RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
IRF3-226ENST00000600453 CCDC180Q9P1Z9 1646 aa34.22■■■■□ 3.07
IRF3-226ENST00000600453 ABCC9O60706 1549 aa33.84■■■■□ 3.01
IRF3-226ENST00000600453 RB1CC1Q8TDY2 1594 aa32.45■■■□□ 2.78
IRF3-226ENST00000600453 NACADO15069 1562 aa32.33■■■□□ 2.77
IRF3-226ENST00000600453 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
IRF3-226ENST00000600453 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
IRF3-226ENST00000600453 ZCCHC6Q5VYS8 1495 aaKnown RBP31.82■■■□□ 2.68
IRF3-226ENST00000600453 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
IRF3-226ENST00000600453 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
IRF3-226ENST00000600453 UNC13AQ9UPW8 1703 aa31.57■■■□□ 2.64
IRF3-226ENST00000600453 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
IRF3-226ENST00000600453 BICRAQ9NZM4 1560 aa31.37■■■□□ 2.61
IRF3-226ENST00000600453 SCRIBQ14160 1630 aa31.14■■■□□ 2.58
IRF3-226ENST00000600453 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.57
IRF3-226ENST00000600453 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
IRF3-226ENST00000600453 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
IRF3-226ENST00000600453 CECR2Q9BXF3 1484 aa30.48■■■□□ 2.47
IRF3-226ENST00000600453 NCAPD3P42695 1498 aa29.85■■■□□ 2.37
IRF3-226ENST00000600453 SMARCA4P51532 1647 aa29.79■■■□□ 2.36
IRF3-226ENST00000600453 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
IRF3-226ENST00000600453 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
IRF3-226ENST00000600453 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
IRF3-226ENST00000600453 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
IRF3-226ENST00000600453 PEG3Q9GZU2 1588 aa29.53■■■□□ 2.32
IRF3-226ENST00000600453 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
IRF3-226ENST00000600453 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
IRF3-226ENST00000600453 ERCC6Q03468 1493 aa29.26■■■□□ 2.27
IRF3-226ENST00000600453 WIZO95785 1651 aa29.15■■■□□ 2.26
IRF3-226ENST00000600453 NESP48681 1621 aa29.13■■■□□ 2.25
IRF3-226ENST00000600453 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
IRF3-226ENST00000600453 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
IRF3-226ENST00000600453 CUX2O14529 1486 aa29.08■■■□□ 2.25
IRF3-226ENST00000600453 PDS5BQ9NTI5 1447 aa28.98■■■□□ 2.23
IRF3-226ENST00000600453 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
IRF3-226ENST00000600453 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
IRF3-226ENST00000600453 KIF21AQ7Z4S6 1674 aa28.76■■■□□ 2.19
IRF3-226ENST00000600453 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
IRF3-226ENST00000600453 CFTRP13569 1480 aa28.68■■■□□ 2.18
IRF3-226ENST00000600453 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
IRF3-226ENST00000600453 MRC2Q9UBG0 1479 aa28.62■■■□□ 2.17
IRF3-226ENST00000600453 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
IRF3-226ENST00000600453 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
IRF3-226ENST00000600453 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
IRF3-226ENST00000600453 WDR62O43379 1518 aa28.5■■■□□ 2.15
IRF3-226ENST00000600453 PRDM2Q13029 1718 aa28.37■■■□□ 2.13
IRF3-226ENST00000600453 URB2Q14146 1524 aaKnown RBP28.28■■■□□ 2.12
IRF3-226ENST00000600453 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
IRF3-226ENST00000600453 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
IRF3-226ENST00000600453 TOPBP1Q92547 1522 aa28.08■■■□□ 2.08
IRF3-226ENST00000600453 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
IRF3-226ENST00000600453 DNMBPQ6XZF7 1577 aa28■■■□□ 2.07
IRF3-226ENST00000600453 OSCARQ8IYS5 282 aa27.93■■■□□ 2.06
IRF3-226ENST00000600453 ZNF608Q9ULD9 1512 aaPredicted RBP27.85■■■□□ 2.05
IRF3-226ENST00000600453 POLA1P09884 1462 aaPredicted RBP27.8■■■□□ 2.04
IRF3-226ENST00000600453 SOGA1O94964 1423 aa27.76■■■□□ 2.04
IRF3-226ENST00000600453 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
IRF3-226ENST00000600453 AQRO60306 1485 aaKnown RBP eCLIP27.71■■■□□ 2.032e-9■■■■□ 26.5
IRF3-226ENST00000600453 EIF4G3O43432 1585 aaKnown RBP27.7■■■□□ 2.03
IRF3-226ENST00000600453 FGD5Q6ZNL6 1462 aa27.69■■■□□ 2.02
IRF3-226ENST00000600453 CUX1P39880 1505 aa27.68■■■□□ 2.02
IRF3-226ENST00000600453 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
IRF3-226ENST00000600453 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
IRF3-226ENST00000600453 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
IRF3-226ENST00000600453 FBLN2P98095 1184 aa27.55■■■□□ 2
IRF3-226ENST00000600453 TRIM41Q8WV44 630 aa27.54■■■□□ 2
IRF3-226ENST00000600453 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
IRF3-226ENST00000600453 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
IRF3-226ENST00000600453 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
IRF3-226ENST00000600453 CHD1O14646 1710 aa27.43■■□□□ 1.98
IRF3-226ENST00000600453 ABCA10Q8WWZ4 1543 aa27.42■■□□□ 1.98
IRF3-226ENST00000600453 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
IRF3-226ENST00000600453 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
IRF3-226ENST00000600453 SNAPC4Q5SXM2 1469 aa27.4■■□□□ 1.98
IRF3-226ENST00000600453 TOP2BQ02880 1626 aa27.39■■□□□ 1.98
IRF3-226ENST00000600453 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
IRF3-226ENST00000600453 RIMBP3CA6NJZ7 1639 aa27.32■■□□□ 1.96
IRF3-226ENST00000600453 RIMBP3BA6NNM3 1639 aa27.32■■□□□ 1.96
IRF3-226ENST00000600453 RIMBP3Q9UFD9 1639 aa27.32■■□□□ 1.96
IRF3-226ENST00000600453 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
IRF3-226ENST00000600453 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
IRF3-226ENST00000600453 SYNJ1O43426 1573 aa27.3■■□□□ 1.96
IRF3-226ENST00000600453 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
IRF3-226ENST00000600453 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
IRF3-226ENST00000600453 CYB5RLQ6IPT4 315 aa27.19■■□□□ 1.94
IRF3-226ENST00000600453 CLASP1Q7Z460 1538 aa27.14■■□□□ 1.94
IRF3-226ENST00000600453 ERICH3Q5RHP9 1530 aa27.11■■□□□ 1.93
IRF3-226ENST00000600453 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
IRF3-226ENST00000600453 GRIN2AQ12879 1464 aa27.07■■□□□ 1.92
IRF3-226ENST00000600453 ADAMTS12P58397 1594 aa27.04■■□□□ 1.92
IRF3-226ENST00000600453 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
IRF3-226ENST00000600453 NUP160Q12769 1436 aa26.97■■□□□ 1.91
IRF3-226ENST00000600453 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
IRF3-226ENST00000600453 CEP170Q5SW79 1584 aa26.88■■□□□ 1.89
IRF3-226ENST00000600453 IGF1RP08069 1367 aa26.87■■□□□ 1.89
IRF3-226ENST00000600453 JPH4Q96JJ6 628 aa26.8■■□□□ 1.88
IRF3-226ENST00000600453 TRHP20396 242 aaPredicted RBP26.79■■□□□ 1.88
IRF3-226ENST00000600453 CUL7Q14999 1698 aa26.76■■□□□ 1.87
IRF3-226ENST00000600453 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
IRF3-226ENST00000600453 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms