RNA–Protein interactions for RNA: ENST00000417766.5

LSP1-205, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5

Gene LSP1, Length 887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-205ENST00000417766 NISCHQ9Y2I1 1504 aa41.65■■■■■ 4.26
LSP1-205ENST00000417766 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
LSP1-205ENST00000417766 ABCC9O60706 1549 aa36.37■■■■□ 3.41
LSP1-205ENST00000417766 RB1CC1Q8TDY2 1594 aa34.86■■■■□ 3.17
LSP1-205ENST00000417766 NACADO15069 1562 aa34.84■■■■□ 3.17
LSP1-205ENST00000417766 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
LSP1-205ENST00000417766 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
LSP1-205ENST00000417766 DCAF8L2P0C7V8 631 aa34.56■■■■□ 3.12
LSP1-205ENST00000417766 DCAF1Q9Y4B6 1507 aa34.54■■■■□ 3.12
LSP1-205ENST00000417766 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
LSP1-205ENST00000417766 PABPN1Q86U42 306 aaKnown RBP eCLIP33.93■■■■□ 3.02
LSP1-205ENST00000417766 BICRAQ9NZM4 1560 aa33.88■■■■□ 3.01
LSP1-205ENST00000417766 DNAJC5BQ9UF47 199 aa33.76■■■□□ 2.99
LSP1-205ENST00000417766 SCRIBQ14160 1630 aa33.74■■■□□ 2.99
LSP1-205ENST00000417766 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.96
LSP1-205ENST00000417766 EIF4G1Q04637 1599 aaKnown RBP32.96■■■□□ 2.87
LSP1-205ENST00000417766 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
LSP1-205ENST00000417766 CECR2Q9BXF3 1484 aa32.7■■■□□ 2.83
LSP1-205ENST00000417766 SMARCA4P51532 1647 aa32.34■■■□□ 2.77
LSP1-205ENST00000417766 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
LSP1-205ENST00000417766 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
LSP1-205ENST00000417766 NCAPD3P42695 1498 aa32.11■■■□□ 2.73
LSP1-205ENST00000417766 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
LSP1-205ENST00000417766 MROH2BQ7Z745 1585 aa32.07■■■□□ 2.72
LSP1-205ENST00000417766 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
LSP1-205ENST00000417766 HMGXB3Q12766 1538 aa32■■■□□ 2.71
LSP1-205ENST00000417766 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
LSP1-205ENST00000417766 WIZO95785 1651 aa31.76■■■□□ 2.67
LSP1-205ENST00000417766 RSF1Q96T23 1441 aaPredicted RBP31.7■■■□□ 2.67
LSP1-205ENST00000417766 NESP48681 1621 aa31.43■■■□□ 2.62
LSP1-205ENST00000417766 TOP2AP11388 1531 aaKnown RBP31.43■■■□□ 2.62
LSP1-205ENST00000417766 ERCC6Q03468 1493 aa31.3■■■□□ 2.6
LSP1-205ENST00000417766 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
LSP1-205ENST00000417766 CADPSQ9ULU8 1353 aa31.14■■■□□ 2.58
LSP1-205ENST00000417766 CUX2O14529 1486 aa31.12■■■□□ 2.57
LSP1-205ENST00000417766 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
LSP1-205ENST00000417766 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
LSP1-205ENST00000417766 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
LSP1-205ENST00000417766 CCDC88BA6NC98 1476 aa31.01■■■□□ 2.55
LSP1-205ENST00000417766 CFTRP13569 1480 aa30.99■■■□□ 2.55
LSP1-205ENST00000417766 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
LSP1-205ENST00000417766 FANCD2Q9BXW9 1451 aa30.77■■■□□ 2.52
LSP1-205ENST00000417766 SUPT5HO00267 1087 aaKnown RBP30.76■■■□□ 2.51
LSP1-205ENST00000417766 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
LSP1-205ENST00000417766 MRC2Q9UBG0 1479 aa30.74■■■□□ 2.51
LSP1-205ENST00000417766 WDR62O43379 1518 aa30.68■■■□□ 2.5
LSP1-205ENST00000417766 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
LSP1-205ENST00000417766 URB2Q14146 1524 aaKnown RBP30.49■■■□□ 2.47
LSP1-205ENST00000417766 ABCC8Q09428 1581 aa30.35■■■□□ 2.45
LSP1-205ENST00000417766 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
LSP1-205ENST00000417766 TOPBP1Q92547 1522 aa30.31■■■□□ 2.44
LSP1-205ENST00000417766 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
LSP1-205ENST00000417766 CUX1P39880 1505 aa30.1■■■□□ 2.41
LSP1-205ENST00000417766 POLA1P09884 1462 aaPredicted RBP30.05■■■□□ 2.4
LSP1-205ENST00000417766 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
LSP1-205ENST00000417766 ZNF608Q9ULD9 1512 aaPredicted RBP30.04■■■□□ 2.4
LSP1-205ENST00000417766 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
LSP1-205ENST00000417766 BIVM-ERCC5R4GMW8 1640 aa29.92■■■□□ 2.38
LSP1-205ENST00000417766 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
LSP1-205ENST00000417766 TOP2BQ02880 1626 aa29.89■■■□□ 2.38
LSP1-205ENST00000417766 SOGA1O94964 1423 aa29.88■■■□□ 2.37
LSP1-205ENST00000417766 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
LSP1-205ENST00000417766 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
LSP1-205ENST00000417766 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
LSP1-205ENST00000417766 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
LSP1-205ENST00000417766 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
LSP1-205ENST00000417766 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
LSP1-205ENST00000417766 ABCA10Q8WWZ4 1543 aa29.72■■■□□ 2.35
LSP1-205ENST00000417766 TDRD9Q8NDG6 1382 aaKnown RBP29.68■■■□□ 2.34
LSP1-205ENST00000417766 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
LSP1-205ENST00000417766 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
LSP1-205ENST00000417766 GRIN2BQ13224 1484 aa29.57■■■□□ 2.32
LSP1-205ENST00000417766 GAPVD1Q14C86 1478 aa29.57■■■□□ 2.32
LSP1-205ENST00000417766 CHD1O14646 1710 aa29.57■■■□□ 2.32
LSP1-205ENST00000417766 MAGI1Q96QZ7 1491 aaPredicted RBP29.53■■■□□ 2.32
LSP1-205ENST00000417766 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
LSP1-205ENST00000417766 FBLN2P98095 1184 aa29.39■■■□□ 2.3
LSP1-205ENST00000417766 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
LSP1-205ENST00000417766 RIMBP3CA6NJZ7 1639 aa29.38■■■□□ 2.29
LSP1-205ENST00000417766 RIMBP3BA6NNM3 1639 aa29.38■■■□□ 2.29
LSP1-205ENST00000417766 RIMBP3Q9UFD9 1639 aa29.38■■■□□ 2.29
LSP1-205ENST00000417766 ERICH3Q5RHP9 1530 aa29.38■■■□□ 2.29
LSP1-205ENST00000417766 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
LSP1-205ENST00000417766 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
LSP1-205ENST00000417766 ARHGEF11O15085 1522 aa29.33■■■□□ 2.29
LSP1-205ENST00000417766 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
LSP1-205ENST00000417766 KIF27Q86VH2 1401 aa29.26■■■□□ 2.27
LSP1-205ENST00000417766 CLASP1Q7Z460 1538 aa29.25■■■□□ 2.27
LSP1-205ENST00000417766 FHAD1B1AJZ9 1412 aa29.23■■■□□ 2.27
LSP1-205ENST00000417766 GRIN2AQ12879 1464 aa29.2■■■□□ 2.26
LSP1-205ENST00000417766 CUL7Q14999 1698 aa29.15■■■□□ 2.26
LSP1-205ENST00000417766 IGF1RP08069 1367 aa29.13■■■□□ 2.25
LSP1-205ENST00000417766 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
LSP1-205ENST00000417766 NUP160Q12769 1436 aa29.09■■■□□ 2.25
LSP1-205ENST00000417766 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
LSP1-205ENST00000417766 CYB5RLQ6IPT4 315 aa29.02■■■□□ 2.24
LSP1-205ENST00000417766 RUSC2Q8N2Y8 1516 aa28.97■■■□□ 2.23
LSP1-205ENST00000417766 CARMIL1Q5VZK9 1371 aa28.93■■■□□ 2.22
LSP1-205ENST00000417766 SHROOM2Q13796 1616 aa28.93■■■□□ 2.22
LSP1-205ENST00000417766 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms