
NR4A1-201ENST00000243050 EHMT2Q96KQ7 1210 aa21.32■■□□□ 1
NR4A1-201ENST00000243050 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
NR4A1-201ENST00000243050 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
NR4A1-201ENST00000243050 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
NR4A1-201ENST00000243050 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
NR4A1-201ENST00000243050 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
NR4A1-201ENST00000243050 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
NR4A1-201ENST00000243050 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
NR4A1-201ENST00000243050 CUX2O14529 1486 aa21.08■□□□□ 0.96
NR4A1-201ENST00000243050 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
NR4A1-201ENST00000243050 WDR62O43379 1518 aa21■□□□□ 0.95
NR4A1-201ENST00000243050 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
NR4A1-201ENST00000243050 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
NR4A1-201ENST00000243050 SOGA1O94964 1423 aa20.92■□□□□ 0.94
NR4A1-201ENST00000243050 CUX1P39880 1505 aa20.92■□□□□ 0.94
NR4A1-201ENST00000243050 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
NR4A1-201ENST00000243050 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
NR4A1-201ENST00000243050 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
NR4A1-201ENST00000243050 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
NR4A1-201ENST00000243050 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
NR4A1-201ENST00000243050 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
NR4A1-201ENST00000243050 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.93
NR4A1-201ENST00000243050 MYT1Q01538 1121 aa20.83■□□□□ 0.92
NR4A1-201ENST00000243050 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
NR4A1-201ENST00000243050 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
NR4A1-201ENST00000243050 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.92
NR4A1-201ENST00000243050 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
NR4A1-201ENST00000243050 FBLN2P98095 1184 aa20.73■□□□□ 0.91
NR4A1-201ENST00000243050 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
NR4A1-201ENST00000243050 EEA1Q15075 1411 aa20.7■□□□□ 0.9
NR4A1-201ENST00000243050 TOP2BQ02880 1626 aa20.69■□□□□ 0.9
NR4A1-201ENST00000243050 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
NR4A1-201ENST00000243050 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
NR4A1-201ENST00000243050 CEP162Q5TB80 1403 aa20.65■□□□□ 0.9
NR4A1-201ENST00000243050 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.89
NR4A1-201ENST00000243050 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
NR4A1-201ENST00000243050 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
NR4A1-201ENST00000243050 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
NR4A1-201ENST00000243050 GOLGA3Q08378 1498 aa20.58■□□□□ 0.89
NR4A1-201ENST00000243050 GAPVD1Q14C86 1478 aa20.56■□□□□ 0.88
NR4A1-201ENST00000243050 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
NR4A1-201ENST00000243050 TTBK1Q5TCY1 1321 aaPredicted RBP20.54■□□□□ 0.88
NR4A1-201ENST00000243050 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
NR4A1-201ENST00000243050 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
NR4A1-201ENST00000243050 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
NR4A1-201ENST00000243050 KIF21BO75037 1637 aa20.48■□□□□ 0.87
NR4A1-201ENST00000243050 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
NR4A1-201ENST00000243050 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
NR4A1-201ENST00000243050 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
NR4A1-201ENST00000243050 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
NR4A1-201ENST00000243050 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
NR4A1-201ENST00000243050 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
NR4A1-201ENST00000243050 IGF1RP08069 1367 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms